Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for card9

Gene Name Gene ID Reads Annotation
card9 ENSDARG00000067672 33 caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]










Genes with expression patterns similar to card9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. card9 ENSDARG00000067672 33 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
2. si:ch73-103l1.2 ENSDARG00000096505 17 2.496 - 0.755 - - - 0.878 0.863 - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
3. zgc:113102 ENSDARG00000103530, ENSDARG00000113011 86 2.481 - 0.931 - - - 0.841 0.709 - - zgc:113102 [Source:ZFIN;Acc:ZDB-GENE-050306-35]
4. sema6e ENSDARG00000000189 35 2 1.000 1.000 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
5. ddx46 ENSDARG00000099458 24 1.866 0.930 0.936 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
6. si:dkey-189o20.1 si:dkey-189o20.1 47 1.856 0.940 0.916 - - - - - - -
7. slc44a1a ENSDARG00000015946 10 1.851 - 1.000 - - - - - - 0.851 solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
8. hephl1 hephl1 20 1.82 - 0.942 - - - 0.878 - - -
9. si:dkey-188i13.10 ENSDARG00000075151 22 1.813 - 1.000 - - - - 0.813 - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
10. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.809 - 0.931 - - - 0.878 - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
11. si:dkey-26g8.10 si:dkey-26g8.10 100 1.808 - 0.957 - - - 0.851 - - -
12. HIST1H2BA_1 ENSDARG00000116654 37 1.791 1.000 - - - - - - - 0.791 histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
13. nceh1b nceh1b 22 1.773 - - - - - 0.878 0.895 - -
14. si:ch211-155o21.4 ENSDARG00000096567 25 1.747 1.000 0.747 - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
15. zgc:171452 ENSDARG00000074069 6 1.741 - - - - - 0.878 0.863 - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
16. ERCC6L2 ENSDARG00000012403 236 1.732 - 0.931 - - - 0.801 - - - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
17. si:ch211-162i8.6 si:ch211-162i8.6 15 1.729 0.878 - - - - 0.851 - - -
18. si:ch73-346m18.6 si:ch73-346m18.6 40 1.728 0.865 - - - - - 0.863 - -
19. scpp8 ENSDARG00000093124 54 1.725 - 1.000 - - - - - - 0.725 secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
20. dock1 ENSDARG00000099093 10 1.722 1.000 - 0.722 - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
21. psme1 ENSDARG00000002165, ENSDARG00000115834 72 1.712 - 1.000 0.712 - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
22. LARP4 LARP4 48 1.708 0.981 0.727 - - - - - - -
23. CABZ01114098.1 CABZ01114098.1 28 1.706 - 0.931 - - - - 0.775 - -
24. shpk ENSDARG00000002355 84 1.705 1.000 - - - - - 0.705 - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
25. wt1b ENSDARG00000007990 39 1.702 - 1.000 - - 0.702 - - - - wilms tumor 1b [Source:ZFIN;Acc:ZDB-GENE-050420-319]
26. cacng6b ENSDARG00000046079 258 1.695 0.880 0.815 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
27. sc:d0413 sc:d0413 121 1.694 0.755 0.939 - - - - - - -
28. SYT6 SYT6 64 1.692 - 0.984 0.708 - - - - - -
29. si:dkey-15h8.14 si:dkey-15h8.14 139 1.683 - 0.884 - - - - 0.799 - -
30. zgc:162576 zgc:162576 56 1.677 0.830 - - - - 0.847 - - -
31. nkd2a ENSDARG00000055271 71 1.673 0.778 - - - - - 0.895 - - naked cuticle homolog 2a [Source:ZFIN;Acc:ZDB-GENE-071130-1]
32. marveld3 ENSDARG00000099654 113 1.673 - 0.896 0.777 - - - - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
33. zgc:112977 ENSDARG00000071741 109 1.668 - 0.955 - - - - - - 0.713 zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
34. il4r il4r 75 1.633 0.752 - - - - - 0.881 - -
35. CABZ01068473.1 CABZ01068473.1 67 1.63 - - - - - 0.793 0.837 - -
36. fastkd1 ENSDARG00000056128 141 1.628 - 0.870 - - - 0.758 - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
37. efnb2b ENSDARG00000074050 77 1.624 - 0.848 - - - 0.776 - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
38. oaz2b ENSDARG00000059815 38 1.609 - 0.742 - - - 0.867 - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
39. CU915814.1 CU915814.1 245 1.604 0.858 - - - - 0.746 - - -
40. TERF2IP ENSDARG00000103977 216 1.602 - 0.768 - - - 0.834 - - - telomeric repeat binding factor 2, interacting protein [Source:ZFIN;Acc:ZDB-GENE-131121-641]
41. havcr1 ENSDARG00000040178 73 1.592 - - - - - 0.754 0.838 - - hepatitis A virus cellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-131]
42. dak dak 139 1.585 0.795 - - - - 0.790 - - -
43. kdm6al ENSDARG00000059794 545 1.57 - - - - - 0.711 0.859 - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
44. si:dkey-15h14.4 si:dkey-15h14.4 118 1.556 - 0.839 - - - - - - 0.717
45. TOP1 ENSDARG00000086775 48 1.551 - - - - - 0.802 0.749 - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
46. si:ch211-190k17.19 ENSDARG00000095756 19 1.531 - - 0.743 - - 0.788 - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
47. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.502 - 0.763 - - - 0.739 - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
48. BX004828.1 BX004828.1 31 1.485 - 0.785 - - - - 0.700 - -
49. serp2 ENSDARG00000094003 64 1.485 - - - - 0.702 - 0.783 - - stress-associated endoplasmic reticulum protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-081104-143]
50. pwwp2b ENSDARG00000101080 138 1.485 0.756 - - - - - 0.729 - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
51. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 1.457 - 0.706 - - - 0.751 - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
52. gng2_1 ENSDARG00000056831 113 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
53. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 - 1.000 - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
54. U6_19 U6_19 1 1 - 1.000 - - - - - - -
55. rxfp3.2a 11 1 - 1.000 - - - - - - - relaxin/insulin-like family peptide receptor 3.2a
56. CABZ01030033.1 ENSDARG00000117613 3 1 - 1.000 - - - - - - -
57. COL9A3 ENSDARG00000037845 1 1 - 1.000 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
58. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
59. 5S_rRNA_6 5S_rRNA_6 11 1 - 1.000 - - - - - - -
60. CCDC18_1 CCDC18_1 3 1 - 1.000 - - - - - - -
61. zgc:158446 36 1 - 1.000 - - - - - - - zgc:158446
62. ABCC3 ENSDARG00000096662 15 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
63. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
64. si:dkey-29d8.3 ENSDARG00000091879 21 1 - 1.000 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
65. stxbp4 ENSDARG00000076997 20 1 - 1.000 - - - - - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
66. si:ch211-264f5.2 ENSDARG00000078547 12 1 - 1.000 - - - - - - - si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]
67. zgc:173652 22 1 - 1.000 - - - - - - - zgc:173652
68. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 1 - 1.000 - - - - - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
69. zgc:165627 zgc:165627 4 1 1.000 - - - - - - - -
70. si:dkey-42p8.3 1117 1 - 1.000 - - - - - - - si:dkey-42p8.3, transcript variant X1
71. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - 1.000 - - - - - - -
72. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
73. mir142a 20 1 - 1.000 - - - - - - - microRNA 142a
74. RNF122 RNF122 29 1 - 1.000 - - - - - - -
75. radil ENSDARG00000079779 14 1 - 1.000 - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
76. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - 1.000 - - - - - - -
77. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
78. CU638737.1 CU638737.1 17 1 1.000 - - - - - - - -
79. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
80. si:ch211-284e13.11 ENSDARG00000091997 3 1 - 1.000 - - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
81. CR356223.6 CR356223.6 4 1 - 1.000 - - - - - - -
82. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
83. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
84. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
85. plxnc1 ENSDARG00000015278 501 1 - 1.000 - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
86. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
87. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
88. fermt3b ENSDARG00000030938 17 1 1.000 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
89. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
90. irf8 ENSDARG00000056407 85 1 - 1.000 - - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
91. si:ch73-290k24.5 ENSDARG00000076310 39 1 1.000 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
92. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
93. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
94. si:dkey-256e7.8 ENSDARG00000092022 4 1 1.000 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
95. thap7 ENSDARG00000070704 225 1 1.000 - - - - - - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
96. FP236851.1 FP236851.1 10 1 1.000 - - - - - - - -
97. tbc1d22b ENSDARG00000026988 18 1 - 1.000 - - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
98. TOR4A TOR4A 70 1 1.000 - - - - - - - -
99. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - 1.000 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
100. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - 1.000 - - - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]

There are 1240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA