Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for calm1a

Gene Name Gene ID Reads Annotation
calm1a ENSDARG00000021811 4791 calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]










Genes with expression patterns similar to calm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calm1a ENSDARG00000021811 4791 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
2. nxf1 ENSDARG00000055076 3251 3.269 - 0.989 - - 0.855 0.715 0.710 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
3. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 3.224 - - 0.720 - 0.890 0.821 0.793 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
4. snrpd3l ENSDARG00000076283 7655 3.171 - 0.920 - - 0.743 0.707 0.801 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
5. atp6v0cb ENSDARG00000036577 3472 2.707 - - - - 0.934 0.925 0.848 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
6. msi1 ENSDARG00000010710 2634 2.672 - - - - 0.906 0.921 0.845 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
7. UBE2QL1 ENSDARG00000079276 3474 2.656 - - - - 0.895 0.859 0.902 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
8. hmp19 2554 2.627 - 0.996 - - - 0.850 0.781 - - HMP19 protein
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.621 - - - - 0.872 0.924 0.825 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. TUBB8P7_1 TUBB8P7_1 2722 2.608 - - - - 0.891 0.932 0.785 - -
11. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.59 - - - - 0.856 0.923 0.811 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
12. hoxc1a ENSDARG00000070337 1460 2.561 - 0.996 - - - 0.808 0.757 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
13. nrarpb ENSDARG00000018958 6225 2.54 - - - - 0.791 0.907 0.842 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
14. tmem35 ENSDARG00000052567 5685 2.537 - - - - 0.851 0.860 0.826 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
15. marcksa ENSDARG00000004049 2518 2.515 - - - - 0.841 0.838 0.836 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
16. lgi1a ENSDARG00000020493 1218 2.498 - - - - 0.898 0.894 0.706 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
17. stx1b ENSDARG00000000503 2724 2.493 - - - - - 0.948 0.818 - 0.727 syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
18. scube2 ENSDARG00000037362 2833 2.491 - - - - 0.854 0.867 0.770 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
19. st8sia2 ENSDARG00000018788 2183 2.469 - - - - - 0.846 0.798 0.825 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
20. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.462 - - - - - 0.906 0.826 - 0.730 synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
21. RNF145 RNF145 1364 2.453 - - - - - 0.778 0.825 0.850 -
22. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.451 - - - - 0.870 0.737 0.844 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
23. znf865 ENSDARG00000036698 15532 2.449 - - - - 0.824 0.779 0.846 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
24. ttyh2 ENSDARG00000016934 1868 2.439 - - - - 0.932 0.709 0.798 - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
25. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.426 - - - - - 0.853 0.724 0.849 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
26. supt6h ENSDARG00000006524 3221 2.394 - - 0.760 - 0.833 - 0.801 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
27. ccdc28b ENSDARG00000011222 528 2.393 - - - - 0.893 0.710 0.790 - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
28. zic2a ENSDARG00000015554 2860 2.385 - - - - - 0.805 0.777 0.803 - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
29. FGFBP3 FGFBP3 993 2.371 - - - - - 0.802 0.786 0.783 -
30. sumo3a ENSDARG00000028119 13447 2.346 0.716 - - - - 0.862 0.768 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
31. nptx1l ENSDARG00000074671 569 2.328 - - - - - 0.756 0.732 0.840 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
32. znf292a ENSDARG00000016763 2253 2.323 - - - - - 0.763 0.734 0.826 - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
33. CASK CASK 1750 2.299 - - 0.751 - - 0.817 0.731 - -
34. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 2.202 - - 0.712 - - 0.788 0.702 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
35. map2 ENSDARG00000055052 6062 1.83 - 0.996 - - - - 0.834 - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
36. hmgb3a ENSDARG00000056725 15668 1.828 - - - - - 0.935 0.893 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
37. lztfl1 ENSDARG00000105010 1697 1.826 - 0.996 - - - - - 0.830 - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
38. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.816 - 0.996 - - 0.820 - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
39. nefma ENSDARG00000021351 790 1.806 - - - - 0.893 0.913 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
40. TUBA1A ENSDARG00000001889 25294 1.804 - - - - - 0.952 0.852 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
41. BX511086.1 BX511086.1 8308 1.797 - - - - - 0.882 0.915 - -
42. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.797 - - - - - 0.936 0.861 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
43. msi2b ENSDARG00000032614 3095 1.797 - 0.993 - - - - - 0.804 - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
44. snap25a ENSDARG00000020609 4537 1.793 - - - - - 0.940 0.853 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
45. PRRT2 ENSDARG00000103588 913 1.791 - - - - - 0.945 0.846 - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
46. IM:7163548 IM:7163548 6540 1.791 - 0.996 - - - 0.795 - - -
47. epha4b ENSDARG00000011600 3110 1.787 - - - - - 0.925 0.862 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
48. dpysl3 ENSDARG00000002587 4381 1.787 - - - - - 0.930 0.857 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
49. tuba1c ENSDARG00000055216 8384 1.784 - - - - - 0.947 0.837 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
50. aldocb ENSDARG00000019702 2111 1.781 - - - - - 0.928 0.853 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
51. kcnc3a ENSDARG00000055855 1821 1.781 - - - - - 0.952 0.829 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
52. EFCC1 ENSDARG00000077826 1359 1.78 - - - - - 0.916 0.864 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
53. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.776 - - - - - 0.926 0.850 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
54. hoxa9b ENSDARG00000056819 3081 1.776 - - - - - 0.910 0.866 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
55. myt1b ENSDARG00000102879 5411 1.774 - - - - - 0.934 0.840 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
56. acsl1 acsl1 4216 1.774 - 0.995 - - - - - 0.779 -
57. hoxa9a ENSDARG00000105013 1509 1.772 - - - - - 0.930 0.842 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
58. sh3gl2 sh3gl2 1305 1.771 - - - - - 0.949 0.822 - -
59. eif3g ENSDARG00000016889 10367 1.77 - 0.977 - - - - 0.793 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
60. CR548630.1 CR548630.1 3301 1.77 - - - - 0.872 0.898 - - -
61. ckbb ENSDARG00000043257 3503 1.769 - - - - - 0.966 0.803 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
62. nova2 ENSDARG00000017673 7685 1.769 - - - - - 0.951 0.818 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
63. pcdh1gc5 ENSDARG00000104826 10052 1.768 - - - - - 0.926 0.842 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
64. rtn1b ENSDARG00000021143 1682 1.767 - - - - - 0.911 0.856 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
65. TNRC6C_2 TNRC6C_2 2444 1.767 - - - - - 0.911 0.856 - -
66. mllt11 ENSDARG00000071026 2518 1.766 - - - - - 0.943 0.823 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
67. AKT3 AKT3 1729 1.765 - - - - - 0.931 0.834 - -
68. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.762 - - - - - 0.935 0.827 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
69. tmeff1b ENSDARG00000056740 11253 1.762 - - - - - 0.939 0.823 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
70. slc1a3a ENSDARG00000104431 9888 1.761 - - - - - 0.930 0.831 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
71. hoxc8a ENSDARG00000070346 4252 1.759 - - - - - 0.880 0.879 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
72. pygo2 ENSDARG00000036772 2510 1.757 - - - - 0.930 - 0.827 - - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
73. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.757 - - - - - 0.934 0.823 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
74. dnajc5aa ENSDARG00000042948 2885 1.757 - - - - - 0.921 0.836 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
75. pacsin1b ENSDARG00000042128 1051 1.756 - - - - - 0.892 0.864 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
76. gfap ENSDARG00000025301 5584 1.756 - - - - - 0.928 0.828 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
77. slc32a1 ENSDARG00000059775 1092 1.753 - - - - - 0.925 0.828 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
78. hmgb1b ENSDARG00000030479 10398 1.752 - - - - - 0.901 0.851 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
79. vsnl1b ENSDARG00000044053 1120 1.751 - - - - - 0.956 0.795 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
80. stxbp1a ENSDARG00000001994 5154 1.75 - - - - - 0.894 0.856 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
81. gap43 ENSDARG00000099744 4114 1.748 - - - - - 0.903 0.845 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
82. nell2b ENSDARG00000062797 854 1.747 - - - - - 0.922 0.825 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
83. nova1 ENSDARG00000020178 4129 1.746 - - - - - 0.930 0.816 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
84. SPOCK1 ENSDARG00000074644 794 1.744 - - - - - 0.912 0.832 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
85. itm2ca ENSDARG00000043448 1265 1.744 - - - - - 0.944 0.800 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
86. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.74 - - - - - 0.821 0.919 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
87. grin1a ENSDARG00000027828 1327 1.74 - - - - - 0.919 0.821 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
88. slc18a3a ENSDARG00000006356 1285 1.74 - - - - - 0.914 0.826 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
89. rbfox3 rbfox3 1443 1.739 - - - - - 0.924 0.815 - -
90. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 1.739 - - - - - 0.908 0.831 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
91. casc5 1487 1.739 - - - - 0.875 - - 0.864 - cancer susceptibility candidate 5, transcript variant X3
92. ZFHX3 ENSDARG00000103057 7759 1.738 - - - - - 0.903 0.835 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
93. smarce1 ENSDARG00000016871 9628 1.737 - - - - - 0.859 0.878 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
94. scn8aa ENSDARG00000005775 792 1.736 - - - - - 0.931 0.805 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
95. negr1 ENSDARG00000021607 1051 1.735 - - - - - 0.901 0.834 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
96. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.735 - - - - 0.939 0.796 - - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
97. fam60al 2846 1.734 - - - - - 0.868 0.866 - - family with sequence similarity 60, member A, like
98. sall3b ENSDARG00000057586 982 1.733 - - - - - 0.939 0.794 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
99. lrrc4.1 ENSDARG00000069402 323 1.733 - - - - - 0.911 0.822 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
100. SEMA7A ENSDARG00000078707 465 1.732 - - - - - 0.930 0.802 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]

There are 2054 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA