Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for calm1b

Gene Name Gene ID Reads Annotation
calm1b ENSDARG00000034187 13158 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]










Genes with expression patterns similar to calm1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calm1b ENSDARG00000034187 13158 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
2. NRD1 NRD1 3486 3.44 0.852 0.958 - - 0.809 0.821 - - -
3. ndufv1 ENSDARG00000036438 8437 3.262 0.781 - 0.705 - - 0.844 - - 0.932 NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
4. ttnb ttnb 73721 3.159 0.736 - 0.841 - - 0.872 0.710 - -
5. myoz1b ENSDARG00000071445 13381 2.65 0.862 - 0.821 - - - 0.967 - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
6. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.634 0.929 - 0.784 - - 0.921 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
7. lama2 ENSDARG00000099390 24734 2.624 0.878 - 0.755 0.991 - - - - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
8. ldb3b ENSDARG00000099974 33615 2.622 0.773 - 0.914 0.935 - - - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
9. SYNPO2L SYNPO2L 6697 2.607 0.896 - 0.849 - - 0.862 - - -
10. BX324201.1 BX324201.1 3302 2.585 0.853 0.971 0.761 - - - - - -
11. nexn ENSDARG00000057317 10972 2.576 0.913 - 0.774 - - 0.889 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
12. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.575 0.941 - 0.750 - - - 0.884 - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
13. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.572 0.903 - 0.845 - - 0.824 - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
14. MYOT ENSDARG00000076312 1791 2.572 0.884 - 0.814 - - 0.874 - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
15. desma ENSDARG00000058656 30292 2.569 0.887 0.799 0.883 - - - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
16. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.569 0.788 - 0.869 0.912 - - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
17. cnbpb ENSDARG00000070922 14606 2.566 0.870 - - - 0.922 0.774 - - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
18. myl1 ENSDARG00000014196 98943 2.565 0.789 - 0.889 - - 0.887 - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
19. tnnt3a ENSDARG00000030270 112506 2.561 0.909 - 0.861 - - 0.791 - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
20. zgc:92518 ENSDARG00000016343 3837 2.558 0.927 - 0.793 - - 0.838 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
21. murca murca 6614 2.556 0.925 - 0.773 - - 0.858 - - -
22. acta1b ENSDARG00000055618 195597 2.542 0.890 - 0.902 - - 0.750 - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
23. trdn ENSDARG00000041779 4283 2.537 0.863 - 0.812 - - 0.862 - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
24. ndufs3 ENSDARG00000015385 7790 2.508 0.750 - - - - 0.791 0.967 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
25. ttna ttna 101197 2.504 0.850 - 0.874 - - - 0.780 - -
26. mybpc2b ENSDARG00000021265 9618 2.502 0.936 - 0.854 - - - - - 0.712 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
27. ckmb ENSDARG00000040565 505935 2.501 0.865 - 0.860 - - 0.776 - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
28. atp2a1 ENSDARG00000020574 291561 2.498 0.885 - 0.890 - - 0.723 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
29. NRAP ENSDARG00000009341 3565 2.496 0.862 - 0.779 - - 0.855 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
30. tgm2a ENSDARG00000070157 4516 2.495 0.921 - 0.832 - - 0.742 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
31. gcdh gcdh 1390 2.484 0.737 - - - - 0.799 0.948 - -
32. klhl41b ENSDARG00000006757 10762 2.484 0.903 - 0.737 - - 0.844 - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
33. AIMP1 ENSDARG00000060036 4136 2.47 0.861 - 0.743 - - 0.866 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
34. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 2.47 0.814 - - - - 0.860 - - 0.796 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
35. CR847973.1 ENSDARG00000115516 8754 2.467 0.857 - 0.796 - - 0.814 - - -
36. mylz3 ENSDARG00000017441 303597 2.467 0.878 - 0.833 - - 0.756 - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
37. EHBP1L1 EHBP1L1 2500 2.463 0.866 - 0.817 - - 0.780 - - -
38. fitm1 ENSDARG00000056464 1759 2.462 0.854 - 0.714 - - 0.894 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
39. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.451 0.859 - 0.800 - - 0.792 - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
40. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 2.446 0.818 - - - - 0.832 - - 0.796 prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
41. PTPLA PTPLA 4044 2.444 0.849 - 0.742 - - 0.853 - - -
42. mibp2 ENSDARG00000101844 17444 2.44 0.832 - - - 0.741 0.867 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
43. myom1a ENSDARG00000061249 10230 2.426 - - 0.855 - - 0.853 - - 0.718 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
44. stac3 ENSDARG00000098883 1765 2.422 0.832 - 0.732 - - 0.858 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
45. hhatlb ENSDARG00000005139 6674 2.416 0.802 - 0.795 - - 0.819 - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
46. dtnba ENSDARG00000077694 5483 2.41 0.882 - 0.719 - - 0.809 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
47. myoz2a ENSDARG00000012311 1373 2.409 0.746 - 0.821 - - 0.842 - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
48. sptb ENSDARG00000030490 7128 2.407 0.828 - 0.757 - - 0.822 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
49. mdh1b ENSDARG00000018008 3196 2.405 0.874 - 0.735 - - 0.796 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
50. tnnt2d ENSDARG00000002988 7590 2.402 0.889 - 0.811 - - 0.702 - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
51. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 2.399 0.813 - - - 0.864 0.722 - - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
52. rpsa ENSDARG00000019181 93440 2.391 0.755 0.804 - 0.832 - - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
53. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 2.389 0.704 - - - - 0.713 0.972 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
54. CABZ01113191.1 CABZ01113191.1 388 2.379 0.726 - - - - 0.848 - - 0.805
55. si:ch211-226o13.2 84923 2.366 0.729 - 0.899 - - 0.738 - - - si:ch211-226o13.2
56. sucla2 ENSDARG00000005359 5992 2.364 0.773 - 0.795 - - 0.796 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
57. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.341 0.805 - 0.742 - - 0.794 - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
58. serbp1a ENSDARG00000074242 10818 2.322 0.710 - - - 0.832 0.780 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
59. METTL21C METTL21C 1717 2.307 0.785 - 0.721 - - 0.801 - - -
60. acsl1 acsl1 4216 2.285 0.770 - 0.702 - - 0.813 - - -
61. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.282 0.777 - 0.741 - - 0.764 - - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
62. tmem47 ENSDARG00000057322 4691 2.205 0.742 - - - - 0.718 - 0.745 - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
63. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.178 0.723 - 0.724 - - 0.731 - - -
64. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.935 - - - 0.991 - - 0.944 - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
65. txlnbb ENSDARG00000076241 6396 1.875 0.922 - - - - 0.953 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
66. klhl40b ENSDARG00000019125 3633 1.867 0.899 0.968 - - - - - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
67. dldh ENSDARG00000008785 15202 1.856 - 0.979 - - - - - 0.877 - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
68. sf3a1 ENSDARG00000041887 6702 1.848 - 0.858 - 0.990 - - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
69. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.841 0.927 - - - - 0.914 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
70. casq2 ENSDARG00000008982 21802 1.836 0.965 - 0.871 - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
71. fxr1 ENSDARG00000022968 2831 1.828 0.921 - - - - 0.907 - - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
72. smyd2a ENSDARG00000055151 2505 1.821 0.851 0.970 - - - - - - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
73. TMEM255A ENSDARG00000073911 924 1.821 - - - - - 0.876 0.945 - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
74. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.819 0.958 - - - - 0.861 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
75. tpma ENSDARG00000033683 752432 1.815 0.910 - 0.905 - - - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
76. luc7l3 ENSDARG00000014366 4416 1.803 - - - 0.990 0.813 - - - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
77. myhz1.3 ENSDARG00000067997 155509 1.795 0.934 - 0.861 - - - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
78. flncb ENSDARG00000018820 5595 1.794 0.894 - - - - 0.900 - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
79. pmm2 ENSDARG00000037654 1783 1.788 - 0.949 - - 0.839 - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
80. CR354540.2 ENSDARG00000117517 18452 1.787 0.908 - 0.879 - - - - - -
81. tnni2a.4 ENSDARG00000029069 122344 1.782 0.956 - 0.826 - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
82. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 1.78 0.921 - 0.859 - - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
83. zgc:158296 ENSDARG00000070923 3935 1.779 - - 0.860 - - 0.919 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
84. atp1b3b ENSDARG00000042837 5163 1.776 0.907 - - - - 0.869 - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
85. anxa6 ENSDARG00000013335 3588 1.774 - - - - - 0.884 - - 0.890 annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
86. PTP4A3 ENSDARG00000039997 3814 1.772 0.878 - - - - 0.894 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
87. alpk2 ENSDARG00000079637 1483 1.768 0.870 - - - - 0.898 - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
88. SYNPO2 SYNPO2 7382 1.766 - - 0.848 - - 0.918 - - -
89. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.76 0.841 - - - - 0.919 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
90. pvalb4 ENSDARG00000024433 35736 1.759 0.911 - 0.848 - - - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
91. vcl vcl 6667 1.758 0.857 - 0.901 - - - - - -
92. dtna ENSDARG00000031015 1746 1.756 0.808 - - - - - 0.948 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
93. ryr3 ENSDARG00000071331 6795 1.754 0.854 - - - - 0.900 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
94. smtnl1 ENSDARG00000041257 7410 1.752 0.882 - - - - 0.870 - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
95. actn3b ENSDARG00000001431 15747 1.751 0.929 - 0.822 - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
96. hhatla ENSDARG00000039051 6598 1.744 0.870 - 0.874 - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
97. myod1 ENSDARG00000030110 6019 1.744 0.906 - - - - 0.838 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
98. vdac3 ENSDARG00000003695 16776 1.743 0.814 0.929 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
99. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.742 0.897 - 0.845 - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
100. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.74 0.910 - 0.830 - - - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]

There are 1650 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA