Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cacna1da

Gene Name Gene ID Reads Annotation
cacna1da ENSDARG00000102773 114 calcium channel, voltage-dependent, L type, alpha 1D subunit, a [Source:ZFIN;Acc:ZDB-GENE-030616-135]










Genes with expression patterns similar to cacna1da

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cacna1da ENSDARG00000102773 114 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium channel, voltage-dependent, L type, alpha 1D subunit, a [Source:ZFIN;Acc:ZDB-GENE-030616-135]
2. sox19b ENSDARG00000040266 532 2.536 0.798 - - - - 0.835 0.903 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
3. BSN BSN 463 2.458 0.876 - - - - 0.721 0.861 - -
4. gabrg2 ENSDARG00000053665 434 2.435 0.880 - - - - 0.797 0.758 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
5. kcnd1 ENSDARG00000074746 153 2.358 0.890 - - - - 0.724 0.744 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
6. rheb ENSDARG00000090213 1432 2.336 0.870 - - - - 0.756 0.710 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
7. si:dkey-17e6.2 si:dkey-17e6.2 72 2.323 0.779 - - - - 0.790 0.754 - -
8. TUBB8P7_2 TUBB8P7_2 565 2.317 0.845 - - - - 0.707 0.765 - -
9. map7d2a ENSDARG00000068480 513 2.284 0.839 - - - - 0.709 0.736 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
10. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.257 0.776 - - - - 0.737 0.744 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
11. C8H1orf106 C8H1orf106 2690 2.232 0.748 - - - - 0.717 0.767 - -
12. tmem59l ENSDARG00000003655 1536 2.229 0.749 - - - - 0.738 0.742 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
13. C21H5orf24 C21H5orf24 333 2.218 0.737 - - - - 0.703 0.778 - -
14. jag1a ENSDARG00000030289 1275 2.189 0.716 - - - - 0.764 0.709 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
15. SKOR2 SKOR2 1041 1.743 0.949 - - - - - 0.794 - -
16. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.741 0.992 - - - - - 0.749 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
17. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.739 0.894 - - - - 0.845 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
18. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.735 0.932 - - - - - 0.803 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
19. CR407704.1 CR407704.1 188 1.733 0.975 - - - - 0.758 - - -
20. GJD2_1 GJD2_1 3045 1.729 0.910 - - - - - 0.819 - -
21. CAMSAP3 ENSDARG00000059475 263 1.727 0.974 - - - - - 0.753 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
22. MAP1A MAP1A 847 1.726 0.881 - - - - - 0.845 - -
23. scn8aa ENSDARG00000005775 792 1.72 0.904 - - - - - 0.816 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
24. PPP1R3E PPP1R3E 340 1.703 0.861 - - - - 0.842 - - -
25. sncgb ENSDARG00000109715 1014 1.701 0.932 - - - - - 0.769 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
26. rusc1 ENSDARG00000078125 617 1.692 0.826 - - - - - 0.866 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
27. znf804a ENSDARG00000027079 121 1.69 0.909 - - - - 0.781 - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
28. fez1 ENSDARG00000023174 701 1.688 0.897 - - - - - 0.791 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
29. LRRN3 LRRN3 261 1.688 0.919 - - - - - 0.769 - -
30. KIF1A KIF1A 1686 1.682 0.842 - - - - - 0.840 - -
31. sypb ENSDARG00000002230 262 1.682 0.883 - - - - - 0.799 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
32. syt11a ENSDARG00000057913 1145 1.682 0.887 - - - - - 0.795 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
33. GADD45G GADD45G 382 1.68 0.853 - - - - 0.827 - - -
34. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.677 0.949 - - - - - 0.728 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
35. b3gat2 ENSDARG00000030733 348 1.675 0.766 - - - - - 0.909 - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
36. scn2b ENSDARG00000101713 796 1.661 0.909 - - - - - 0.752 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
37. CABZ01065506.1 CABZ01065506.1 204 1.659 0.779 - - - - - 0.880 - -
38. her8.2 ENSDARG00000069675 315 1.656 0.909 - - - - 0.747 - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
39. calb1 ENSDARG00000031598 252 1.654 0.947 - - - - - 0.707 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
40. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.649 0.804 - - - - - 0.845 - -
41. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.648 0.931 - - - - 0.717 - - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
42. si:ch211-247j9.1 ENSDARG00000079283 217 1.648 - - - - - 0.877 0.771 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
43. olfm1b ENSDARG00000014053 1392 1.648 0.833 - - - - - 0.815 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
44. slc1a2b ENSDARG00000102453 3136 1.643 0.830 - - - - - 0.813 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
45. BX571949.1 BX571949.1 293 1.641 0.937 - - - - - 0.704 - -
46. stx1b ENSDARG00000000503 2724 1.638 0.860 - - - - - 0.778 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
47. ndrg4 ENSDARG00000103937 1234 1.638 0.905 - - - - - 0.733 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
48. gsx1 ENSDARG00000035735 1243 1.638 0.834 - - - - - 0.804 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
49. pax6b ENSDARG00000045936 349 1.637 - - - - - 0.781 0.856 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
50. stmn2b ENSDARG00000070537 1586 1.637 0.865 - - - - - 0.772 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
51. gnao1a ENSDARG00000016676 8184 1.637 0.835 - - - - - 0.802 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
52. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.636 0.910 - - - - 0.726 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
53. CR524483.1 ENSDARG00000109248 86 1.631 0.779 - - - - - 0.852 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
54. eno2 ENSDARG00000014287 2162 1.628 0.878 - - - - - 0.750 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
55. nefmb ENSDARG00000043697 2052 1.626 0.895 - - - - 0.731 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
56. cplx2l ENSDARG00000018997 3975 1.624 0.845 - - - - - 0.779 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
57. scg2b ENSDARG00000038574 345 1.623 0.886 - - - - - 0.737 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
58. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.62 0.871 - - - - - 0.749 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
59. pcdh2ac ENSDARG00000099783 325 1.62 - - - - - 0.890 0.730 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
60. nefla ENSDARG00000057568 62 1.618 - - - - - 0.812 0.806 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
61. gpr186 ENSDARG00000094860 53 1.617 - - - - - 0.828 0.789 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
62. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.613 0.894 - - - - - 0.719 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
63. pcsk1nl ENSDARG00000076170 1232 1.61 0.889 - - - - - 0.721 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
64. PPFIA3 ENSDARG00000077053 310 1.606 0.854 - - - - - 0.752 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
65. LMTK3 LMTK3 222 1.604 - - - - - 0.715 0.889 - -
66. stmn2a ENSDARG00000033234 2272 1.604 0.855 - - - - - 0.749 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
67. TUBB8P7_1 TUBB8P7_1 2722 1.603 0.892 - - - - - 0.711 - -
68. syt9a ENSDARG00000003994 298 1.602 0.827 - - - - - 0.775 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
69. cdh7 582 1.602 - - - - - 0.824 0.778 - - cadherin 7, type 2, transcript variant X1
70. SV2A ENSDARG00000059945 1278 1.6 0.831 - - - - - 0.769 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
71. tmem229b ENSDARG00000060569 516 1.599 0.868 - - - - - 0.731 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
72. SPOCK1 ENSDARG00000074644 794 1.598 0.820 - - - - - 0.778 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
73. snap25b ENSDARG00000058117 469 1.598 0.784 - - - - - 0.814 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
74. nrn1a ENSDARG00000071860 1311 1.595 0.809 - - - - - 0.786 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
75. dbx2 2971 1.595 0.828 - - - - - 0.767 - - developing brain homeobox 2
76. prrt1 ENSDARG00000062208 368 1.594 0.831 - - - - - 0.763 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
77. ENSDARG00000086878 ENSDARG00000086878 332 1.592 0.768 - - - - - 0.824 - -
78. KCNAB2 KCNAB2 129 1.592 0.882 - - - - - 0.710 - -
79. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 1.59 0.783 - - - - - 0.807 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
80. chrna2b ENSDARG00000057025 217 1.587 - - - - - 0.760 0.827 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
81. nadl1.1 1200 1.586 0.849 - - - - - 0.737 - - neural adhesion molecule L1.1, transcript variant X1
82. BX470131.1 BX470131.1 86 1.585 0.779 - - - - - 0.806 - -
83. sh3gl2 sh3gl2 1305 1.584 0.806 - - - - - 0.778 - -
84. si:ch211-138k19.2 si:ch211-138k19.2 398 1.584 0.853 - - - - - 0.731 - -
85. tmie ENSDARG00000069423 305 1.581 - - - - - 0.758 0.823 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
86. mb21d2a mb21d2a 421 1.581 - - - - - 0.756 0.825 - -
87. im:7162084 im:7162084 665 1.581 - - - - - 0.768 0.813 - -
88. fam43b ENSDARG00000070222 92 1.58 - - - - - 0.845 0.735 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
89. INA INA 950 1.579 0.802 - - - - - 0.777 - -
90. fam219ab ENSDARG00000013813 591 1.577 - - - - - 0.708 0.869 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
91. nacad ENSDARG00000012347 1268 1.577 0.782 - - - - - 0.795 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
92. cadm3 ENSDARG00000057013 1545 1.576 0.802 - - - - - 0.774 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
93. si:ch211-152f6.6 si:ch211-152f6.6 278 1.575 0.791 - - - - - 0.784 - -
94. lgi2a ENSDARG00000111069 965 1.574 0.860 - - - - 0.714 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
95. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.572 0.815 - - - - 0.757 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
96. sox21b ENSDARG00000008540 1460 1.568 0.758 - - - - - 0.810 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
97. si:ch211-216b21.2 ENSDARG00000060253 54 1.567 0.779 - - - - - 0.788 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
98. C8H9orf172 C8H9orf172 113 1.567 0.779 - - - - - 0.788 - -
99. pou3f2a ENSDARG00000070220 817 1.566 - - - - - 0.779 0.787 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
100. tubb5 ENSDARG00000037997 18691 1.566 0.827 - - - - - 0.739 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]

There are 1096 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA