Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cart1

Gene Name Gene ID Reads Annotation
cart1 ENSDARG00000070930 46 cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]










Genes with expression patterns similar to cart1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cart1 ENSDARG00000070930 46 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
2. zbtb25 ENSDARG00000042383 94 2 1.000 1.000 - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
3. si:ch73-189n23.1 ENSDARG00000086247 15 2 - 1.000 - - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
4. fgf10b ENSDARG00000100475 17 1.976 1.000 - - - - - 0.976 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
5. si:ch211-235f12.2 ENSDARG00000092119 31 1.877 0.956 0.921 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
6. mctp1b ENSDARG00000060871 20 1.854 - 0.921 - - - - 0.933 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
7. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.789 0.865 - - - - - 0.924 - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
8. si:dkey-261l7.2 ENSDARG00000094345 51 1.786 0.786 - - - - - 1.000 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
9. rxrga ENSDARG00000005593 342 1.767 1.000 0.767 - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
10. rdh14a ENSDARG00000039299 79 1.716 - 0.778 - - - - 0.938 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
11. kcnt1 ENSDARG00000079484 45 1.715 - 0.921 - - - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
12. g6pc3 ENSDARG00000020371 152 1.713 0.866 - - - - - 0.847 - - glucose 6 phosphatase, catalytic, 3 [Source:ZFIN;Acc:ZDB-GENE-061215-19]
13. si:dkey-189o20.1 si:dkey-189o20.1 47 1.69 0.940 - - - - - 0.750 - -
14. FANCA ENSDARG00000098241 39 1.679 - 0.921 - - - - 0.758 - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
15. si:ch211-63o20.7 ENSDARG00000042000 93 1.648 - 0.715 - - - - 0.933 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
16. BICC1 BICC1 264 1.644 0.790 0.854 - - - - - - -
17. btr18 ENSDARG00000103618 39 1.641 - 0.835 - - - - 0.806 - - bloodthirsty-related gene family, member 18 [Source:ZFIN;Acc:ZDB-GENE-080213-2]
18. si:dkey-22i16.9 ENSDARG00000095949 16 1.637 0.716 0.921 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
19. fam217b ENSDARG00000088505 104 1.614 0.911 0.703 - - - - - - - family with sequence similarity 217, member B [Source:ZFIN;Acc:ZDB-GENE-090313-236]
20. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 1.613 0.873 - - - - - 0.740 - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
21. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.596 0.786 - - - - - - - 0.810 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
22. GABRA2_1 ENSDARG00000113737 5 1.588 0.866 - - - - - - - 0.722 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
23. C21H11orf82 C21H11orf82 50 1.579 0.723 - - - - - 0.856 - -
24. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.572 - 0.836 - - - - 0.736 - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
25. CABZ01088930.1 CABZ01088930.1 20 1.561 - 0.759 - - - - - - 0.802
26. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 1.557 0.708 0.849 - - - - - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
27. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1.547 0.816 0.731 - - - - - - -
28. zgc:194314 zgc:194314 982 1.546 - - - - - - 0.787 - 0.759
29. CT573263.1 ENSDARG00000112940 108 1.531 - 0.727 - - - - 0.804 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
30. si:ch73-191k20.3 ENSDARG00000094206 104 1.522 0.778 0.744 - - - - - - - si:ch73-191k20.3 [Source:ZFIN;Acc:ZDB-GENE-090312-62]
31. ebpl ENSDARG00000036636 79 1.517 0.745 - - - - - 0.772 - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
32. LPIN1 ENSDARG00000020239, ENSDARG00000112314 75 1.486 0.768 0.718 - - - - - - - lipin 1 [Source:ZFIN;Acc:ZDB-GENE-080722-2]
33. slc25a18 ENSDARG00000070717 787 1.485 0.766 - - - - - 0.719 - - solute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
34. gdf6a ENSDARG00000053479 121 1.472 - 0.764 - - - - 0.708 - - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
35. CPXM1 CPXM1 201 1.451 0.707 0.744 - - - - - - -
36. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
37. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
38. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
39. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
40. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
41. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
42. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
43. pxn pxn 10 1 - - - - - - 1.000 - -
44. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
45. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
46. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
47. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
48. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
49. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
50. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
51. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
52. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
53. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
54. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
55. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
56. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
57. zgc:109965 ENSDARG00000012126 11 1 - 1.000 - - - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
58. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
59. bcl11aa ENSDARG00000061352 61 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
60. CR387932.1 ENSDARG00000097344 2 1 - - - - - - 1.000 - -
61. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
62. MMP20 MMP20 1 1 - - - - - - 1.000 - -
63. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
64. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
65. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
66. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
67. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
68. CR855327.1 CR855327.1 6 1 - 1.000 - - - - - - -
69. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
70. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
71. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - - 1.000 - -
72. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
73. GALNTL6 ENSDARG00000040048 33 1 - - - - - - 1.000 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
74. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
75. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
76. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
77. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
78. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
79. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
80. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
81. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
82. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
83. IYD IYD 8 1 - - - - - - 1.000 - -
84. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
85. si:ch211-218m3.16 ENSDARG00000044336 33 1 - - - - - - 1.000 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
86. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
87. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
88. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
89. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
90. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
91. si:ch73-77n15.1 si:ch73-77n15.1 2 1 - - - - - - 1.000 - -
92. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - - - - - 1.000 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
93. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
94. top3b ENSDARG00000027586 8 1 - - - - - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
95. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
96. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
97. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
98. dnm3 dnm3 45 1 1.000 - - - - - - - -
99. TOR4A TOR4A 70 1 1.000 - - - - - - - -
100. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]

There are 1002 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA