Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for casc1

Gene Name Gene ID Reads Annotation
casc1 ENSDARG00000016815 99 cancer susceptibility candidate 1 [Source:ZFIN;Acc:ZDB-GENE-041210-153]










Genes with expression patterns similar to casc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. casc1 ENSDARG00000016815 99 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cancer susceptibility candidate 1 [Source:ZFIN;Acc:ZDB-GENE-041210-153]
2. dnah5 ENSDARG00000087373 168 2.195 0.708 - - - - - 0.725 - 0.762 dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
3. cx32.3 ENSDARG00000041787 33 1.879 - 0.971 - - - - 0.908 - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
4. si:dkey-6o1.2 si:dkey-6o1.2 12 1.814 - 0.971 - - - - 0.843 - -
5. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.814 - 0.971 - - - - 0.843 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
6. ms4a17a.2 ENSDARG00000105674 32 1.814 - 0.971 - - - - 0.843 - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
7. si:ch211-165l15.1 si:ch211-165l15.1 10 1.814 - 0.971 - - - - 0.843 - -
8. stx11a ENSDARG00000044039 39 1.813 - 0.971 - - - - - - 0.842 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
9. tmprss13b ENSDARG00000077573 47 1.802 - 0.959 - - - - 0.843 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
10. ccrl1a ccrl1a 40 1.799 - 0.969 - - - - - - 0.830
11. C5H9orf117 C5H9orf117 88 1.765 - 0.932 - - - - - - 0.833
12. C10H11orf63 C10H11orf63 65 1.712 - 0.887 - - - - 0.825 - -
13. klhl26 ENSDARG00000053876 48 1.69 - 0.971 - - - 0.719 - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
14. IQCG ENSDARG00000068678 77 1.672 - 0.829 - - - - 0.843 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
15. acsl3a ENSDARG00000032079 897 1.661 - 0.803 - - - - - - 0.858 acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
16. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.648 - 0.897 - - - - - - 0.751 signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
17. CRFA31.2 CRFA31.2 12 1.647 - 0.874 - - 0.773 - - - -
18. si:dkey-202i12.5 si:dkey-202i12.5 20 1.614 - - - - 0.771 - 0.843 - -
19. zgc:165481 ENSDARG00000060092 95 1.613 - - - - 0.766 - - - 0.847 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
20. zgc:152968 ENSDARG00000037002 6 1.612 - - - - 0.769 - 0.843 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
21. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 1.61 - 0.888 - - - - - - 0.722 adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
22. rictora ENSDARG00000100867 20 1.604 - - - - 0.761 - 0.843 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
23. si:dkey-125i10.3 ENSDARG00000094760 908 1.601 - 0.812 - - - - - - 0.789 si:dkey-125i10.3 [Source:ZFIN;Acc:ZDB-GENE-060526-198]
24. valopa ENSDARG00000021150 71 1.596 0.753 - - - - - 0.843 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
25. BX890577.1 BX890577.1 257 1.584 - 0.766 - - - - - - 0.818
26. OVOL1 75 1.582 - 0.739 - - - - 0.843 - - ovo-like zinc finger 1, transcript variant X1
27. si:ch211-274p24.4 ENSDARG00000087088 36 1.573 - - - - 0.739 - 0.834 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
28. BBX ENSDARG00000012699 79 1.571 - 0.728 - - - - 0.843 - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
29. TULP1 TULP1 50 1.567 - - - - 0.724 - 0.843 - -
30. C5H9orf171 C5H9orf171 34 1.565 - - - - - - 0.717 - 0.848
31. si:dkey-242k1.6 ENSDARG00000101205 112 1.561 - 0.773 - - - - 0.788 - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
32. BX649554.3_1 BX649554.3_1 1071 1.547 - - - - 0.707 - - - 0.840
33. si:ch211-254n4.3 ENSDARG00000020292 85 1.537 - 0.800 - - - - 0.737 - - si:ch211-254n4.3 [Source:ZFIN;Acc:ZDB-GENE-081105-89]
34. mpx ENSDARG00000019521 562 1.531 - 0.751 - - - - 0.780 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
35. CABZ01077217.1_1 ENSDARG00000079145 184 1.529 - - - - - - 0.748 - 0.781 uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
36. SRR SRR 544 1.528 - 0.719 - - - - - - 0.809
37. si:rp71-1i20.2 ENSDARG00000043198 113 1.525 - 0.734 - - - - - - 0.791 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
38. spata6l ENSDARG00000004874 149 1.514 - - - - - 0.744 - - 0.770 spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
39. ZBTB41 ENSDARG00000054984 464 1.513 - 0.769 - - - - - - 0.744 zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
40. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.511 0.783 - - - - - 0.728 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
41. adm2a ENSDARG00000045708, ENSDARG00000111740 246 1.509 - - - - 0.709 - - - 0.800 adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
42. msgn1 ENSDARG00000070546 188 1.499 - - - - 0.762 - 0.737 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
43. clock3 clock3 136 1.486 - 0.745 - - - 0.741 - - -
44. si:ch211-236p5.3 ENSDARG00000086418 138 1.461 - - - - - - 0.708 - 0.753 si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
45. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.451 - 0.711 - - 0.740 - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
46. snx8a ENSDARG00000074842 411 1.407 - - - - - - 0.705 - 0.702 sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
47. MEX3C 476 0.977 - 0.977 - - - - - - - mex-3 RNA binding family member C
48. gpr37b ENSDARG00000033296 283 0.977 - 0.977 - - - - - - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
49. CR388046.3 ENSDARG00000105537 108 0.975 - 0.975 - - - - - - -
50. TBC1D17 ENSDARG00000005927 163 0.975 - 0.975 - - - - - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
51. cox4i1l ENSDARG00000012388 584 0.975 - 0.975 - - - - - - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
52. dkk2 ENSDARG00000076420 553 0.974 - 0.974 - - - - - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
53. lygl1 ENSDARG00000056874 309 0.973 - 0.973 - - - - - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
54. tmem79b ENSDARG00000076861 154 0.972 - 0.972 - - - - - - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
55. dyx1c1 dyx1c1 36 0.971 - 0.971 - - - - - - -
56. shisa3 ENSDARG00000075467 485 0.971 - 0.971 - - - - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
57. PLCXD1_2 PLCXD1_2 9 0.971 - 0.971 - - - - - - -
58. si:dkey-185p13.1 ENSDARG00000095837 12 0.971 - 0.971 - - - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
59. BX005421.4 BX005421.4 11 0.971 - 0.971 - - - - - - -
60. si:dkeyp-53d3.3 ENSDARG00000098664 65 0.971 - 0.971 - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
61. slc8a1a ENSDARG00000013422 12 0.971 - 0.971 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
62. AL954698.1 ENSDARG00000098202 377 0.971 - 0.971 - - - - - - -
63. IKZF4 ENSDARG00000037068 36 0.971 - 0.971 - - - - - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
64. si:dkey-233e3.1 si:dkey-233e3.1 7 0.971 - 0.971 - - - - - - -
65. BX537137.1 ENSDARG00000092436 77 0.971 - 0.971 - - - - - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
66. BX511061.2 BX511061.2 30 0.971 - 0.971 - - - - - - -
67. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 0.971 - 0.971 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
68. cyp2k18 ENSDARG00000104593 27 0.971 - 0.971 - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
69. zgc:114123 ENSDARG00000044956 9 0.971 - 0.971 - - - - - - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
70. bik ENSDARG00000045549 18 0.971 - 0.971 - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
71. si:dkey-229d11.5 ENSDARG00000094392 33 0.971 - 0.971 - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
72. CABZ01084613.1 CABZ01084613.1 22 0.971 - 0.971 - - - - - - -
73. RGS14 RGS14 15 0.971 - 0.971 - - - - - - -
74. ZNF70_14 ZNF70_14 19 0.971 - 0.971 - - - - - - -
75. BX928744.1 BX928744.1 15 0.971 - 0.971 - - - - - - -
76. MAPKBP1 ENSDARG00000103746 4 0.971 - 0.971 - - - - - - - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
77. CMA1_8 CMA1_8 10 0.971 - 0.971 - - - - - - -
78. gata4 ENSDARG00000098952 11 0.971 - 0.971 - - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
79. zgc:175008 zgc:175008 55 0.971 - 0.971 - - - - - - -
80. CR735107.1 CR735107.1 6 0.971 - 0.971 - - - - - - -
81. lrch4 ENSDARG00000068258 24 0.971 - 0.971 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
82. cadm1b ENSDARG00000042677 277 0.971 - 0.971 - - - - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
83. als2a ENSDARG00000075111 29 0.971 - 0.971 - - - - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
84. CR457462.1 CR457462.1 11 0.971 - 0.971 - - - - - - -
85. TMEM246 ENSDARG00000061553 168 0.969 - 0.969 - - - - - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
86. SLITRK6 ENSDARG00000098769 217 0.969 - 0.969 - - - - - - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
87. CU104716.2 CU104716.2 10 0.969 - 0.969 - - - - - - -
88. GFOD1 ENSDARG00000061363 67 0.969 - 0.969 - - - - - - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
89. ADAM12 ENSDARG00000116062 35 0.969 - 0.969 - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
90. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 0.969 - 0.969 - - - - - - - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
91. CABZ01079015.1 CABZ01079015.1 10 0.969 - 0.969 - - - - - - -
92. ppa1a ENSDARG00000099933 31 0.969 - 0.969 - - - - - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
93. NFAT5 NFAT5 62 0.969 - 0.969 - - - - - - -
94. CABZ01070852.2 ENSDARG00000114999 16 0.969 - 0.969 - - - - - - -
95. slc27a6 ENSDARG00000046053 57 0.967 - 0.967 - - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
96. hs3st1l2 ENSDARG00000035578 279 0.967 - 0.967 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
97. bivm ENSDARG00000061409, ENSDARG00000111376 25 0.966 - 0.966 - - - - - - - basic, immunoglobulin-like variable motif containing [Source:ZFIN;Acc:ZDB-GENE-010822-3]
98. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.966 - 0.966 - - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
99. zgc:172120 ENSDARG00000069199 278 0.963 - - - - - - - - 0.963 zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
100. SPAG17 SPAG17 31 0.962 - 0.962 - - - - - - -

There are 1279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA