Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cacna1ab

Gene Name Gene ID Reads Annotation
cacna1ab ENSDARG00000006923 12 calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]










Genes with expression patterns similar to cacna1ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cacna1ab ENSDARG00000006923 12 6 - 1.000 1.000 - 1.000 - 1.000 1.000 1.000 calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
2. tmem91 ENSDARG00000068456 81 1.943 - 1.000 - - - - 0.943 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
3. KCNAB2 KCNAB2 129 1.913 - 1.000 - - - - 0.913 - -
4. GJD2_1 GJD2_1 3045 1.9 - 1.000 - - - - 0.900 - -
5. CHRNB4 ENSDARG00000101677 128 1.889 - 0.946 - - - - 0.943 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
6. si:ch211-152f6.6 si:ch211-152f6.6 278 1.831 - 0.946 - - - - 0.885 - -
7. slc17a6a ENSDARG00000001127 337 1.826 - 1.000 - - - - 0.826 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
8. slc17a6b ENSDARG00000041150 823 1.805 - 1.000 - - - - 0.805 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
9. calb1 ENSDARG00000031598 252 1.783 - 1.000 - - - - 0.783 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
10. htr3a ENSDARG00000089212 51 1.783 - 1.000 - - 0.783 - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
11. zeb2b ENSDARG00000078416 23 1.766 - 1.000 - - - - 0.766 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
12. zgc:110434 21 1.766 - 1.000 - - - - 0.766 - - zgc:110434
13. kif17 ENSDARG00000055238 12 1.766 - 1.000 - - - - 0.766 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
14. CLDN20 26 1.766 - 1.000 - - - - 0.766 - - claudin 20, transcript variant X2
15. cdk20 ENSDARG00000003867 27 1.766 - 1.000 - - - - 0.766 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
16. SCAMP5 SCAMP5 19 1.766 - 1.000 - - - - 0.766 - -
17. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1.766 - 1.000 - - - - 0.766 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
18. tap1 ENSDARG00000079766 75 1.756 - 1.000 - - 0.756 - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
19. CU914780.1 ENSDARG00000114023 105 1.754 - 1.000 - - - - 0.754 - -
20. rbfox3l rbfox3l 34 1.747 - 1.000 - - 0.747 - - - -
21. sox12 ENSDARG00000025847 681 1.73 - 1.000 - - - - 0.730 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
22. NTRK3 NTRK3 163 1.728 - 1.000 - - - - 0.728 - -
23. fam219ab ENSDARG00000013813 591 1.724 - 1.000 - - - - 0.724 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
24. klf5b ENSDARG00000062106 7 1.724 - 1.000 - - 0.724 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
25. RNF214_1 RNF214_1 5 1.722 - 1.000 0.722 - - - - - -
26. cyp46a4 cyp46a4 5 1.712 - 1.000 0.712 - - - - - -
27. mir184 48 1.706 - 1.000 - - - - - - 0.706 microRNA 184
28. gucy1b3 92 1.706 - 1.000 - - - - 0.706 - - guanylate cyclase 1, soluble, beta 3
29. scrt2 ENSDARG00000056175 4331 1.702 - 0.895 - - - - 0.807 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
30. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.7 - 1.000 - - - - 0.700 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
31. amph ENSDARG00000007663 599 1.692 - 0.909 - - - - 0.783 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
32. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.652 - 0.788 - - - - 0.864 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
33. pcdh2ac ENSDARG00000099783 325 1.64 - 0.710 - - - - 0.930 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
34. slc1a2b ENSDARG00000102453 3136 1.629 - 0.829 - - - - 0.800 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
35. rbfox3 rbfox3 1443 1.622 - 0.833 - - - - 0.789 - -
36. EPB41L2 ENSDARG00000093374 7 1.604 - - 0.868 - 0.736 - - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
37. scn8aa ENSDARG00000005775 792 1.601 - 0.754 - - - - 0.847 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
38. syngr3a ENSDARG00000014871 405 1.597 - 0.806 - - - - 0.791 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
39. CHL1 CHL1 1553 1.584 - 0.723 - - - - 0.861 - -
40. stxbp5a ENSDARG00000002656 318 1.582 - 0.733 - - - - 0.849 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
41. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.578 - 0.783 - - - - 0.795 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
42. TOP1 ENSDARG00000086775 48 1.541 - 0.758 - - 0.783 - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
43. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.54 - 0.777 - - - - 0.763 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
44. stx1b ENSDARG00000000503 2724 1.517 - 0.814 - - - - 0.703 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
45. GLRA3 ENSDARG00000011066 242 1.516 - 0.814 - - - - 0.702 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
46. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.486 - 0.763 - - - - 0.723 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
47. si:ch211-113a14.26_4 31 1.474 - - - - - - 0.766 0.708 - si:ch211-113a14.26
48. zgc:101731 ENSDARG00000040965 27 1.474 - - - - 0.708 - 0.766 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
49. TUSC5 TUSC5 1436 1.463 - 0.701 - - - - 0.762 - -
50. jag1a ENSDARG00000030289 1275 1.45 - 0.736 - - - - 0.714 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
51. nova2 ENSDARG00000017673 7685 1.434 - 0.708 - - - - 0.726 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
52. csf1b ENSDARG00000068263 248 1.424 - 0.714 - - - - 0.710 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
53. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
54. si:ch211-215m21.17 si:ch211-215m21.17 14 1 - 1.000 - - - - - - -
55. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
56. C14HXorf65 C14HXorf65 49 1 - 1.000 - - - - - - -
57. BX324210.1 BX324210.1 0 1 - 1.000 - - - - - - -
58. mpp2a ENSDARG00000053453 68 1 - - - - - - 1.000 - - membrane protein, palmitoylated 2a (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-071004-82]
59. si:dkey-202n8.1 si:dkey-202n8.1 35 1 - - - - - - 1.000 - -
60. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 - 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
61. TMEM98 ENSDARG00000059743 214 1 - 1.000 - - - - - - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
62. tbx5b ENSDARG00000092060 37 1 - 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
63. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
64. prdm14 ENSDARG00000045371 106 1 - 1.000 - - - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
65. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
66. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
67. COX5B ENSDARG00000015978 70 1 - - - - - - 1.000 - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
68. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
69. CR387932.1 ENSDARG00000097344 2 1 - 1.000 - - - - - - -
70. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
71. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
72. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
73. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
74. XRCC2 ENSDARG00000013933 15 1 - 1.000 - - - - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
75. SNORA14 SNORA14 10 1 - 1.000 - - - - - - -
76. hspb15 ENSDARG00000078411 6 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
77. khdrbs2 ENSDARG00000069469 160 1 - 1.000 - - - - - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
78. xkr8.2 ENSDARG00000076820 51 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
79. FAM184A ENSDARG00000014081 34 1 - 1.000 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
80. GMEB2 ENSDARG00000093240 6 1 - 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
81. TUBB2A TUBB2A 142 1 - 1.000 - - - - - - -
82. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
83. CU695006.1 CU695006.1 4 1 - 1.000 - - - - - - -
84. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
85. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - 1.000 - - - - - - -
86. cnga3b ENSDARG00000012297 2 1 - 1.000 - - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
87. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
88. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
89. si:ch211-122l24.4 si:ch211-122l24.4 41 1 - 1.000 - - - - - - -
90. KCNS3 KCNS3 82 1 - 1.000 - - - - - - -
91. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
92. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
93. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
94. BX119910.13 BX119910.13 4 1 - 1.000 - - - - - - -
95. cyp17a2 ENSDARG00000053966 1 1 - 1.000 - - - - - - - cytochrome P450, family 17, subfamily A, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-100822-1]
96. CT573433.2 CT573433.2 115 1 - 1.000 - - - - - - -
97. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
98. INTU ENSDARG00000077639 158 1 - 1.000 - - - - - - - inturned planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-110914-91]
99. DKK3 DKK3 12 1 - 1.000 - - - - - - -
100. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -

There are 1007 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA