Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for capns1b

Gene Name Gene ID Reads Annotation
capns1b ENSDARG00000013804 37726 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]










Genes with expression patterns similar to capns1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. capns1b ENSDARG00000013804 37726 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
2. cfl1l ENSDARG00000012972 109130 3.024 0.727 - - 0.712 - 0.721 - 0.864 - cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
3. ppl ENSDARG00000101043 9196 2.28 0.729 - 0.767 - - 0.784 - - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
4. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.721 - - - - 0.974 - - - 0.747 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
5. pfn1 ENSDARG00000088091 71242 1.629 0.885 - - - - - - 0.744 - profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
6. hdac1 ENSDARG00000015427 19804 1.617 - - - - 0.896 - 0.721 - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
7. FP067396.1 FP067396.1 32149 1.601 0.818 - - - - - - 0.783 -
8. eef1da ENSDARG00000102291 9339 1.566 - 0.704 - - - - - - 0.862 eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]
9. icn2 ENSDARG00000055514 38531 1.554 - - 0.734 - - - - 0.820 - ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
10. KRTCAP2 ENSDARG00000070386 10103 1.509 - 0.714 - - - - - - 0.795 keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
11. tmsb4x ENSDARG00000077777 670040 1.491 0.731 - - - 0.760 - - - - thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
12. s100v1 ENSDARG00000070427 6633 1.48 - - 0.700 - - 0.780 - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
13. rac2 ENSDARG00000038010 5837 1.478 - - - - - 0.732 - 0.746 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
14. s100a10b ENSDARG00000025254 25240 1.469 0.728 - - - - - - 0.741 - S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
15. tmem189 ENSDARG00000042732 4004 1.462 - 0.719 - - - 0.743 - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
16. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.455 - - - - - 0.744 - 0.711 - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
17. FP102272.1 FP102272.1 9473 1.455 - - 0.733 - - - - - 0.722
18. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.454 - - - - - 0.749 - - 0.705 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
19. krt4 ENSDARG00000017624, ENSDARG00000115790 2008869 1.447 0.726 - - - - - - 0.721 - keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
20. znf185 ENSDARG00000103917 7195 1.446 - 0.723 - - - 0.723 - - - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
21. cd164 ENSDARG00000013628 21750 1.437 0.728 0.709 - - - - - - - CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
22. arpc4 ENSDARG00000054063 6150 1.434 - - - 0.708 - 0.726 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
23. vimp 4034 1.426 - - 0.721 - - 0.705 - - - VCP-interacting membrane selenoprotein
24. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 1.41 0.700 - - - - - 0.710 - - sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
25. anxa1a ENSDARG00000026726 23173 0.977 - - - - 0.977 - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
26. acyp1 ENSDARG00000060126 2161 0.974 - - - - 0.974 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
27. pcgf6 ENSDARG00000069681 2382 0.974 - - - - 0.974 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
28. vps35 ENSDARG00000008224 13245 0.974 - - - - 0.974 - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
29. phgdh ENSDARG00000001873 8325 0.974 - - - - 0.974 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
30. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.974 - - - - 0.974 - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
31. nip7 ENSDARG00000059075 3964 0.973 - - - - 0.973 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
32. mrps25 ENSDARG00000041306 3654 0.973 - - - - 0.973 - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
33. C25H1orf51 C25H1orf51 2460 0.973 - - - - 0.973 - - - -
34. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.973 - - - - 0.973 - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
35. sh3kbp1 ENSDARG00000075853 2838 0.973 - - - - 0.973 - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
36. si:dkey-191j3.3 si:dkey-191j3.3 1987 0.973 - - - - 0.973 - - - -
37. snap25a ENSDARG00000020609 4537 0.973 - - - - 0.973 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
38. nrp2a_1 ENSDARG00000096546 3358 0.973 - - - - 0.973 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
39. taf9 ENSDARG00000077870 6992 0.973 - - - - 0.973 - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
40. ncalda ENSDARG00000070688 5069 0.972 - - - - 0.972 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
41. ptprnb ENSDARG00000077047 2743 0.972 - - - - 0.972 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
42. six3b ENSDARG00000054879 2416 0.972 - - - - 0.972 - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
43. tegt ENSDARG00000077934 27182 0.971 - - - - 0.971 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
44. rbb4 rbb4 15541 0.971 - - - - 0.971 - - - -
45. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.97 - - - - 0.970 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
46. atp5h 18018 0.97 - - - - 0.970 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
47. znf706 ENSDARG00000056307 12518 0.97 - - - - 0.970 - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
48. ppp5c ENSDARG00000034313 8794 0.97 - - - - 0.970 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
49. FOXK2 ENSDARG00000030583 5500 0.966 - - - - 0.966 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
50. anp32b ENSDARG00000023330 25013 0.964 - - - - 0.964 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
51. rpl27 ENSDARG00000015128 108038 0.959 - - - - 0.959 - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
52. sap130a ENSDARG00000056924 3156 0.955 - - - - 0.955 - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
53. zgc:158409 zgc:158409 21963 0.955 - - - - 0.955 - - - -
54. fbxo28 ENSDARG00000027159 9602 0.953 - - - - 0.953 - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
55. zgc:92533 zgc:92533 141172 0.946 - - - - 0.946 - - - -
56. atp5g1 51897 0.943 - - - - 0.943 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
57. ccnd1 ENSDARG00000101637 34762 0.937 - - - - 0.937 - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
58. uba52 ENSDARG00000041435 50415 0.929 - - - - 0.929 - - - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
59. rps15a ENSDARG00000010160 94499 0.91 - - - - 0.910 - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
60. camk2g1 ENSDARG00000071395 10456 0.866 - 0.866 - - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 [Source:ZFIN;Acc:ZDB-GENE-050913-146]
61. rps11 ENSDARG00000053058 16233 0.86 - - - 0.860 - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
62. col6a1 ENSDARG00000074908 2339 0.858 - - - - - - - - 0.858 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
63. capn2a ENSDARG00000091699 5924 0.857 - - - - - - - - 0.857 calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
64. ppiaa ENSDARG00000009212 290634 0.856 - - - - 0.856 - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
65. rplp1 ENSDARG00000021864 127841 0.85 - - - - 0.850 - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
66. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 0.843 - - - - - - - - 0.843 connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
67. bcam ENSDARG00000090190 39912 0.842 - 0.842 - - - - - - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
68. eif3f ENSDARG00000077533 24387 0.841 - 0.841 - - - - - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
69. col4a6 ENSDARG00000052061 8636 0.837 - - - - - - - - 0.837 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
70. prdx5 ENSDARG00000055064 27445 0.83 0.830 - - - - - - - - peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
71. sec23a ENSDARG00000104230 3910 0.828 - - - - - - - - 0.828 Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
72. pgm1 ENSDARG00000013561 11984 0.824 - - - - - - 0.824 - - phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
73. slc25a3b ENSDARG00000025566 32264 0.822 - - - - - - 0.822 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
74. ssr2 ENSDARG00000005230 31940 0.819 - - - - - - - - 0.819 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
75. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.818 - - - - - - - - 0.818 scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
76. ssr4 ENSDARG00000019444 20207 0.814 - - - - - - - - 0.814 signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
77. snai2 ENSDARG00000040046 2415 0.813 - - - - - - - - 0.813 snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
78. zgc:136410 ENSDARG00000102241 8433 0.813 0.813 - - - - - - - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
79. shmt1 ENSDARG00000052816 5463 0.806 0.806 - - - - - - - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
80. sqstm1 ENSDARG00000075014 2392 0.799 - - - - - - - - 0.799 sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
81. rpl11 ENSDARG00000043509 123498 0.799 - - - 0.799 - - - - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
82. serpinh1b ENSDARG00000019949 11693 0.798 - - - - - - - - 0.798 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
83. tkt tkt 7203 0.796 0.796 - - - - - - - -
84. apoc2 ENSDARG00000092155 38149 0.795 0.795 - - - - - - - - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
85. SLC13A4 ENSDARG00000059053 2114 0.793 0.793 - - - - - - - - solute carrier family 13 (sodium/sulfate symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]
86. dcn ENSDARG00000012066 6182 0.791 - - - - - - - - 0.791 decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
87. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 0.791 0.791 - - - - - - - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
88. epcam ENSDARG00000040534, ENSDARG00000110073 3322 0.789 0.789 - - - - - - - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
89. emilin1b ENSDARG00000026166 1530 0.788 - - - - - - - - 0.788 elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
90. anxa1c ENSDARG00000104359 23181 0.787 - - - - - 0.787 - - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
91. icn ENSDARG00000009978 85647 0.787 - - - - - - - 0.787 - ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
92. zgc:101846 15202 0.786 - - - 0.786 - - - - - zgc:101846
93. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 41521 0.786 0.786 - - - - - - - - ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
94. CU914813.1 CU914813.1 29656 0.785 - - - - - - - - 0.785
95. fgg ENSDARG00000037281, ENSDARG00000114705 10817 0.785 0.785 - - - - - - - - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
96. ctsk ENSDARG00000040251 1111 0.782 - - - - - - - - 0.782 cathepsin K [Source:ZFIN;Acc:ZDB-GENE-001205-4]
97. rpl18a ENSDARG00000025073 170983 0.781 - - - - 0.781 - - - - ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
98. hsdl2 ENSDARG00000002523 2746 0.78 - - - - - - - - 0.780 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
99. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 0.78 0.780 - - - - - - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
100. atp1b1b ENSDARG00000076833 10324 0.779 0.779 - - - - - - - - ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]

There are 237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA