Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ca9

Gene Name Gene ID Reads Annotation
ca9 ENSDARG00000102300 193 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]










Genes with expression patterns similar to ca9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ca9 ENSDARG00000102300 193 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
2. aqp8b_1 ENSDARG00000089749 586 3.151 - - - 0.794 - 0.709 0.786 - 0.862 aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
3. cdx1b ENSDARG00000116139 113 2.408 - - - - - - 0.823 0.813 0.772 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
4. TMEM98 ENSDARG00000059743 214 1.942 0.993 - - - - - 0.949 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
5. si:ch211-253p2.2 ENSDARG00000071772 64 1.874 0.931 0.943 - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
6. BX119916.1 BX119916.1 19 1.87 - 0.965 - - - - 0.905 - -
7. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 1.815 0.970 - - - - - 0.845 - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
8. slc6a6a ENSDARG00000012534 183 1.791 0.893 - - - - - 0.898 - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
9. stx8 ENSDARG00000103173 180 1.784 0.989 0.795 - - - - - - - syntaxin 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1360]
10. zgc:174700 zgc:174700 35 1.778 0.912 - - - - - 0.866 - -
11. elf3 ENSDARG00000077982 211 1.776 - 0.857 - - - - 0.919 - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
12. CR932358.2 CR932358.2 15 1.774 - 0.895 - - - - 0.879 - -
13. ZP2_2 ZP2_2 28 1.764 0.978 - - - - - 0.786 - -
14. strumpellin 212 1.757 0.961 0.796 - - - - - - - strumpellin
15. ZNF135_5 ZNF135_5 73 1.725 - 0.890 - - - - 0.835 - -
16. CU104716.2 CU104716.2 10 1.712 0.978 0.734 - - - - - - -
17. si:ch211-224l10.4 ENSDARG00000088762 36 1.698 0.983 - - - - - 0.715 - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
18. ZACN ZACN 502 1.685 - 0.933 - 0.752 - - - - -
19. slc23a1 ENSDARG00000015033 40 1.665 0.741 - - - - - 0.924 - - solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
20. arl6 ENSDARG00000032056, ENSDARG00000113281 238 1.663 0.760 - - - - - 0.903 - - ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
21. zdhhc16b ENSDARG00000015989 193 1.66 - 0.925 - - - - 0.735 - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
22. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1.657 - 0.828 - - - - 0.829 - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
23. srd5a3 ENSDARG00000043307 142 1.653 0.952 - - - - - 0.701 - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
24. mal 906 1.644 - 0.864 - - - - 0.780 - - mal, T-cell differentiation protein
25. slc27a6 ENSDARG00000046053 57 1.642 0.914 0.728 - - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
26. eps8l3 eps8l3 144 1.641 - 0.815 - - - - 0.826 - -
27. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 1.64 - - - - - 0.761 0.879 - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
28. rft1 ENSDARG00000060398 146 1.629 - 0.836 - - - - 0.793 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
29. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.601 - 0.861 - - - - 0.740 - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
30. hook1 ENSDARG00000042946 452 1.581 - 0.732 - - - - 0.849 - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
31. itpk1 itpk1 425 1.56 0.723 0.837 - - - - - - -
32. emx1 ENSDARG00000039569 787 1.559 - 0.828 - - - - 0.731 - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
33. zgc:91985 zgc:91985 1517 1.552 0.792 0.760 - - - - - - -
34. slc4a4a ENSDARG00000013730 1441 1.537 - - - - - - 0.726 0.811 - solute carrier family 4 (sodium bicarbonate cotransporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060526-274]
35. sigirr ENSDARG00000062204 52 1.53 - - - - - 0.746 0.784 - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
36. nt5c1bb ENSDARG00000033742 1248 1.53 0.761 0.769 - - - - - - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
37. si:dkey-39a18.1 ENSDARG00000045669 599 1.517 - 0.777 - - - - 0.740 - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
38. FRRS1_1 FRRS1_1 831 1.514 0.814 - - - - - 0.700 - -
39. BX890577.1 BX890577.1 257 1.508 - 0.736 - - - - 0.772 - -
40. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.507 - 0.713 - - - - 0.794 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
41. CU683898.1 CU683898.1 203 1.501 - 0.757 - - - - 0.744 - -
42. CR848664.3 CR848664.3 183 1.5 0.772 - - - - - 0.728 - -
43. bmp7a ENSDARG00000018260 92 1.5 0.742 - - - - - 0.758 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
44. oip5 ENSDARG00000093597 329 1.491 - 0.717 - - - - 0.774 - - opa interacting protein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-328]
45. atp1a1a.3 ENSDARG00000039131 3267 1.479 - 0.770 - - - - 0.709 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
46. ppa1a ENSDARG00000099933 31 1.477 - 0.734 - - 0.743 - - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
47. ppp1r3da ENSDARG00000077513 109 1.475 - - - - - 0.773 0.702 - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
48. als2a ENSDARG00000075111 29 1.469 - 0.747 - - - - 0.722 - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
49. TMEM27 TMEM27 261 1.461 - - - 0.708 - - - - 0.753
50. AL954698.1 ENSDARG00000098202 377 1.448 - 0.747 - - - - 0.701 - -
51. acsl5 ENSDARG00000075931 880 1.445 - - - - - - - 0.723 0.722 acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
52. SLC6A7 ENSDARG00000030006 304 1.427 0.726 0.701 - - - - - - - solute carrier family 6 member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-1492]
53. irgf3 ENSDARG00000062820 20 1 - 1.000 - - - - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
54. fybb ENSDARG00000044694 136 1 1.000 - - - - - - - - FYN binding protein b [Source:ZFIN;Acc:ZDB-GENE-091204-85]
55. cldn17 ENSDARG00000099950 14 1 1.000 - - - - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
56. mfsd4a mfsd4a 179 0.993 0.993 - - - - - - - -
57. mirlet7a-6 15 0.993 0.993 - - - - - - - - microRNA let7a-6
58. comtd1 ENSDARG00000078918 238 0.993 0.993 - - - - - - - - catechol-O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1072]
59. ctslb_1 ENSDARG00000039173, ENSDARG00000074306 486 0.993 0.993 - - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
60. myhb ENSDARG00000001993 11 0.993 0.993 - - - - - - - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
61. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 0.993 0.993 - - - - - - - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
62. ENSDARG00000039608 ENSDARG00000039608 23 0.993 0.993 - - - - - - - -
63. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.993 0.993 - - - - - - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
64. zgc:136791 97 0.993 0.993 - - - - - - - - zgc:136791, transcript variant X3
65. CR762484.3 CR762484.3 395 0.993 0.993 - - - - - - - -
66. CABZ01099881.1 CABZ01099881.1 4 0.993 0.993 - - - - - - - -
67. AC024175.9 AC024175.9 56 0.993 0.993 - - - - - - - -
68. EGR4_1 EGR4_1 14 0.993 0.993 - - - - - - - -
69. atad1a ENSDARG00000023267 155 0.987 0.987 - - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
70. si:dkey-231k6.4 si:dkey-231k6.4 72 0.987 0.987 - - - - - - - -
71. pot1 ENSDARG00000079915 42 0.987 0.987 - - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
72. OMA1 ENSDARG00000090503 19 0.985 0.985 - - - - - - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
73. TNFRSF14 TNFRSF14 330 0.985 0.985 - - - - - - - -
74. zgc:111868 ENSDARG00000099060 68 0.985 0.985 - - - - - - - - zgc:111868 [Source:ZFIN;Acc:ZDB-GENE-050809-138]
75. ENSDARG00000088164 ENSDARG00000088164 59 0.984 0.984 - - - - - - - -
76. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.984 0.984 - - - - - - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
77. si:dkey-20i10.7 ENSDARG00000075269 133 0.984 0.984 - - - - - - - - si:dkey-20i10.7 [Source:ZFIN;Acc:ZDB-GENE-090313-232]
78. si:rp71-17i16.6 ENSDARG00000095453 167 0.983 - - - - - - 0.983 - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
79. GPR119 GPR119 41 0.983 - - - - - - 0.983 - -
80. DUSP18 DUSP18 117 0.983 0.983 - - - - - - - -
81. si:ch211-222k6.3 ENSDARG00000071578 127 0.982 0.982 - - - - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
82. dhrs9 ENSDARG00000019260 250 0.982 0.982 - - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
83. fmnl2a ENSDARG00000012586 136 0.978 0.978 - - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
84. socs7_2 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 66 0.978 0.978 - - - - - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
85. lrmp ENSDARG00000045574 26 0.978 0.978 - - - - - - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
86. BX649494.1 BX649494.1 195 0.978 0.978 - - - - - - - -
87. BX470149.1 BX470149.1 235 0.977 0.977 - - - - - - - -
88. CU138503.3 CU138503.3 31 0.976 0.976 - - - - - - - -
89. si:dkey-286j17.3 si:dkey-286j17.3 8 0.974 0.974 - - - - - - - -
90. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 0.974 0.974 - - - - - - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
91. ssrp1b ENSDARG00000016994 58 0.974 0.974 - - - - - - - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
92. odf3b ENSDARG00000114397, ENSDARG00000116899 21 0.971 - - - - - - 0.971 - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
93. slc13a5 slc13a5 15 0.971 - - - - - - 0.971 - -
94. wdr54 ENSDARG00000010248 245 0.97 0.970 - - - - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
95. CR762484.2 CR762484.2 42 0.97 0.970 - - - - - - - -
96. BX511227.1 ENSDARG00000102499 111 0.969 0.969 - - - - - - - -
97. tmco4 ENSDARG00000078924 330 0.966 0.966 - - - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
98. TMEM116 TMEM116 96 0.964 0.964 - - - - - - - -
99. si:ch211-270n8.3 87 0.964 - - - - - - 0.964 - - si:ch211-270n8.3, transcript variant X2
100. rab25a ENSDARG00000058800 451 0.96 0.960 - - - - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]

There are 1142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA