Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cacna1c

Gene Name Gene ID Reads Annotation
cacna1c ENSDARG00000008398 193 calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]










Genes with expression patterns similar to cacna1c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cacna1c ENSDARG00000008398 193 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
2. rltpr 258 2.405 - 0.761 - - - 0.824 0.820 - - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
3. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1.944 - 1.000 - - - 0.944 - - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
4. DLK1 60 1.94 - 1.000 - - - 0.940 - - - delta like non-canonical Notch ligand 1
5. kcnn1a ENSDARG00000091306 95 1.918 - 1.000 - - - 0.918 - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
6. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.912 - 1.000 - - - - 0.912 - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
7. si:ch73-362m14.4 ENSDARG00000023940 88 1.867 - - - - - 0.940 0.927 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
8. CD81 CD81 67 1.854 - - - - - 0.911 0.943 - -
9. elovl2 ENSDARG00000045414 119 1.805 - 0.912 - - - - 0.893 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
10. si:dkey-220k22.3 ENSDARG00000094693 166 1.804 - 1.000 - - - 0.804 - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
11. si:dkey-81p22.11 ENSDARG00000093797 68 1.802 - - - - - 0.903 0.899 - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
12. si:dkey-79f11.1 si:dkey-79f11.1 91 1.797 - 1.000 - - - 0.797 - - -
13. DHX32 DHX32 181 1.793 - 1.000 - - - - 0.793 - -
14. MSH4 ENSDARG00000075826 37 1.774 - 1.000 - - - - - 0.774 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
15. CABZ01088365.1 CABZ01088365.1 66 1.772 - 1.000 - - - - - 0.772 -
16. lrrn3 lrrn3 137 1.77 - 1.000 - - - 0.770 - - -
17. si:dkey-264b2.3 19 1.77 - - - - - 0.877 0.893 - - si:dkey-264b2.3, transcript variant X2
18. npffr2.1 npffr2.1 60 1.754 - 1.000 - - - 0.754 - - -
19. si:ch211-268b13.3 si:ch211-268b13.3 28 1.749 - 1.000 - - - - 0.749 - -
20. si:dkeyp-79c2.1 42 1.715 - - - - - 0.815 0.900 - - si:dkeyp-79c2.1, transcript variant X2
21. crmp1 ENSDARG00000056742 332 1.712 - - - - - 0.835 0.877 - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
22. FP102801.1_1 FP102801.1_1 238 1.708 - - - - - 0.942 - 0.766 -
23. nadl1.2 695 1.702 - - - - - 0.893 0.809 - - neural adhesion molecule L1.2, transcript variant X1
24. gpr155b ENSDARG00000071086 54 1.702 - 0.806 - - - 0.896 - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
25. ppp2r2ba 321 1.693 - - - - - 0.961 0.732 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
26. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.686 - - - - - 0.918 0.768 - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
27. BX649494.1 BX649494.1 195 1.683 - - - - - 0.923 0.760 - -
28. atcaya ENSDARG00000071678 344 1.683 - - - - - 0.963 - - 0.720 ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
29. ADCYAP1R1 ADCYAP1R1 118 1.674 - - - - - 0.909 - 0.765 -
30. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 1.667 - 0.729 - - - 0.938 - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
31. cbln1 ENSDARG00000057296 165 1.661 - 0.721 - - - 0.940 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
32. apof ENSDARG00000090980 145 1.659 - - - - - 0.734 0.925 - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
33. ROBO3_1 ROBO3_1 468 1.644 - - - - - 0.887 - 0.757 -
34. grik4 ENSDARG00000026753 22 1.64 - - - - 0.703 0.937 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
35. ek1 ENSDARG00000020080 742 1.636 - 0.738 - - - 0.898 - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
36. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1.633 - 0.721 - - - - 0.912 - - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
37. lrrc4.2 ENSDARG00000003020 235 1.629 - - - - - 0.820 0.809 - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
38. C9H2orf69 C9H2orf69 148 1.624 - - - - - 0.866 - 0.758 -
39. ITFG1 ENSDARG00000075584, ENSDARG00000110264 615 1.618 - - - - - 0.906 - - 0.712 integrin alpha FG-GAP repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-121003-3]
40. necap1 ENSDARG00000020798 612 1.614 - - - - - 0.777 - 0.837 - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
41. MYO5C ENSDARG00000104235 1285 1.587 - - - - - 0.722 0.865 - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
42. npffr1l2 ENSDARG00000062631 127 1.576 - - - - - 0.834 0.742 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
43. tspan5a ENSDARG00000086033 1865 1.574 - - - - - 0.753 - 0.821 - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
44. slc32a1 ENSDARG00000059775 1092 1.573 - - - - - 0.758 - 0.815 - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
45. lingo3a ENSDARG00000061970 234 1.571 - 0.820 - - - 0.751 - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
46. actr5 ENSDARG00000098235 237 1.569 - 0.721 - - - 0.848 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
47. nrn1a ENSDARG00000071860 1311 1.552 - - - - - 0.809 - 0.743 - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
48. tubgcp2 ENSDARG00000013079 1520 1.55 - - - - - 0.801 - - 0.749 tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
49. dnm1b ENSDARG00000009281 219 1.541 - 0.831 - - - - 0.710 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
50. ODF3L2 40 1.534 - - - - 0.715 0.819 - - - outer dense fiber of sperm tails 3-like 2
51. rgs20 ENSDARG00000038859 331 1.53 - - - - - 0.804 - 0.726 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
52. si:dkey-92j12.6 211 1.523 - 0.747 - - - - 0.776 - - si:dkey-92j12.6
53. ZCCHC2 ENSDARG00000067950 204 1.514 - - - - - 0.807 0.707 - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
54. OTOF OTOF 195 1.514 - - - - - 0.729 0.785 - -
55. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.49 - - - - - 0.754 - 0.736 - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
56. tmem53 ENSDARG00000038789 411 1.47 - 0.743 - - - - - - 0.727 transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
57. CR354432.1 CR354432.1 424 1.466 - - - - - - 0.750 0.716 -
58. nrxn3b ENSDARG00000062693 192 1.461 - 0.721 - - - 0.740 - - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
59. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.46 - - - - - 0.743 - 0.717 - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
60. si:dkey-33o22.1 ENSDARG00000087639 21 1.451 - 0.729 - - 0.722 - - - - si:dkey-33o22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-221]
61. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.441 - - - - - 0.737 - 0.704 - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
62. CR678040.1 CR678040.1 117 1.432 - 0.721 - - 0.711 - - - -
63. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.422 - - - - - 0.713 0.709 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
64. skilb ENSDARG00000022904 300 1.414 - - - - - 0.707 - 0.707 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
65. si:ch211-186e20.2 ENSDARG00000074712 0 1 - 1.000 - - - - - - - si:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
66. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
67. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
68. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - 1.000 - - - - - - -
69. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1 - 1.000 - - - - - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
70. adcyap1a ENSDARG00000004015 67 1 - 1.000 - - - - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
71. ERICH1 18 1 - 1.000 - - - - - - - glutamate rich 1
72. si:dkey-188k17.2 7 1 - 1.000 - - - - - - - si:dkey-188k17.2
73. slc2a5 ENSDARG00000077875 5 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
74. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1 - 1.000 - - - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
75. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
76. mpz ENSDARG00000038609 1740 1 - 1.000 - - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
77. C12H17orf70 C12H17orf70 25 1 - 1.000 - - - - - - -
78. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
79. gaa ENSDARG00000090714 19 1 - 1.000 - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
80. PEG3_19 PEG3_19 29 1 - 1.000 - - - - - - -
81. SYNDIG1 ENSDARG00000100751 165 1 - 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
82. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
83. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1 - 1.000 - - - - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
84. tsen54 ENSDARG00000036844 11 1 - 1.000 - - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
85. C17H2orf71 C17H2orf71 0 1 - 1.000 - - - - - - -
86. elfn1b ENSDARG00000074372 25 1 - 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
87. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 - 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
88. ROCK2_1 ROCK2_1 47 1 - 1.000 - - - - - - -
89. sebox ENSDARG00000042526 2 1 - 1.000 - - - - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
90. C8H1orf173 C8H1orf173 10 1 - 1.000 - - - - - - -
91. BX248582.3 BX248582.3 3 1 - 1.000 - - - - - - -
92. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
93. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
94. prph2a ENSDARG00000038018 2 1 - 1.000 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
95. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
96. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
97. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
98. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
99. TNS3_1 TNS3_1 8 1 - 1.000 - - - - - - -
100. gabpb1 ENSDARG00000023659 26 1 - 1.000 - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]

There are 1873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA