Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for calm3a_1

Gene Name Gene ID Reads Annotation
calm3a_1 ENSDARG00000015050, ENSDARG00000100825 46072 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]










Genes with expression patterns similar to calm3a_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 46072 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
2. eif5 ENSDARG00000003681 7986 1.874 0.925 - - - - - 0.949 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
3. hnrnph1l ENSDARG00000005551 8727 1.842 0.897 - - - - - 0.945 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
4. AL929007.1 AL929007.1 3649 1.825 0.887 - - - - - 0.938 - -
5. vtna ENSDARG00000055388 2635 1.737 0.782 - - - - - 0.955 - - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
6. rps11 ENSDARG00000053058 16233 1.686 0.735 - - - - - 0.951 - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
7. zgc:63587 ENSDARG00000017140 8399 1.679 0.877 - - - - 0.802 - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
8. marcksl1b ENSDARG00000035715 37390 1.666 - - - 0.714 - - 0.952 - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
9. hnrpdl 14288 1.649 0.875 - - - - 0.774 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
10. arl8a ENSDARG00000078686 4379 1.641 0.871 - - - - - 0.770 - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
11. hnrnpm ENSDARG00000061735 19428 1.613 0.901 - - - 0.712 - - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
12. brd4 ENSDARG00000078904 5367 1.61 0.876 - - - - - - 0.734 - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
13. ywhaba ENSDARG00000013078 42000 1.59 - - - 0.789 - - - - 0.801 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
14. oaz1b ENSDARG00000104782 37623 1.588 - - - 0.784 - - 0.804 - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
15. tob1b ENSDARG00000021372 7048 1.559 0.856 - - - - 0.703 - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
16. kpnb3 ENSDARG00000040245 7967 1.501 - 0.700 - - 0.801 - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
17. tuba8l ENSDARG00000042708 48551 1.472 - - 0.741 0.731 - - - - - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
18. lsm12b ENSDARG00000109510 14459 1.47 - 0.721 - - - 0.749 - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
19. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.466 0.745 0.721 - - - - - - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
20. rps21 ENSDARG00000025850 25954 1.465 - - - 0.719 0.746 - - - - ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-040426-1102]
21. zgc:158409 zgc:158409 21963 1.464 - - 0.762 0.702 - - - - -
22. ywhaqb ENSDARG00000023323 28138 1.461 - - - - - - - 0.708 0.753 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
23. sumo3a ENSDARG00000028119 13447 1.429 - - - 0.711 0.718 - - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
24. eif3ea ENSDARG00000090697 14670 1.42 - - - 0.712 - - - - 0.708 eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
25. eif1b ENSDARG00000012688 34711 0.977 - - - - - - 0.977 - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
26. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 0.974 - - - - - - 0.974 - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
27. s100v2 ENSDARG00000070702 8645 0.966 - - - - - - 0.966 - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
28. nucks1a ENSDARG00000078473 28285 0.965 - - - - - - 0.965 - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
29. ddost ENSDARG00000037318 10904 0.964 - - - - - - 0.964 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
30. ap3m1 ENSDARG00000029928 3772 0.958 - - - - - - 0.958 - - adaptor related protein complex 3 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-021015-2]
31. pak2a ENSDARG00000068177 8931 0.957 - - - - - - 0.957 - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
32. khdrbs1b ENSDARG00000070475 18157 0.956 - - - - - - 0.956 - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
33. PLCXD1_4 PLCXD1_4 3673 0.955 - - - - - - 0.955 - -
34. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.955 - - - - - - 0.955 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
35. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.955 - - - - - - 0.955 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
36. mdh1a mdh1a 11035 0.954 - - - - - - 0.954 - -
37. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.954 - - - - - - 0.954 - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
38. gart ENSDARG00000101089 6062 0.952 - - - - - - 0.952 - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
39. elavl1 11672 0.952 - - - - - - 0.952 - - ELAV like RNA binding protein 1, transcript variant X3
40. psmd14 ENSDARG00000063100 15711 0.95 - - - - - - 0.950 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
41. rbfox2 ENSDARG00000052182 6621 0.949 - - - - - - 0.949 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
42. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 0.948 - - - - - - 0.948 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
43. aldh9a1b ENSDARG00000037061 2638 0.948 - - - - - - 0.948 - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
44. mtp_1 3298 0.948 - - - - - - 0.948 - - microsomal triglyceride transfer protein
45. dcun1d1 ENSDARG00000099642 2043 0.948 - - - - - - 0.948 - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
46. psmb3 ENSDARG00000013938 10744 0.947 - - - - - - 0.947 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
47. wu:fb12e11 wu:fb12e11 2332 0.946 - - - - - - 0.946 - -
48. gpt2l ENSDARG00000019541 3397 0.946 - - - - - - 0.946 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
49. mcm5 ENSDARG00000019507 6407 0.946 - - - - - - 0.946 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
50. cox7a2a ENSDARG00000053217 12564 0.945 - - - - - - 0.945 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
51. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 0.945 - - - - - - 0.945 - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
52. calb2b ENSDARG00000036344 2417 0.944 - - - - - - 0.944 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
53. map3k1 ENSDARG00000098405 3043 0.944 - - - - - - 0.944 - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
54. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.943 - - - - - - 0.943 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
55. myo10 ENSDARG00000017004 2191 0.943 - - - - - - 0.943 - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
56. mid2 ENSDARG00000034871 1001 0.943 - - - - - - 0.943 - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
57. TMEM45A ENSDARG00000070743 1669 0.943 - - - - - - 0.943 - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
58. thrap3b ENSDARG00000098228 4396 0.943 - - - - - - 0.943 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
59. mrpl13 ENSDARG00000056903 2768 0.943 - - - - - - 0.943 - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
60. sipa1l2 ENSDARG00000061640 4545 0.943 - - - - - - 0.943 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
61. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 0.943 - - - - - - 0.943 - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
62. MAST1_1 MAST1_1 1595 0.942 - - - - - - 0.942 - -
63. eif2d ENSDARG00000012929 2624 0.942 - - - - - - 0.942 - - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
64. m6pr ENSDARG00000018432 1411 0.942 - - - - - - 0.942 - - mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
65. CRELD1 794 0.941 - - - - - - 0.941 - - cysteine rich with EGF like domains 1
66. TUB ENSDARG00000062165, ENSDARG00000111083 871 0.941 - - - - - - 0.941 - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
67. zgc:73340 823 0.941 - - - - - - 0.941 - - zgc:73340
68. oxr1b ENSDARG00000063310 929 0.941 - - - - - - 0.941 - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
69. lamb2 ENSDARG00000002084 3265 0.94 - - - - - - 0.940 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
70. hoxc6a ENSDARG00000070343 2839 0.939 - - - - - - 0.939 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
71. ank1 ank1 5209 0.936 - - - - - - 0.936 - -
72. nfya ENSDARG00000042004, ENSDARG00000114231 6606 0.936 0.936 - - - - - - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
73. MYOM2_1 MYOM2_1 4054 0.935 - - - - - - 0.935 - -
74. IGFN1 IGFN1 5030 0.935 - - - - - - 0.935 - -
75. ube2v1 ENSDARG00000041875 5739 0.933 0.933 - - - - - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
76. rpl17 ENSDARG00000057556 60281 0.931 - - - - - - 0.931 - - ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
77. TMEM30B ENSDARG00000054122 1519 0.925 0.925 - - - - - - - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
78. actr2a ENSDARG00000052438 5838 0.925 0.925 - - - - - - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
79. fgfr2 ENSDARG00000058115 6743 0.92 0.920 - - - - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
80. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 0.919 0.919 - - - - - - - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
81. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 0.916 - - - - - - 0.916 - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
82. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 0.916 0.916 - - - - - - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
83. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 0.916 - - - - - - 0.916 - - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
84. col4a5 ENSDARG00000052063 19251 0.915 0.915 - - - - - - - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
85. perp ENSDARG00000063572 6423 0.915 0.915 - - - - - - - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
86. aclya ENSDARG00000099079 2324 0.913 0.913 - - - - - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
87. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.912 0.912 - - - - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
88. rps7 ENSDARG00000042566 57650 0.91 - - - - - - 0.910 - - ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
89. psmc1a ENSDARG00000030537 2799 0.908 0.908 - - - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
90. FAM110D FAM110D 3632 0.908 0.908 - - - - - - - -
91. carm1 ENSDARG00000018698 5599 0.907 0.907 - - - - - - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
92. gdap2 ENSDARG00000021569 1013 0.907 0.907 - - - - - - - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
93. hoxb3a ENSDARG00000029263 5493 0.906 0.906 - - - - - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
94. rims2a ENSDARG00000101606 1088 0.905 0.905 - - - - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
95. ppp4cb ENSDARG00000076439 1693 0.905 0.905 - - - - - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
96. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 0.904 0.904 - - - - - - - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
97. ppp2r2a ppp2r2a 5785 0.904 0.904 - - - - - - - -
98. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 0.904 0.904 - - - - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
99. cpne1 ENSDARG00000075536 4063 0.903 0.903 - - - - - - - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
100. taf6l ENSDARG00000079684 1408 0.903 0.903 - - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]

There are 301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA