Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cacna1ba

Gene Name Gene ID Reads Annotation
cacna1ba ENSDARG00000021735 870 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]










Genes with expression patterns similar to cacna1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cacna1ba ENSDARG00000021735 870 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
2. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 2.497 - - - - - 0.756 0.991 - 0.750 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
3. FBLIM1 ENSDARG00000071558 1793 2.394 0.789 0.790 - - - - - 0.815 - filamin binding LIM protein 1 [Source:ZFIN;Acc:ZDB-GENE-061013-662]
4. ncoa6 ENSDARG00000071272 759 1.912 - - - - - - 0.993 - 0.919 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
5. insm1b ENSDARG00000053301 2032 1.905 - - - - - 0.940 0.965 - - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
6. ncam2 ENSDARG00000017466 175 1.875 - - - - - 0.939 - - 0.936 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
7. slc24a4a ENSDARG00000015425 1464 1.846 - - - - - - 0.985 0.861 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
8. TUBB8P7_2 TUBB8P7_2 565 1.829 - - - - - 0.898 - - 0.931
9. tmem59l ENSDARG00000003655 1536 1.818 - - - - - 0.909 - - 0.909 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
10. cnot3a ENSDARG00000007135 3084 1.798 - - - - - - 0.990 - 0.808 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
11. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.786 - - - - - - 0.988 - 0.798 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
12. TRIM67 ENSDARG00000108787 290 1.781 - - - - - 0.917 - 0.864 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
13. ARHGAP22 ENSDARG00000076434 1406 1.777 - - - - - 0.794 0.983 - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
14. ZNF518B 475 1.762 - - - - - - - 0.830 0.932 zinc finger protein 518B
15. tmem115 ENSDARG00000055763 1824 1.757 - 0.781 - - - - 0.976 - - transmembrane protein 115 [Source:ZFIN;Acc:ZDB-GENE-050913-157]
16. scrt1a ENSDARG00000100821 2687 1.753 - - - - - 0.764 0.989 - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
17. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.753 - 0.806 - - - - 0.947 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
18. osr1 ENSDARG00000014091 770 1.743 - 0.754 - - - - 0.989 - - odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]
19. nefma ENSDARG00000021351 790 1.739 - - - - - 0.749 0.990 - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
20. lect2l ENSDARG00000033227 482 1.733 - - - - - - 0.971 0.762 - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
21. kif5c ENSDARG00000076027 424 1.727 - - - - - 0.812 - - 0.915 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
22. GRB10 GRB10 1496 1.726 - 0.739 - - - - 0.987 - -
23. CABZ01078431.1 CABZ01078431.1 183 1.725 - - - - - 0.732 0.993 - -
24. flrt1a 107 1.724 - - - - - 0.791 - - 0.933 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
25. fkbp8 ENSDARG00000001734 1709 1.713 - 0.721 - - - - 0.992 - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
26. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.71 - 0.776 - - - - 0.934 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
27. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 1.709 - 0.714 - - - - 0.995 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
28. nup98 ENSDARG00000074955 3998 1.707 - 0.711 - - - - 0.996 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
29. pou2f2b pou2f2b 134 1.702 - - - - - 0.842 - 0.860 -
30. rusc1 ENSDARG00000078125 617 1.7 - - - - - 0.797 - - 0.903 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
31. rab39b rab39b 449 1.694 - - - - - 0.788 - - 0.906
32. loxl2a ENSDARG00000044010 1906 1.674 - - - - - - - 0.804 0.870 lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
33. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.671 - - - - - 0.742 - - 0.929 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
34. zgc:77439 ENSDARG00000039211 1492 1.663 - 0.757 - - - - 0.906 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
35. rheb ENSDARG00000090213 1432 1.659 - - - - - 0.928 - - 0.731 Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
36. umps ENSDARG00000012215 4564 1.659 - 0.731 - - - - - - 0.928 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
37. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.656 0.720 - - - - - - - 0.936 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
38. abca1a ENSDARG00000074635 1085 1.655 - 0.799 - - - - - - 0.856 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
39. tac1 ENSDARG00000014490 781 1.653 - - - - - 0.711 0.942 - - tachykinin 1 [Source:ZFIN;Acc:ZDB-GENE-060503-904]
40. gdi1 ENSDARG00000056122 4106 1.647 - - - - - 0.797 - - 0.850 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
41. ccdc6b ENSDARG00000017595 828 1.644 - 0.721 - - - 0.923 - - - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
42. nploc4 ENSDARG00000100487 1262 1.638 - - - - - - - 0.751 0.887 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
43. rbfox3 rbfox3 1443 1.637 - - - - - 0.788 - - 0.849
44. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.635 - - - - - 0.727 - - 0.908 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
45. prr12a ENSDARG00000074229 1668 1.634 - - - - - 0.810 - - 0.824 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
46. wu:fj29h11 ENSDARG00000096562 863 1.62 0.707 - - - - - - - 0.913 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
47. tm9sf4 ENSDARG00000002536 1684 1.619 - 0.766 - - - - - - 0.853 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
48. vamp1 ENSDARG00000031283 3094 1.611 - - - - - 0.845 - 0.766 - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
49. gstp1 ENSDARG00000104068 12698 1.609 - 0.779 - - - - 0.830 - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
50. CHL1 CHL1 1553 1.604 - - - - - 0.808 - - 0.796
51. fam102bb ENSDARG00000002333 1483 1.599 - - - - - 0.740 - - 0.859 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
52. calca ENSDARG00000056590 150 1.599 - - - - - 0.758 - 0.841 - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
53. tox3 ENSDARG00000073957 3075 1.586 - - - - - 0.811 - - 0.775 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
54. zgc:113336 ENSDARG00000104078 147 1.58 - - - - - 0.716 - 0.864 - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
55. mogs ENSDARG00000060252 1151 1.577 - 0.773 - - - - - 0.804 - mannosyl-oligosaccharide glucosidase [Source:ZFIN;Acc:ZDB-GENE-070112-412]
56. parvaa ENSDARG00000043710 3495 1.577 - 0.750 - - - - 0.827 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
57. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.576 - - - - - 0.776 - - 0.800 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
58. dvl3a ENSDARG00000015707 1132 1.562 0.709 - - - - - - - 0.853 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
59. AKT3 AKT3 1729 1.556 - - - - - 0.763 - - 0.793
60. tmem248 ENSDARG00000018825 1560 1.555 - - - - - - - 0.746 0.809 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
61. uchl1 ENSDARG00000026871 1578 1.552 - - - - - 0.734 - - 0.818 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
62. acss1 ENSDARG00000044142, ENSDARG00000109700 516 1.546 0.728 - - - - - - 0.818 - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
63. scn8aa ENSDARG00000005775 792 1.54 - - - - - 0.785 - 0.755 - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
64. TMEM132E ENSDARG00000090830 1197 1.538 - - - - - 0.780 - 0.758 - transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
65. dock7 ENSDARG00000078675 1995 1.534 - - - - - 0.725 - - 0.809 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
66. irx1b ENSDARG00000056594 2224 1.533 - - - - - 0.822 - - 0.711 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
67. CR548630.1 CR548630.1 3301 1.525 0.736 - - - - 0.789 - - -
68. tnk1 ENSDARG00000069433 639 1.525 - 0.735 - - - - - 0.790 - tyrosine kinase, non-receptor, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7427]
69. ank2b ENSDARG00000043313 3065 1.517 - - - - - 0.717 - - 0.800 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
70. zgc:85975 4738 1.512 - 0.727 - - - - 0.785 - - zgc:85975
71. WDR1 ENSDARG00000114022 7532 1.508 - - - - - - 0.806 - 0.702 WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
72. gdf11 ENSDARG00000044924 534 1.506 - - - - - 0.778 - 0.728 - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
73. ptprsb 1085 1.5 - - - - - 0.746 - - 0.754 protein tyrosine phosphatase, receptor type, s, b
74. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.476 - 0.774 - - - 0.702 - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
75. SH3BGRL ENSDARG00000058302 4525 1.452 - 0.730 - - - - - - 0.722 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
76. slc1a2b ENSDARG00000102453 3136 1.419 - - - - - 0.718 - - 0.701 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
77. cap1 ENSDARG00000016350 891 0.997 - - - - - - 0.997 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
78. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.997 - - - - - - 0.997 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
79. NBR1 NBR1 752 0.996 - - - - - - 0.996 - -
80. ppm1ab ENSDARG00000043250 772 0.995 - - - - - - 0.995 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
81. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 0.995 - - - - - - 0.995 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
82. pam ENSDARG00000100170 2442 0.995 - - - - - - 0.995 - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
83. si:ch73-18b11.1 si:ch73-18b11.1 3840 0.995 - - - - - - 0.995 - -
84. hiat1a ENSDARG00000013117 607 0.995 - - - - - - 0.995 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
85. trappc3 ENSDARG00000045364 1021 0.995 - - - - - - 0.995 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
86. tmem104 ENSDARG00000088560 859 0.995 - - - - - - 0.995 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
87. timeless ENSDARG00000078497 1114 0.995 - - - - - - 0.995 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
88. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.994 - - - - - - 0.994 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
89. IGSF8 ENSDARG00000038467 2102 0.994 - - - - - - 0.994 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
90. thbs4a ENSDARG00000102777 625 0.994 - - - - - - 0.994 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
91. pdcd10b ENSDARG00000012591 3395 0.994 - - - - - - 0.994 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
92. acad11 ENSDARG00000045411 350 0.994 - - - - - - 0.994 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
93. rrp7a ENSDARG00000098934 1123 0.994 - - - - - - 0.994 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
94. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.994 - - - - - - 0.994 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
95. calub ENSDARG00000005115 1478 0.994 - - - - - - 0.994 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
96. TPGS1 TPGS1 228 0.994 - - - - - - 0.994 - -
97. crb3b ENSDARG00000068182 683 0.994 - - - - - - 0.994 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
98. gnpat ENSDARG00000074401 479 0.994 - - - - - - 0.994 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
99. CU019646.2 CU019646.2 519 0.994 - - - - - - 0.994 - -
100. cdon ENSDARG00000061328 1441 0.994 - - - - - - 0.994 - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]

There are 1836 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA