Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for calr

Gene Name Gene ID Reads Annotation
calr ENSDARG00000076290 13987 calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]










Genes with expression patterns similar to calr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calr ENSDARG00000076290 13987 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
2. srsf2a ENSDARG00000057484 25721 4.228 0.774 0.983 0.914 - 0.810 - 0.747 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
3. sipa1l2 ENSDARG00000061640 4545 2.563 - 0.954 - - 0.839 0.770 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
4. ACTN4_1 ACTN4_1 8550 2.509 - 0.787 0.896 - - - 0.826 - -
5. sdc2 ENSDARG00000002731 6607 2.475 - 0.956 - - - 0.763 0.756 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
6. calrl calrl 16799 2.45 - - - - - 0.822 0.816 0.812 -
7. chd2 ENSDARG00000060687 3832 2.428 0.840 - - - 0.858 0.730 - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
8. denr ENSDARG00000037229 8370 1.852 0.868 0.984 - - - - - - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
9. selt2 12741 1.849 - 0.957 0.892 - - - - - - selenoprotein T, 2
10. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.848 0.898 0.950 - - - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
11. WDR1 ENSDARG00000114022 7532 1.82 0.863 0.957 - - - - - - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
12. cope ENSDARG00000018562 17276 1.813 - - 0.972 - - - 0.841 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
13. ccne2 ENSDARG00000098529 4695 1.79 - 0.955 - - 0.835 - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
14. psmc2 ENSDARG00000020101 8095 1.789 0.882 - 0.907 - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
15. tctex1d1 ENSDARG00000103545 409 1.783 0.883 - - - - - - 0.900 - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
16. sdad1 ENSDARG00000105117 2819 1.772 - - 0.911 - 0.861 - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
17. ercc4 ENSDARG00000014161 2167 1.769 0.876 - 0.893 - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
18. skp1 ENSDARG00000003151 8172 1.769 - 0.961 - - - 0.808 - - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
19. mat2b ENSDARG00000012932 3146 1.751 0.883 - - - 0.868 - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
20. CU695232.1 ENSDARG00000098286 1266 1.75 - - 0.912 - - - - 0.838 - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
21. aclya ENSDARG00000099079 2324 1.747 0.887 - - - 0.860 - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
22. cbx3b ENSDARG00000092158 1976 1.739 0.893 - - - - - - 0.846 - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
23. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.739 - 0.961 - - - 0.778 - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
24. ITFG3 ITFG3 1803 1.733 0.821 - 0.912 - - - - - -
25. hat1 ENSDARG00000034916 5712 1.718 - - 0.907 - 0.811 - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
26. crtap ENSDARG00000018010 7722 1.715 0.897 - - - - - 0.818 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
27. cand1 ENSDARG00000017841 8164 1.711 - - - - 0.855 0.856 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
28. malt1a malt1a 903 1.71 - 0.950 - - - - - 0.760 -
29. nop58 ENSDARG00000104353 8497 1.709 - - 0.900 - 0.809 - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
30. tmem9b ENSDARG00000025693 2693 1.709 - 0.955 - - - 0.754 - - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
31. ammecr1 ENSDARG00000012892 14475 1.708 0.935 - - - - 0.773 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
32. ACVR1B ACVR1B 4824 1.707 - 0.956 - - - 0.751 - - -
33. BX004880.1 BX004880.1 638 1.702 0.872 - - - - - - 0.830 -
34. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.701 - - 0.911 - - - - 0.790 - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
35. hoxb3a ENSDARG00000029263 5493 1.697 0.895 - - - 0.802 - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
36. cox6c ENSDARG00000038577 16845 1.695 - 0.928 - - 0.767 - - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
37. cers5 ENSDARG00000002365 2540 1.692 0.831 - - - 0.861 - - - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
38. SERP1_1 ENSDARG00000076223 6668 1.691 0.815 - - - 0.876 - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
39. ddah2 ENSDARG00000105009 4570 1.688 - - 0.912 - - 0.776 - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
40. hnrpdl 14288 1.681 0.880 - - - - - 0.801 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
41. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.68 0.902 - - - - 0.778 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
42. smo ENSDARG00000002952 6411 1.676 - 0.955 - - - 0.721 - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
43. snrpf ENSDARG00000105037 10241 1.673 - - 0.889 - - 0.784 - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
44. abracl ENSDARG00000042876 10208 1.669 0.759 - 0.910 - - - - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
45. PRODH_1 PRODH_1 3400 1.668 - 0.958 - - - - 0.710 - -
46. col4a5 ENSDARG00000052063 19251 1.666 0.880 - - - - - 0.786 - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
47. zgc:63587 ENSDARG00000017140 8399 1.664 0.899 - - - - - 0.765 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
48. rnf146 ENSDARG00000089981 715 1.651 0.816 - - - - - - 0.835 - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
49. zgc:86598 ENSDARG00000014222 3664 1.65 0.899 - - - - 0.751 - - - zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]
50. eif4ebp2 ENSDARG00000031819 13168 1.648 - - - - - 0.799 0.849 - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
51. cdk6 ENSDARG00000070228 1778 1.642 - - - - 0.846 0.796 - - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
52. CABZ01081490.1 ENSDARG00000111653 11892 1.64 - - - - - 0.816 0.824 - -
53. scinla ENSDARG00000102415, ENSDARG00000117110 1996 1.638 0.882 - - - - - - 0.756 - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
54. RNF214 RNF214 816 1.638 0.878 - - - - - - 0.760 -
55. selt1a 9746 1.636 0.904 - - - - 0.732 - - - selenoprotein T, 1a
56. mtor ENSDARG00000053196 2156 1.633 - - 0.913 - - - - 0.720 - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
57. wdr3 ENSDARG00000011079 1403 1.63 0.894 - - - - - - 0.736 - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
58. mob4 ENSDARG00000056085 17978 1.627 - - - 0.715 0.912 - - - - MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
59. si:rp71-45k5.4 ENSDARG00000035679 10411 1.625 - - 0.908 - - - - - 0.717 si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
60. flot1b ENSDARG00000037998 13600 1.624 - - - - - 0.790 0.834 - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
61. cdca7a ENSDARG00000077620 9345 1.622 - - 0.891 - - 0.731 - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
62. puf60b ENSDARG00000001241 13827 1.613 - - 0.846 - - 0.767 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
63. ap2m1a ENSDARG00000002790 9781 1.611 - - - - 0.819 - 0.792 - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
64. gars ENSDARG00000059070 17015 1.609 0.853 - - - 0.756 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
65. krcp ENSDARG00000040224 5961 1.608 0.832 - - - - - 0.776 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
66. cltcb ENSDARG00000090716 5544 1.608 0.844 - - - - 0.764 - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
67. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.608 - 0.810 - - - 0.798 - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
68. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.608 - - - - - - 0.850 - 0.758 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
69. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.605 0.861 - - - - 0.744 - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
70. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.601 0.881 - - - - 0.720 - - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
71. ubr4 ENSDARG00000009549 5565 1.599 - - - - 0.855 0.744 - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
72. scaf11 ENSDARG00000045885 3531 1.598 - - - - 0.856 - 0.742 - - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
73. mbd3a ENSDARG00000061774 4047 1.597 - - - - 0.882 0.715 - - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
74. ptenb ENSDARG00000056623 5783 1.595 - - - - 0.721 0.874 - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
75. psma3 ENSDARG00000086618 6200 1.594 - - - - 0.826 - 0.768 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
76. srsf5b ENSDARG00000027734 6996 1.592 0.884 - - - - - 0.708 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
77. EIF4G1 EIF4G1 19676 1.589 - - - - 0.787 0.802 - - -
78. sec61a1 ENSDARG00000021669 20408 1.587 - 0.881 - - - - 0.706 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
79. MARK4 ENSDARG00000024966 3377 1.577 0.864 - - - - 0.713 - - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
80. cd82a ENSDARG00000019098 6761 1.577 - - - - - 0.730 0.847 - - CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
81. serbp1a ENSDARG00000074242 10818 1.576 - - - - 0.859 - 0.717 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
82. safb ENSDARG00000020467 5608 1.576 - - - - 0.850 - 0.726 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
83. SRR SRR 544 1.57 - - - - 0.861 - - 0.709 -
84. lmnb2 ENSDARG00000101624 11304 1.57 - - - - - 0.757 0.813 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
85. api5 ENSDARG00000033597 6655 1.566 - - - - 0.745 0.821 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
86. ddx19 ENSDARG00000005699 4602 1.563 - - - - 0.727 0.836 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
87. eif3s10 ENSDARG00000076815 10822 1.56 - 0.815 - - - 0.745 - - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
88. eif3f ENSDARG00000077533 24387 1.556 - - 0.839 - - - 0.717 - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
89. tubg1 ENSDARG00000015610 2433 1.55 - - - - 0.846 - - 0.704 - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
90. gltscr2 gltscr2 5763 1.543 - - - - - 0.758 0.785 - -
91. kifc1 ENSDARG00000001558 6658 1.541 - - - - 0.791 0.750 - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
92. lamc1 ENSDARG00000036279 11025 1.539 - 0.834 - - - 0.705 - - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
93. qkia ENSDARG00000097478 18572 1.538 - - - 0.729 - 0.809 - - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
94. srsf3b ENSDARG00000059360 14888 1.538 - - - - - 0.708 0.830 - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
95. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.532 - - - 0.814 - 0.718 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
96. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.528 0.823 - - - - 0.705 - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
97. atp6v1e1b ENSDARG00000030694 5452 1.525 - - - - - 0.777 0.748 - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
98. fam213aa 1986 1.524 - - - - - - 0.821 0.703 - family with sequence similarity 213, member Aa
99. srp72 ENSDARG00000014139 5221 1.52 - - - - - 0.766 0.754 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
100. atp6ap2 ENSDARG00000008735 5096 1.516 - - - - - 0.754 0.762 - - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]

There are 1239 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA