Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for casc3

Gene Name Gene ID Reads Annotation
casc3 ENSDARG00000029911 1174 casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]










Genes with expression patterns similar to casc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casc3 ENSDARG00000029911 1174 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
2. arhgap11a ENSDARG00000100019 1642 3.045 - 0.846 - - - 0.744 0.705 - 0.750 Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
3. nfybb ENSDARG00000045611, ENSDARG00000110926 350 2.351 0.745 - - - - 0.883 0.723 - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
4. CR354611.2 CR354611.2 2040 2.267 - 0.795 - - - 0.725 0.747 - -
5. ca16b ENSDARG00000060123 389 1.737 - 0.853 - - - 0.884 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
6. KCTD14 ENSDARG00000110240 122 1.728 - 0.863 - - - 0.865 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
7. rac3b ENSDARG00000020795 1523 1.71 - 0.894 - - - 0.816 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
8. sall4 ENSDARG00000044485 1694 1.691 - - - - - 0.864 0.827 - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
9. C18H16orf70 C18H16orf70 542 1.684 - 0.866 - - - 0.818 - - -
10. nsmaf ENSDARG00000051920 474 1.682 - - - - - 0.859 0.823 - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:ZFIN;Acc:ZDB-GENE-050417-342]
11. pvrl1b 1645 1.669 - 0.879 - - - - 0.790 - - poliovirus receptor-related 1b
12. nin ENSDARG00000060298 1558 1.669 - - - - - 0.870 0.799 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
13. prelid1b ENSDARG00000044169 501 1.664 - 0.818 - - - 0.846 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
14. tapbp tapbp 70 1.653 - - - - - 0.902 0.751 - -
15. NRBP2 NRBP2 127 1.652 - 0.824 - - - 0.828 - - -
16. azi1_1 azi1_1 1375 1.651 - 0.846 - - - - 0.805 - -
17. dctn5 ENSDARG00000003573 1100 1.651 - - - - - 0.908 0.743 - - dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
18. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.641 - - - - - 0.868 0.773 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
19. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.639 - - - - - 0.761 0.878 - - DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
20. GANAB_2 GANAB_2 3210 1.638 - - - - - 0.811 0.827 - -
21. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.636 - 0.806 - - - - 0.830 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
22. nme6 ENSDARG00000016138 207 1.631 - 0.836 - - - 0.795 - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
23. BX470254.1_1 ENSDARG00000097402 50 1.628 - - - - - 0.895 0.733 - -
24. MSL1_1 MSL1_1 2365 1.627 - - - - - 0.853 0.774 - -
25. espl1 ENSDARG00000075354 818 1.626 - - - - - 0.919 - 0.707 - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
26. uros ENSDARG00000027491 1147 1.625 - - - - - 0.887 0.738 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
27. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.621 - 0.860 - - - 0.761 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
28. popdc3 ENSDARG00000058551 538 1.616 - - - - - 0.804 0.812 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
29. zfyve27 ENSDARG00000059835 604 1.616 - 0.826 - - - - 0.790 - - zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]
30. nck1b ENSDARG00000075369 1596 1.615 - - - - - 0.753 0.862 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
31. usp1 ENSDARG00000056414 1816 1.611 - 0.856 - - - 0.755 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
32. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 1.609 - 0.853 - - - - - 0.756 - BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
33. phip ENSDARG00000015970 1080 1.607 - 0.769 - - - - 0.838 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
34. zbtb4 ENSDARG00000105255 362 1.603 - 0.849 - - - - 0.754 - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
35. adck1 ENSDARG00000062561 22 1.6 - - - - - 0.893 0.707 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
36. daxx ENSDARG00000000729 734 1.598 - - - - - 0.873 0.725 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
37. dctn4 ENSDARG00000023988 860 1.598 - 0.722 - - - 0.876 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
38. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.597 - 0.841 - - - - 0.756 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
39. tox4 tox4 1671 1.595 - - - - - 0.831 - 0.764 -
40. pcnxl4 377 1.594 - 0.862 - - - 0.732 - - - pecanex-like 4 (Drosophila), transcript variant X2
41. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.593 - 0.765 - - - - 0.828 - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
42. si:ch211-194k22.8 ENSDARG00000096711 1318 1.592 - - - - - 0.870 0.722 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
43. cib1 ENSDARG00000103118 291 1.592 - 0.783 - - - 0.809 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
44. ptgs2a ENSDARG00000004539 1207 1.587 - 0.800 - - - 0.787 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
45. casp7 ENSDARG00000091836 657 1.586 - 0.877 - - - - 0.709 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
46. chmp3 ENSDARG00000038064 577 1.585 - - - - - 0.793 0.792 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
47. fam43a ENSDARG00000043009 792 1.584 - 0.856 - - - 0.728 - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
48. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.583 0.710 - - - - 0.873 - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
49. elk1 ENSDARG00000078066 414 1.581 0.705 - - - - 0.876 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
50. sppl2 ENSDARG00000030448 1040 1.572 - 0.867 - - - 0.705 - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
51. bub1bb ENSDARG00000074927 1667 1.567 - 0.716 - - - 0.851 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
52. aldh16a1 ENSDARG00000037935 617 1.566 - 0.851 - - - - 0.715 - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
53. zic5 ENSDARG00000016022 1034 1.564 - 0.840 - - - 0.724 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
54. asnsd1 830 1.563 - - - - - 0.800 0.763 - - asparagine synthetase domain containing 1, transcript variant X1
55. gpsm1b ENSDARG00000054874 1308 1.562 - - - - - 0.819 - 0.743 - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
56. tubg1 ENSDARG00000015610 2433 1.556 - 0.842 - - - 0.714 - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
57. ino80db ENSDARG00000062226 504 1.552 - 0.802 - - - 0.750 - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
58. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.552 - 0.768 - - - - 0.784 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
59. ebag9 ENSDARG00000040021 2217 1.548 - - - - - 0.821 0.727 - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
60. ARHGAP23 ARHGAP23 3946 1.541 - 0.766 - - - 0.775 - - -
61. slbp ENSDARG00000100558 3405 1.54 - 0.787 - - - - 0.753 - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
62. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.536 - 0.701 - - - 0.835 - - - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
63. LIMD2 ENSDARG00000078092 3414 1.536 - 0.741 - - - - 0.795 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
64. CR855306.1 ENSDARG00000099475 102 1.535 - - - - - 0.826 0.709 - -
65. gltpd1 gltpd1 377 1.532 - - - - - 0.803 0.729 - -
66. GID4 ENSDARG00000079482 1375 1.532 0.727 0.805 - - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
67. zcchc10 ENSDARG00000091092 1333 1.531 - - - - - 0.789 0.742 - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
68. CLDN23 CLDN23 2002 1.53 - 0.786 - - - - 0.744 - -
69. smcr8a ENSDARG00000052818 559 1.53 - - - - - 0.798 0.732 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
70. sap130a ENSDARG00000056924 3156 1.528 - 0.816 - - - - - 0.712 - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
71. sf3b3_1 ENSDARG00000103553 1191 1.527 - 0.704 - - - 0.823 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
72. phf3 ENSDARG00000034768 1372 1.525 0.701 - - - - 0.824 - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
73. mafg2 mafg2 1041 1.525 - - - - - 0.750 - 0.775 -
74. map3k7 ENSDARG00000020469 2845 1.52 - 0.780 - - - - 0.740 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
75. GSG2 GSG2 1162 1.52 - - - - - 0.800 0.720 - -
76. ARFGAP1 ENSDARG00000101616 2952 1.518 - 0.799 - - - 0.719 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
77. POLDIP3 ENSDARG00000099375 832 1.518 - 0.769 - - - - 0.749 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
78. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.514 - - - - - 0.790 - 0.724 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
79. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.513 - 0.775 - - - - 0.738 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
80. CR548630.1 CR548630.1 3301 1.513 0.709 0.804 - - - - - - -
81. cwc25 ENSDARG00000003382 2134 1.513 - - - - - 0.799 0.714 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
82. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.512 - - - - - 0.740 0.772 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
83. ccnt1 ENSDARG00000017525 1888 1.504 0.765 - - - - - 0.739 - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
84. ppp1r14bb ENSDARG00000030161 2349 1.502 - 0.790 - - - 0.712 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
85. CABZ01057907.1 CABZ01057907.1 1140 1.5 - - - - - - 0.784 0.716 -
86. appbp2 ENSDARG00000007566 1961 1.495 - 0.758 - 0.737 - - - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
87. suv39h1b ENSDARG00000055753 1540 1.488 - - - - - 0.730 0.758 - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
88. BX465851.1 BX465851.1 237 1.486 - - - - - 0.737 0.749 - -
89. CR848664.2 CR848664.2 876 1.485 - - - - - 0.742 0.743 - -
90. aurkb ENSDARG00000037640 4874 1.485 - - - - - 0.716 0.769 - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
91. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.485 - - - - - 0.783 0.702 - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
92. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.48 - 0.701 - - - - 0.779 - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
93. zgc:113442 ENSDARG00000101906 3092 1.478 - 0.711 - - - - 0.767 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
94. SYMPK ENSDARG00000059553 1159 1.475 - - - - - 0.741 - 0.734 - symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
95. mia2 ENSDARG00000099973 139 1.471 - 0.750 - - - - 0.721 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
96. MIER3_1 MIER3_1 756 1.469 - - - - - 0.722 0.747 - -
97. EHBP1 ENSDARG00000043643 966 1.469 0.730 - - - - 0.739 - - - EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
98. CABZ01028770.1 ENSDARG00000099506 700 1.467 0.736 - - - - - 0.731 - - ras-related C3 botulinum toxin substrate 1-like [Source:NCBI gene;Acc:100537765]
99. rcor3 ENSDARG00000004502 680 1.455 - - - - - - 0.720 0.735 - REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-050208-371]
100. ube2g2 ENSDARG00000025404 1774 1.453 - 0.711 - - - - 0.742 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]

There are 2138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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