Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for calb1

Gene Name Gene ID Reads Annotation
calb1 ENSDARG00000031598 252 calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]










Genes with expression patterns similar to calb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calb1 ENSDARG00000031598 252 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
2. slc1a2b ENSDARG00000102453 3136 3.499 0.891 0.829 - - - 0.916 0.863 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
3. amph ENSDARG00000007663 599 3.451 0.803 0.909 - - - 0.867 0.872 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
4. scn8aa ENSDARG00000005775 792 3.438 0.935 0.754 - - - 0.867 0.882 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
5. nptx1l ENSDARG00000074671 569 3.437 0.771 0.918 - - - 0.858 0.890 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
6. scn2b ENSDARG00000101713 796 3.423 0.897 0.909 - - - 0.781 0.836 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
7. syt11a ENSDARG00000057913 1145 3.42 0.878 0.902 - - - 0.776 0.864 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
8. stx1b ENSDARG00000000503 2724 3.419 0.865 0.814 - - - 0.874 0.866 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
9. MAP1A MAP1A 847 3.406 0.934 0.811 - - - 0.859 0.802 - -
10. sez6l2 ENSDARG00000076052 360 3.383 0.759 0.907 - - - 0.881 0.836 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
11. rtn1b ENSDARG00000021143 1682 3.381 0.797 0.783 - - - 0.880 0.921 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
12. snap25a ENSDARG00000020609 4537 3.375 0.842 0.811 - - - 0.918 0.804 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
13. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.374 0.848 0.777 - - - 0.833 0.916 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
14. lhx1a ENSDARG00000014018 958 3.373 0.793 0.903 - - - 0.914 0.763 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
15. rbfox3 rbfox3 1443 3.351 0.790 0.833 - - - 0.858 0.870 - -
16. SV2B SV2B 208 3.337 0.840 0.909 - - - 0.868 0.720 - -
17. gng3 ENSDARG00000009553 2530 3.329 0.763 0.929 - - - 0.774 0.863 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
18. pou4f1 ENSDARG00000005559 821 3.324 0.863 - - - - 0.872 0.810 0.779 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
19. syngr3a ENSDARG00000014871 405 3.287 0.820 0.806 - - - 0.743 0.918 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
20. stmn2a ENSDARG00000033234 2272 3.263 0.898 0.702 - - - 0.826 0.837 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
21. TUSC5 TUSC5 1436 3.236 0.822 0.701 - - - 0.904 0.809 - -
22. pcsk1nl ENSDARG00000076170 1232 3.232 0.832 0.745 - - - 0.813 0.842 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
23. syt4 ENSDARG00000036505 421 3.192 0.900 0.815 - - - 0.766 0.711 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
24. lgi2a ENSDARG00000111069 965 3.183 0.890 0.743 - - - 0.740 - 0.810 - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
25. jag1a ENSDARG00000030289 1275 3.006 0.743 0.736 - - - 0.715 0.812 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
26. KCNAB2 KCNAB2 129 2.785 0.922 1.000 - - - - 0.863 - -
27. GJD2_1 GJD2_1 3045 2.761 0.856 1.000 - - - - 0.905 - -
28. cacng3b ENSDARG00000076401 91 2.74 0.912 1.000 - - - - 0.828 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
29. TUBB2A TUBB2A 142 2.725 0.963 1.000 - - - 0.762 - - -
30. fam219ab ENSDARG00000013813 591 2.721 - 1.000 - - - 0.858 0.863 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
31. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.708 0.891 - - - - 0.911 0.906 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
32. SKOR2 SKOR2 1041 2.697 0.987 - - - - 0.894 0.816 - -
33. slc17a6b ENSDARG00000041150 823 2.689 - 1.000 - - - 0.791 0.898 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
34. si:ch211-138k19.2 si:ch211-138k19.2 398 2.679 0.866 1.000 - - - - 0.813 - -
35. ROBO3_1 ROBO3_1 468 2.678 - - - - - 0.815 0.885 0.978 -
36. TUBB8P7_1 TUBB8P7_1 2722 2.654 0.915 - - - - 0.934 0.805 - -
37. rusc1 ENSDARG00000078125 617 2.64 0.891 - - - - 0.835 0.914 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
38. nrxn2a ENSDARG00000061454 291 2.639 0.979 0.881 - - - - 0.779 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
39. gsx1 ENSDARG00000035735 1243 2.632 0.870 - - - - 0.878 0.884 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
40. camk1da ENSDARG00000074905, ENSDARG00000111604 479 2.624 - - - - - 0.834 0.828 0.962 - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
41. stmn2b ENSDARG00000070537 1586 2.62 0.919 - - - - 0.864 0.837 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
42. mllt11 ENSDARG00000071026 2518 2.615 0.875 - - - - 0.881 0.859 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
43. scrt2 ENSDARG00000056175 4331 2.613 - 0.895 - - - 0.883 0.835 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
44. eno2 ENSDARG00000014287 2162 2.606 0.913 - - - - 0.777 0.916 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
45. spock2 ENSDARG00000075393 791 2.603 0.880 - - - - 0.821 0.902 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
46. atp2b3b ENSDARG00000023445 1424 2.601 0.885 - - - - 0.864 0.852 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
47. olfm1b ENSDARG00000014053 1392 2.598 0.881 - - - - 0.862 0.855 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
48. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.597 0.900 - - - - 0.938 0.759 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
49. nmnat2 ENSDARG00000004580 370 2.597 0.855 - - - - 0.875 0.867 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
50. C9H2orf69 C9H2orf69 148 2.596 0.912 - - - - - 0.715 0.969 -
51. adcyap1b ENSDARG00000027740 1539 2.592 0.861 - - - - 0.885 0.846 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
52. MAP6 MAP6 643 2.591 0.840 0.927 - - - - 0.824 - -
53. fez1 ENSDARG00000023174 701 2.588 0.916 - - - - 0.856 0.816 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
54. neflb ENSDARG00000012426 298 2.585 - 1.000 - - - 0.744 0.841 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
55. nrn1a ENSDARG00000071860 1311 2.582 0.857 - - - - 0.827 0.898 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
56. si:ch211-152f6.6 si:ch211-152f6.6 278 2.582 0.814 0.946 - - - - 0.822 - -
57. slc1a3a ENSDARG00000104431 9888 2.581 0.792 - - - - 0.865 0.924 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
58. add2 ENSDARG00000074581 1402 2.577 0.915 - - - - 0.766 0.896 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
59. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.576 - 0.788 - - - 0.868 0.920 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
60. rap2ip rap2ip 681 2.574 - 0.907 - - - 0.808 0.859 - -
61. nacad ENSDARG00000012347 1268 2.57 0.890 - - - - 0.776 0.904 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
62. zic1 ENSDARG00000015567 2520 2.568 0.874 - - - - 0.787 0.907 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
63. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.568 0.876 - - - - 0.859 0.833 - -
64. rab3ab ENSDARG00000043835 1267 2.565 0.792 - - - - 0.908 0.865 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
65. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.562 0.883 - - - - 0.817 0.862 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
66. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.556 0.882 0.763 - - - - 0.911 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
67. slc17a6a ENSDARG00000001127 337 2.552 0.717 1.000 - - - - 0.835 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
68. vamp1 ENSDARG00000031283 3094 2.549 0.800 - - - - 0.867 - 0.882 - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
69. gap43 ENSDARG00000099744 4114 2.546 0.846 - - - - 0.815 0.885 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
70. sncgb ENSDARG00000109715 1014 2.542 0.889 - - - - 0.898 0.755 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
71. SPOCK1 ENSDARG00000074644 794 2.54 0.818 - - - - 0.830 0.892 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
72. ndrg4 ENSDARG00000103937 1234 2.52 0.963 - - - - 0.742 0.815 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
73. cadm3 ENSDARG00000057013 1545 2.514 0.875 - - - - 0.878 0.761 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
74. necap1 ENSDARG00000020798 612 2.514 0.764 - - - - 0.880 0.870 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
75. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.51 0.950 - - - - 0.719 0.841 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
76. atp6v0cb ENSDARG00000036577 3472 2.505 0.798 - - - - 0.799 0.908 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
77. sh3gl2 sh3gl2 1305 2.503 0.822 - - - - 0.879 0.802 - -
78. stmn1b ENSDARG00000033655 9491 2.499 0.773 - - - - 0.831 0.895 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
79. rgs20 ENSDARG00000038859 331 2.499 - - - - - 0.725 0.839 0.935 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
80. map7d2a ENSDARG00000068480 513 2.498 0.862 - - - - 0.783 0.853 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
81. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.497 0.734 - - - - 0.857 0.906 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
82. si:dkey-245p14.4 ENSDARG00000070320 418 2.496 0.955 0.825 - - - 0.716 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
83. SHANK1 ENSDARG00000060539 102 2.495 0.947 - - - - 0.771 0.777 - - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
84. dpysl3 ENSDARG00000002587 4381 2.495 0.818 - - - - 0.817 0.860 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
85. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 2.494 0.747 0.909 - - - 0.838 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
86. snap25b ENSDARG00000058117 469 2.494 0.765 - - - - 0.812 0.917 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
87. slc32a1 ENSDARG00000059775 1092 2.493 0.743 - - - - 0.904 0.846 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
88. tuba1c ENSDARG00000055216 8384 2.492 0.760 - - - - 0.866 0.866 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
89. NEFH NEFH 101 2.49 0.958 - - - - 0.738 0.794 - -
90. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.483 0.775 - - - - 0.922 0.786 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
91. lhx5 ENSDARG00000057936 785 2.482 0.808 - - - - 0.906 0.768 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
92. zic6 ENSDARG00000071496 402 2.478 0.826 0.907 - - - 0.745 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
93. KCNS3 KCNS3 82 2.475 - 1.000 - - - 0.714 0.761 - -
94. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.464 - 0.815 - - - 0.911 0.738 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
95. APBB3 ENSDARG00000053771 654 2.463 0.910 - - - - 0.709 0.844 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
96. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.452 0.839 - - - - 0.778 0.835 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
97. LRRN3 LRRN3 261 2.452 0.829 0.752 - - - - 0.871 - -
98. dnajc5aa ENSDARG00000042948 2885 2.45 0.707 - - - - 0.823 0.920 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
99. cdk5r1b ENSDARG00000045087 2075 2.445 0.884 - - - - 0.790 0.771 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
100. adam11 ENSDARG00000079204 298 2.439 0.765 - - - - 0.823 0.851 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]

There are 2162 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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