Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cacnb3a

Gene Name Gene ID Reads Annotation
cacnb3a ENSDARG00000001881, ENSDARG00000110795, ENSDARG00000113797 27 calcium channel, voltage-dependent, beta 3a [Source:ZFIN;Acc:ZDB-GENE-060221-2]










Genes with expression patterns similar to cacnb3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cacnb3a ENSDARG00000001881, ENSDARG00000110795, ENSDARG00000113797 27 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 calcium channel, voltage-dependent, beta 3a [Source:ZFIN;Acc:ZDB-GENE-060221-2]
2. si:dkey-27c15.3 ENSDARG00000056847 37 1.852 1.000 - - - 0.852 - - - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
3. KHNYN ENSDARG00000092488 10 1.841 - - - - 0.998 0.843 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
4. esyt1b ENSDARG00000014239 8 1.836 0.841 - - - 0.995 - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
5. si:ch211-42i9.5 si:ch211-42i9.5 21 1.731 0.841 - - - - 0.890 - - -
6. sorcs3b ENSDARG00000077349 72 1.727 0.841 - - - - 0.886 - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
7. CABZ01021435.3 CABZ01021435.3 5 1.684 0.841 - - - - 0.843 - - -
8. pou2f2b pou2f2b 134 1.678 0.841 - - - - 0.837 - - -
9. tdrd5 ENSDARG00000071450 25 1.656 0.756 - - - 0.900 - - - - tudor domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-502]
10. secisbp2 ENSDARG00000073892 79 1.642 0.915 - - - - 0.727 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
11. KBTBD13_1 KBTBD13_1 116 1.631 - - - - 0.800 0.831 - - -
12. mylkb ENSDARG00000004753 95 1.609 - - 0.766 - - 0.843 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
13. slc5a9 ENSDARG00000005518 16 1.588 0.841 - - - - 0.747 - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
14. cd74b ENSDARG00000036628 8 1.58 0.841 - - 0.739 - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
15. RIMBP2_1 RIMBP2_1 57 1.57 - - - - 0.791 0.779 - - -
16. CABZ01021426.1 CABZ01021426.1 25 1.561 - - - - - 0.843 - 0.718 -
17. pus3 ENSDARG00000028976 52 1.548 0.745 - - - 0.803 - - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
18. cdkl5 ENSDARG00000015240 68 1.534 0.734 - - - - 0.800 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
19. mir124-2 196 1.511 - - - - 0.702 0.809 - - - microRNA 124-2
20. dph1 ENSDARG00000057973 191 1.476 - - - - 0.764 0.712 - - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
21. nub1 ENSDARG00000061417 33 1 1.000 - - - - - - - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
22. ENSDARG00000086520 ENSDARG00000086520 26 1 1.000 - - - - - - - -
23. il6st ENSDARG00000104693 55 1 1.000 - - - - - - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
24. ZC2HC1C ENSDARG00000070526 14 1 1.000 - - - - - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
25. mettl22 ENSDARG00000077863 81 1 1.000 - - - - - - - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
26. CR589947.1 ENSDARG00000079269 5 0.998 - - - - 0.998 - - - -
27. slc12a8 ENSDARG00000074384 12 0.998 - - - - 0.998 - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
28. fn3krp ENSDARG00000098208 4 0.998 - - - - 0.998 - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
29. PEG3_13 PEG3_13 5 0.998 - - - - 0.998 - - - -
30. NXPH4 11 0.997 - - - - 0.997 - - - - neurexophilin 4
31. PLEKHA1 PLEKHA1 5 0.997 - - - - 0.997 - - - -
32. BX324142.3 BX324142.3 5 0.996 - - - - 0.996 - - - -
33. BX510926.2 BX510926.2 12 0.996 - - - - 0.996 - - - -
34. CR407704.1 CR407704.1 188 0.993 - - - - - 0.993 - - -
35. mylk3 ENSDARG00000076348 19 0.993 - - - - 0.993 - - - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
36. si:ch211-197g15.7 ENSDARG00000071355 26 0.986 - - - - 0.986 - - - - si:ch211-197g15.7 [Source:ZFIN;Acc:ZDB-GENE-030131-4763]
37. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 0.982 - - - - 0.982 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
38. CABZ01071530.2 CABZ01071530.2 47 0.972 - - - - 0.972 - - - -
39. si:ch211-133l5.8 ENSDARG00000027676 23 0.971 - - - - 0.971 - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
40. rapgef5b ENSDARG00000074307 112 0.968 - - - - - 0.968 - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
41. got1l1 ENSDARG00000053644 49 0.965 0.965 - - - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
42. btr16 ENSDARG00000028850 21 0.965 0.965 - - - - - - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
43. si:dkey-284e7.2 si:dkey-284e7.2 14 0.963 - - - - 0.963 - - - -
44. C18H15orf59 C18H15orf59 80 0.959 - - - - - 0.959 - - -
45. nefla ENSDARG00000057568 62 0.958 - - - - - 0.958 - - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
46. ncam2 ENSDARG00000017466 175 0.956 - - - - - 0.956 - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
47. efna3b ENSDARG00000098295 319 0.954 - - - - - 0.954 - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
48. gpr173 ENSDARG00000042922 238 0.954 - - - - - 0.954 - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
49. gphnb ENSDARG00000100851 118 0.948 - - - - - 0.948 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
50. UBASH3B_1 UBASH3B_1 28 0.946 - - - - 0.946 - - - -
51. si:dkey-66g10.2 ENSDARG00000092845 28 0.944 - - - - 0.944 - - - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
52. agpat9 agpat9 938 0.942 - - - - 0.942 - - - -
53. tpd52l1 ENSDARG00000042548 61 0.942 - - - - 0.942 - - - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
54. dscama ENSDARG00000024865 75 0.941 - - - - - 0.941 - - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
55. RAC1_2 RAC1_2 51 0.94 0.940 - - - - - - - -
56. LRFN2 118 0.94 0.940 - - - - - - - - leucine rich repeat and fibronectin type III domain containing 2
57. BAI1_1 BAI1_1 57 0.939 - - - - - 0.939 - - -
58. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 0.937 - - - - - 0.937 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
59. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 0.935 - - - - 0.935 - - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
60. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 0.933 - - - - 0.933 - - - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
61. aanat2 ENSDARG00000079802 175 0.932 - - - - 0.932 - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
62. slc35g2b ENSDARG00000045447 378 0.932 - - - - - 0.932 - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
63. steap4 ENSDARG00000055901 61 0.932 - - - - 0.932 - - - - STEAP family member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-244]
64. CACNA2D2 CACNA2D2 7 0.93 - - - - - 0.930 - - -
65. sox19b ENSDARG00000040266 532 0.928 - - - - - 0.928 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
66. TUBB8P7_2 TUBB8P7_2 565 0.926 - - - - - 0.926 - - -
67. dtnbp1b ENSDARG00000055206 64 0.926 - - - - - 0.926 - - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
68. SLC35F4 ENSDARG00000103124 55 0.925 - - - - - 0.925 - - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
69. CR974475.2 CR974475.2 38 0.925 - - - - - 0.925 - - -
70. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 0.925 - - - - - 0.925 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
71. neto1l ENSDARG00000071596 57 0.922 - - - - - 0.922 - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
72. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.917 - - - - - 0.917 - - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
73. ntrk2a ENSDARG00000059897 185 0.917 - - - - - 0.917 - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
74. gabrg2 ENSDARG00000053665 434 0.917 - - - - - 0.917 - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
75. si:ch1073-418f12.2 si:ch1073-418f12.2 15 0.914 - - - - 0.914 - - - -
76. GRM8_1 GRM8_1 85 0.914 - - - - - 0.914 - - -
77. tmem59l ENSDARG00000003655 1536 0.912 - - - - - 0.912 - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
78. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 0.911 - - - - 0.911 - - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
79. map7d2b ENSDARG00000045316 702 0.909 - - - - - 0.909 - - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
80. arhgef19 ENSDARG00000078853 17 0.907 - - - - 0.907 - - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
81. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.906 - - - - - 0.906 - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
82. cntn5 ENSDARG00000021584 30 0.905 - - - - - 0.905 - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
83. CABZ01007222.1 CABZ01007222.1 78 0.904 - - - - - 0.904 - - -
84. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.904 - - - - - 0.904 - - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
85. si:ch211-10a23.2 ENSDARG00000060656 471 0.904 - - - - - 0.904 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
86. si:dkeyp-77h1.4 ENSDARG00000058248 54 0.903 - - - - - 0.903 - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
87. slitrk3b ENSDARG00000074739 19 0.903 - - - - - 0.903 - - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
88. CABZ01079241.1 ENSDARG00000098424 88 0.903 - - - - - 0.903 - - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
89. KCNJ3 KCNJ3 24 0.903 - - - - - 0.903 - - -
90. MAP3K2 ENSDARG00000062884 34 0.903 - - - - - 0.903 - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
91. chst1 ENSDARG00000088593, ENSDARG00000112011 102 0.903 - - - - - 0.903 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
92. TMEM74 26 0.903 - - - - - 0.903 - - - transmembrane protein 74, transcript variant X3
93. KIF2A_1 ENSDARG00000043571 189 0.903 - - - - 0.903 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
94. si:ch211-219f7.3 si:ch211-219f7.3 48 0.902 0.902 - - - - - - - -
95. her8.2 ENSDARG00000069675 315 0.902 - - - - - 0.902 - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
96. her4.3 ENSDARG00000070770 613 0.9 - - - - - 0.900 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
97. UBL7 UBL7 197 0.899 - - - - 0.899 - - - -
98. notch1a ENSDARG00000103554 498 0.898 - - - - - 0.898 - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
99. hmx3 hmx3 510 0.897 - - - - - 0.897 - - -
100. C1QL4 C1QL4 93 0.896 - - - - - 0.896 - - -

There are 925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA