Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for capn9

Gene Name Gene ID Reads Annotation
capn9 ENSDARG00000012341 12911 calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]










Genes with expression patterns similar to capn9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. capn9 ENSDARG00000012341 12911 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
2. anxa1b ENSDARG00000100095 7763 3.404 - - - - 0.905 0.916 0.864 0.719 - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
3. s100u ENSDARG00000071014 4754 2.563 - 0.923 0.888 - - - 0.752 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
4. CABZ01007794.1 CABZ01007794.1 14290 2.515 0.810 - - - 0.901 - 0.804 - -
5. thoc2 ENSDARG00000037503 8711 2.459 - 0.801 0.854 - - 0.804 - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
6. cldne ENSDARG00000043128 6960 2.452 0.816 - - - - - 0.763 0.873 - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
7. tram1 ENSDARG00000019137, ENSDARG00000109629 8309 2.445 0.775 0.889 0.781 - - - - - - translocation associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-021011-1]
8. cldni ENSDARG00000054616, ENSDARG00000111133 16328 2.368 - 0.745 - - 0.811 - - 0.812 - claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
9. eif4ebp3l ENSDARG00000041607 5257 2.281 - - - 0.757 - 0.806 0.718 - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
10. znf185 ENSDARG00000103917 7195 2.275 - - - 0.714 - - 0.761 0.800 - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
11. capn2b ENSDARG00000055592 5431 2.252 0.705 - - - - - 0.731 0.816 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
12. tfa ENSDARG00000016771 30517 2.215 0.717 0.798 - - - - 0.700 - - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
13. chmp4b chmp4b 5318 1.813 - - 0.852 - - 0.961 - - -
14. fn1b ENSDARG00000006526 9542 1.774 0.869 - - - - - 0.905 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
15. BX511245.1 ENSDARG00000096871 7523 1.773 0.874 0.899 - - - - - - -
16. AP2A1 ENSDARG00000054320 5591 1.767 - - - - 0.823 0.944 - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
17. si:dkey-87o1.2 ENSDARG00000095796 6602 1.745 0.883 0.862 - - - - - - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
18. PHLDB1 PHLDB1 3821 1.714 - - 0.896 - - 0.818 - - -
19. snrpe ENSDARG00000033175 7462 1.711 - - 0.874 - 0.837 - - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
20. grb2b ENSDARG00000038059 9050 1.704 - 0.859 - - 0.845 - - - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
21. tmem223 ENSDARG00000069494 1528 1.699 - - 0.882 - - 0.817 - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
22. efhd2 ENSDARG00000055759 7777 1.697 0.839 - - - - - 0.858 - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
23. ywhaz ENSDARG00000032575 15257 1.693 - - 0.833 - - 0.860 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
24. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.668 0.765 0.903 - - - - - - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
25. WDR61 ENSDARG00000007755 2827 1.667 - - - - 0.859 0.808 - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
26. MAF1 ENSDARG00000013122 6899 1.658 - 0.840 - - 0.818 - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
27. NDUFA3 ENSDARG00000041400 7939 1.657 - 0.782 - - 0.875 - - - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
28. emilin3a ENSDARG00000078052 1652 1.656 - - 0.855 - 0.801 - - - - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
29. bambia ENSDARG00000055381 2922 1.655 - 0.899 - - - - 0.756 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
30. ywhaqa ENSDARG00000042539 7034 1.654 - 0.854 0.800 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
31. tfam ENSDARG00000063145 4524 1.645 - - 0.902 - - - - - 0.743 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
32. ssr4 ENSDARG00000019444 20207 1.644 - - 0.813 - - - 0.831 - - signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
33. rbm8a ENSDARG00000016516 8789 1.642 - 0.781 0.861 - - - - - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
34. sec61a1 ENSDARG00000021669 20408 1.64 0.756 - - - 0.884 - - - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
35. tomm7 ENSDARG00000067717 4452 1.638 - - - - 0.837 0.801 - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
36. NDNF ENSDARG00000062936 7287 1.627 - - 0.838 - - 0.789 - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
37. glula ENSDARG00000099776 14156 1.618 0.796 - - - - 0.822 - - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
38. sardh ENSDARG00000058102, ENSDARG00000112110 2150 1.613 0.779 - - - 0.834 - - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
39. npc1 ENSDARG00000017180 3724 1.607 0.774 - - - 0.833 - - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
40. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.607 0.793 0.814 - - - - - - - death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
41. CABZ01059390.1 CABZ01059390.1 4340 1.605 - - - - 0.866 - 0.739 - -
42. pcbd1 ENSDARG00000031981 3373 1.604 0.862 - - - - - 0.742 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
43. hnrnpua ENSDARG00000015206 4012 1.598 - - 0.857 - - - - - 0.741 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
44. cnn2 ENSDARG00000035858 18201 1.598 0.780 - - - - - - - 0.818 calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
45. and3 ENSDARG00000056873 22650 1.597 - - - - - - 0.781 0.816 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
46. gsnb ENSDARG00000045262 4382 1.597 - 0.852 - - - - 0.745 - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
47. dsg2 dsg2 4039 1.595 - - - - - 0.823 0.772 - -
48. ppl ENSDARG00000101043 9196 1.592 0.814 - - - - - 0.778 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
49. foxa2 ENSDARG00000003411 2309 1.588 - - - - 0.844 - - - 0.744 forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
50. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 1.587 0.842 - - - - - 0.745 - - sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
51. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.586 0.725 - 0.861 - - - - - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
52. snx1a ENSDARG00000071031 3975 1.585 - - - - 0.851 0.734 - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
53. ATOX1 ENSDARG00000087693 4016 1.584 0.705 - 0.879 - - - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
54. cst3 ENSDARG00000007795 13753 1.577 0.853 - - - - - - - 0.724 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
55. dennd2da ENSDARG00000058666 1780 1.576 - - - - - 0.832 0.744 - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
56. serpinh1b ENSDARG00000019949 11693 1.571 - 0.798 0.773 - - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
57. mdka ENSDARG00000036036 23084 1.571 - - - - - 0.816 0.755 - - midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
58. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.568 - - - - - - 0.760 0.808 - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
59. fkbp3 ENSDARG00000098059 5428 1.556 - 0.751 - - 0.805 - - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
60. s100a10b ENSDARG00000025254 25240 1.556 0.778 - - - - - 0.778 - - S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
61. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 1.555 0.813 - - - - - - - 0.742 phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
62. paics ENSDARG00000033539 30682 1.552 0.783 - - - - - 0.769 - - phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
63. col18a1 col18a1 20555 1.552 - - - - 0.788 - 0.764 - -
64. rnf183 ENSDARG00000068851 2427 1.547 - 0.824 - - - - 0.723 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
65. actb2 ENSDARG00000037870 441005 1.537 0.761 - - - - - - 0.776 - actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
66. zgc:110239 ENSDARG00000077664 7015 1.534 0.759 - - - - 0.775 - - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
67. derl1 ENSDARG00000021905 4698 1.533 0.702 - 0.831 - - - - - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
68. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.532 - - - - - 0.820 0.712 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
69. krt8 ENSDARG00000058358, ENSDARG00000109279 85624 1.529 - 0.806 - - - - - 0.723 - keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
70. plbd1 ENSDARG00000063313 2842 1.528 0.813 - - - - - 0.715 - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
71. vcanb ENSDARG00000009401 3611 1.523 - - - - - - 0.743 0.780 - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
72. KRT78 KRT78 10751 1.519 0.733 - - - - - 0.786 - -
73. APOD APOD 3404 1.519 - - - - - - 0.770 0.749 -
74. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.519 0.787 - - - - - 0.732 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
75. slc25a1b ENSDARG00000076381 6213 1.516 0.780 - - - - - 0.736 - - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
76. hoxb10a ENSDARG00000011579 2135 1.513 - - - - - 0.800 - 0.713 - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
77. lman2 ENSDARG00000061854 6251 1.51 - - - - 0.703 0.807 - - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
78. dmgdh ENSDARG00000025703 6088 1.506 0.797 - - - - - 0.709 - - dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
79. dao.1 ENSDARG00000035602 11969 1.503 0.771 - - - - - 0.732 - - D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
80. prdx2 ENSDARG00000025350 11194 1.496 - 0.794 - - - - 0.702 - - peroxiredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-030326-2]
81. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.495 - - - - - - 0.776 - 0.719 Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
82. pdxdc1 ENSDARG00000101886 1958 1.494 0.783 - - - - - - 0.711 - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
83. s100v2 ENSDARG00000070702 8645 1.485 0.771 - - - - - - 0.714 - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
84. zgc:109868 zgc:109868 7474 1.48 0.725 - - - - - 0.755 - -
85. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 41521 1.477 0.701 - 0.776 - - - - - - ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
86. syne2b ENSDARG00000053484 9225 1.474 - - - - 0.717 0.757 - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
87. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.473 0.760 - - - - - 0.713 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
88. isca1 ENSDARG00000051956 5855 1.471 0.740 - - - - - 0.731 - - iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
89. itgb1b.1 ENSDARG00000053232 4721 1.468 - 0.732 - - - - 0.736 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
90. abcb5 ENSDARG00000021787 2875 1.468 0.743 - - - - - 0.725 - - ATP-binding cassette, sub-family B (MDR/TAP), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6414]
91. anxa1a ENSDARG00000026726 23173 1.467 0.748 - - - - - 0.719 - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
92. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.467 - - - - - - 0.725 0.742 - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
93. myl12.1 ENSDARG00000099766 50993 1.463 0.707 - - - - - - 0.756 - myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
94. MAL 9331 1.46 0.738 - - - - - 0.722 - - mal, T-cell differentiation protein
95. WDR1 ENSDARG00000114022 7532 1.454 - - - - - - 0.713 0.741 - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
96. cdh1 ENSDARG00000102750 8654 1.451 0.742 - - - - - - 0.709 - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
97. arpc2 ENSDARG00000075989 22423 1.446 - - - - - - 0.709 - 0.737 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
98. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.438 0.729 - - - - - 0.709 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
99. tpst1 ENSDARG00000073872 2490 1.435 0.722 - - - - - 0.713 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
100. si:ch211-217k17.9 ENSDARG00000093494 3452 1.43 0.701 - - - - - 0.729 - - si:ch211-217k17.9 [Source:ZFIN;Acc:ZDB-GENE-061207-21]

There are 849 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA