Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for capn3a

Gene Name Gene ID Reads Annotation
capn3a ENSDARG00000041864 89 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]










Genes with expression patterns similar to capn3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. capn3a ENSDARG00000041864 89 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
2. mipa ENSDARG00000037285, ENSDARG00000116133 507 4.669 - - 0.967 0.924 0.857 - - 0.924 0.997 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
3. mipb ENSDARG00000013963 753 4.578 - - 0.935 0.933 0.836 - - 0.897 0.977 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
4. lim2.4 ENSDARG00000015445 791 4.571 - - 0.948 0.852 0.886 - - 0.905 0.980 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
5. cx44.1 cx44.1 799 4.548 - - 0.941 0.934 0.873 - - 0.835 0.965
6. cryba1l1 ENSDARG00000032929 1868 4.544 - - 0.916 0.885 0.882 - - 0.914 0.947 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
7. cryba2a ENSDARG00000030349 1342 4.542 - - 0.928 0.911 0.853 - - 0.926 0.924 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
8. zgc:165347_1 zgc:165347_1 69 4.472 - - 0.951 0.852 0.901 - - 0.775 0.993
9. crygm2d1 ENSDARG00000087324 258 4.431 - - 0.901 0.816 0.901 - - 0.820 0.993 crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
10. lim2.3 ENSDARG00000037402 302 4.37 - - 0.954 0.868 0.826 - - 0.867 0.855 lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
11. si:ch211-212n6.16 si:ch211-212n6.16 314 4.368 - - 0.972 0.740 0.893 - - 0.858 0.905
12. crygmx ENSDARG00000053862 482 4.365 - - 0.804 0.924 0.828 - - 0.815 0.994 crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
13. zgc:110053 zgc:110053 69 4.307 - - 0.809 0.794 0.909 - - 0.818 0.977
14. cx23 ENSDARG00000054150 115 4.297 - - 0.734 0.900 0.791 - - 0.939 0.933 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
15. crybb1l2 ENSDARG00000016793 723 4.29 - - 0.856 0.833 0.895 - - 0.917 0.789 crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
16. cryba4 ENSDARG00000024548 111 4.288 - - 0.847 0.811 0.760 - - 0.882 0.988 crystallin, beta A4 [Source:ZFIN;Acc:ZDB-GENE-050522-143]
17. crygm2d10 ENSDARG00000087765 358 4.266 - - 0.963 0.803 0.762 - - 0.817 0.921 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
18. si:ch211-212n6.18 si:ch211-212n6.18 233 4.249 - - 0.818 0.822 0.799 - - 0.820 0.990
19. zgc:162402 zgc:162402 298 4.224 - - 0.914 0.731 0.901 - - 0.810 0.868
20. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 4.158 - - 0.912 0.723 0.754 - - 0.836 0.933 crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
21. crybb1 ENSDARG00000068507 2255 4.089 - - 0.865 0.791 0.869 - - 0.859 0.705 crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
22. si:ch211-274p24.3 si:ch211-274p24.3 72 4.066 - - 0.816 0.774 0.851 - - 0.757 0.868
23. crybb1l1 ENSDARG00000007576 1020 3.725 - - 0.976 - 0.874 - - 0.904 0.971 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
24. cryba2b ENSDARG00000041925 4329 3.668 - - 0.918 0.930 0.897 - - 0.923 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
25. grifin ENSDARG00000033382 141 3.628 - - 0.880 0.808 - - - 0.948 0.992 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
26. crygmxl2 ENSDARG00000074001 282 3.626 - - 0.981 0.885 - - - 0.903 0.857 crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
27. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 3.626 - - 0.868 0.959 - - - 0.810 0.989 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
28. prox2 ENSDARG00000041952, ENSDARG00000117137 112 3.572 - - 0.846 0.841 - - - 0.920 0.965 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
29. cryba1l2 ENSDARG00000014803 47 3.543 - - 0.740 0.871 - - - 0.941 0.991 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
30. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 3.518 - - 0.975 0.713 - - - 0.843 0.987 crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
31. si:ch211-145g9.7 32 3.501 - - 0.971 0.729 0.813 - - - 0.988 si:ch211-145g9.7, transcript variant X1
32. crygm2d9 ENSDARG00000115701 28 3.477 - - 0.821 0.834 0.853 - - - 0.969 crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
33. zgc:86723 zgc:86723 299 3.456 - - 0.950 0.706 - - - 0.805 0.995
34. crygm2d16 ENSDARG00000076790 129 3.455 - - 0.873 0.778 - - - 0.811 0.993 crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
35. crygm2d13 ENSDARG00000057460 1093 3.442 - - 0.966 0.780 0.846 - - 0.850 - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
36. cryba1b ENSDARG00000053875 3256 3.368 - - 0.898 0.759 - - - 0.728 0.983 crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
37. crygm2d6 ENSDARG00000073874 38 2.86 - - 0.975 - - - - 0.890 0.995 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
38. crygm2d8 ENSDARG00000116164 698 2.817 - - 0.983 - - - - 0.842 0.992 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
39. crygn2 ENSDARG00000030411 2551 2.796 - - 0.929 - 0.874 - - - 0.993 crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
40. cps1 ENSDARG00000020028 67 2.782 - - - 0.869 - - - 0.917 0.996 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
41. zgc:165347 zgc:165347 1358 2.731 - - 0.938 - 0.894 - - 0.899 -
42. cx50.5 cx50.5 15 2.653 - - - 0.814 - - - 0.867 0.972
43. crygm2d3 ENSDARG00000088823 1560 2.631 - - 0.931 0.845 - - - 0.855 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
44. CU929052.1 CU929052.1 642 2.63 - - 0.906 0.846 - - - 0.878 -
45. crygm2d5 ENSDARG00000069792 207 2.609 - - 0.929 - - - - 0.907 0.773 crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
46. lim2.5 ENSDARG00000041295 56 2.479 - - 0.821 - - - - 0.779 0.879 lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
47. nrl ENSDARG00000100466 41 2.455 - - 0.754 0.742 - - - - 0.959 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
48. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 2.442 - - 0.821 0.840 - - - 0.781 - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
49. si:ch211-152c2.3 ENSDARG00000045898 3448 2.404 - - 0.838 0.841 0.725 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
50. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 2.273 - - - 0.776 - - - 0.721 0.776 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
51. crygm2d14 ENSDARG00000087301 66 1.988 - - 0.994 - - - - - 0.994 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
52. otc ENSDARG00000062147 95 1.918 - - - - - - - 0.967 0.951 ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
53. crygm2d15 ENSDARG00000069826 48 1.883 - - - - - - - 0.907 0.976 crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
54. si:dkey-53f14.2 si:dkey-53f14.2 4 1.879 1.000 - - - - - - - 0.879
55. BX000348.1 BX000348.1 2 1.821 1.000 - 0.821 - - - - - -
56. XKR8 XKR8 9 1.821 1.000 - 0.821 - - - - - -
57. crygmxl1 ENSDARG00000018797 7 1.809 - - 0.821 - - - - - 0.988 crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
58. cryba1a ENSDARG00000041141 8 1.802 - - - - 0.853 - - - 0.949 crystallin, beta A1a [Source:ZFIN;Acc:ZDB-GENE-040718-107]
59. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.802 - - 0.821 - - - - - 0.981 lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
60. zgc:165525 zgc:165525 207 1.797 - - 0.919 - - - - - 0.878
61. lgsn ENSDARG00000007715 8 1.794 - - - - - - - 0.810 0.984 lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
62. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1.768 - - - - - - - 0.777 0.991 crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
63. myt1la ENSDARG00000008209 120 1.758 0.912 - - 0.846 - - - - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
64. crybb1l3 ENSDARG00000007655 33 1.749 - - - 0.774 - - - - 0.975 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
65. foxg1a ENSDARG00000070769 928 1.749 0.861 - - 0.888 - - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
66. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 1.732 - - - - 0.853 - - - 0.879 si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
67. or133-5 ENSDARG00000105757 1 1.732 - - - - 0.853 - - - 0.879 odorant receptor, family H, subfamily 133, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-38]
68. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1.725 1.000 - - - - - - 0.725 - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
69. si:ch211-119d14.3 ENSDARG00000075332 12 1.709 0.830 - - - - - - - 0.879 si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
70. si:ch73-381a20.2 si:ch73-381a20.2 11 1.705 0.984 - 0.721 - - - - - -
71. wnt7ba ENSDARG00000022858 1 1.7 - - 0.821 - - - - - 0.879 wingless-type MMTV integration site family, member 7Ba [Source:ZFIN;Acc:ZDB-GENE-041210-178]
72. lctlb ENSDARG00000016337 35 1.697 - - - - - - - 0.863 0.834 lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
73. foxq2 ENSDARG00000071394 3 1.693 - - - - - - - 0.738 0.955 forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
74. atoh7 ENSDARG00000069552 254 1.681 - - - 0.906 - - - 0.775 - atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
75. fip1l1a ENSDARG00000043328 7 1.629 - - - 0.739 - - - - 0.890 FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
76. si:dkey-21o19.2 ENSDARG00000088900 52 1.621 - - - - 0.752 - - 0.869 - si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
77. rx2 ENSDARG00000040321 112 1.61 - - - 0.779 - - - 0.831 - retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
78. CCDC88A_1 CCDC88A_1 12 1.592 - - - - - - - 0.760 0.832
79. SLC9B1 SLC9B1 137 1.59 0.868 - - - - - - 0.722 -
80. si:ch211-209f23.3 ENSDARG00000095607 15 1.578 0.725 - - - 0.853 - - - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
81. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.57 - - - 0.794 - - - - 0.776 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
82. rnh1 ENSDARG00000086631 14 1.56 - - - 0.707 0.853 - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
83. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.558 - - - 0.752 - - - 0.806 - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
84. nkx2.1b nkx2.1b 125 1.554 - - - - - - - 0.789 0.765
85. sparcl1 ENSDARG00000074989 80 1.554 - - - - - - - 0.783 0.771 SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
86. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.546 - - - - - - - 0.816 0.730 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
87. ahr1b ENSDARG00000023537 44 1.535 - - 0.777 - - - - 0.758 - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
88. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 1.53 - - 0.725 - 0.805 - - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
89. pax6l pax6l 54 1.521 - - - - - - - 0.793 0.728
90. foxg1b ENSDARG00000032705 354 1.519 - - - 0.758 - - - - 0.761 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
91. fabp11b ENSDARG00000002311 354 1.516 - - - 0.804 0.712 - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
92. sept4a ENSDARG00000010385 75 1.511 - - - 0.716 - - - 0.795 - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
93. gpnmb ENSDARG00000062688 259 1.435 - - 0.727 - 0.708 - - - - glycoprotein (transmembrane) nmb [Source:ZFIN;Acc:ZDB-GENE-060503-106]
94. TUBB6 ENSDARG00000104801 121 1.413 - - 0.706 - - - - - 0.707 tubulin, beta 6 class V [Source:ZFIN;Acc:ZDB-GENE-070424-195]
95. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
96. si:ch1073-416j23.1 ENSDARG00000055934 4 1 1.000 - - - - - - - - si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
97. CDH18 ENSDARG00000102769 4 1 1.000 - - - - - - - - cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757]
98. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -
99. THSD7B THSD7B 15 1 1.000 - - - - - - - -
100. lcp2a ENSDARG00000055955 23 1 1.000 - - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]

There are 566 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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