Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ca2

Gene Name Gene ID Reads Annotation
ca2 ENSDARG00000014488 10141 carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]










Genes with expression patterns similar to ca2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ca2 ENSDARG00000014488 10141 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
2. si:ch211-226o13.2 84923 3.119 - - 0.840 0.783 0.790 - - - 0.706 si:ch211-226o13.2
3. tmod4 ENSDARG00000020890 17436 3.014 - - 0.845 0.723 0.740 - - - 0.706 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
4. atp2a1 ENSDARG00000020574 291561 2.341 - - 0.835 0.747 0.759 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
5. myoz1b ENSDARG00000071445 13381 2.323 - - 0.789 0.767 - 0.767 - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
6. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 2.315 - - 0.840 - 0.732 - - 0.743 - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
7. mylz3 ENSDARG00000017441 303597 2.312 - - 0.834 0.738 0.740 - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
8. SYNPO2L SYNPO2L 6697 2.265 - - 0.776 0.709 0.780 - - - -
9. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.197 - - 0.702 0.791 - - - - 0.704 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
10. prkab1b ENSDARG00000046143 8640 1.716 - 0.911 - - - - 0.805 - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
11. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 1.705 - - - - - 0.874 0.831 - - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
12. kcnj1a.5 ENSDARG00000089060 617 1.674 - - - - - 0.893 0.781 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-050420-120]
13. fam129ba ENSDARG00000062970 1578 1.657 - - - - - 0.901 0.756 - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
14. perp ENSDARG00000063572 6423 1.652 - - - - - 0.942 0.710 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
15. gclc ENSDARG00000013095 2146 1.643 - - - - - 0.884 0.759 - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
16. syne2b ENSDARG00000053484 9225 1.638 - - - - - 0.905 - 0.733 - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
17. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.636 - - 0.779 - - 0.857 - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
18. cebpb ENSDARG00000042725 3921 1.635 - - - - - 0.877 0.758 - - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
19. jph1b ENSDARG00000038826 7416 1.623 - - 0.747 - - 0.876 - - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
20. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.622 - 0.742 - - - 0.880 - - - erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
21. myl1 ENSDARG00000014196 98943 1.619 - - 0.856 - 0.763 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
22. COL22A1 COL22A1 4473 1.615 - - - - - 0.868 - - 0.747
23. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.615 - - 0.729 - - 0.886 - - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
24. gnai2a ENSDARG00000018174 6549 1.61 - - - - - 0.885 0.725 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8365]
25. CR354540.2 ENSDARG00000117517 18452 1.605 - - 0.825 0.780 - - - - -
26. prx ENSDARG00000017246 6183 1.604 - - 0.856 - 0.748 - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
27. egfra ENSDARG00000013847 2912 1.604 - - - - - 0.898 0.706 - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
28. ttnb ttnb 73721 1.599 - - 0.850 0.749 - - - - -
29. tnnt3a ENSDARG00000030270 112506 1.596 - - 0.840 - 0.756 - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
30. pbxip1a ENSDARG00000071015 4960 1.593 - - 0.718 - - 0.875 - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
31. ckmb ENSDARG00000040565 505935 1.586 - - 0.854 - 0.732 - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
32. tnnt3b ENSDARG00000068457 101827 1.573 - - 0.842 0.731 - - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
33. mylpfb ENSDARG00000002589 70167 1.573 - - 0.817 0.756 - - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
34. gapdh ENSDARG00000043457 68684 1.572 - - 0.790 0.782 - - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
35. ca15a ENSDARG00000015654 2657 1.572 - - - - 0.701 - 0.871 - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
36. ezra ENSDARG00000020944 3105 1.568 - - 0.709 - - 0.859 - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
37. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 1.56 - - 0.809 - 0.751 - - - - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
38. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 1.559 - - 0.817 - 0.742 - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
39. si:dkey-117n7.3 ENSDARG00000092944 2518 1.558 - - - - - - 0.853 0.705 - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
40. tgm2a ENSDARG00000070157 4516 1.547 - - 0.819 - - - - 0.728 - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
41. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.546 - - 0.822 0.724 - - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
42. tubb5 ENSDARG00000037997 18691 1.542 - 0.716 - - - 0.826 - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
43. glula ENSDARG00000099776 14156 1.541 - - - - - 0.829 0.712 - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
44. pck1 ENSDARG00000013522 1657 1.536 - - - - 0.744 - 0.792 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
45. BX294434.1 ENSDARG00000061272 6493 1.531 - - 0.749 0.782 - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
46. tpma ENSDARG00000033683 752432 1.525 - - 0.810 - 0.715 - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
47. zgc:110239 ENSDARG00000077664 7015 1.52 - - - - - 0.769 0.751 - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
48. atp1b1b ENSDARG00000076833 10324 1.519 - - 0.722 0.797 - - - - - ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
49. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 1.503 - - 0.784 0.719 - - - - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
50. jph1a ENSDARG00000058603 2852 1.5 - - 0.776 0.724 - - - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
51. klhl40b ENSDARG00000019125 3633 1.498 - 0.720 - - - - - 0.778 - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
52. tnni2a.4 ENSDARG00000029069 122344 1.492 - - 0.780 - 0.712 - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
53. hhatla ENSDARG00000039051 6598 1.492 - - 0.783 0.709 - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
54. TMEM150A_2 TMEM150A_2 739 1.489 - - - - - - 0.734 0.755 -
55. adpgk2 ENSDARG00000062785 8229 1.488 - - - - - - 0.728 0.760 - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
56. si:dkey-33i11.4 ENSDARG00000099117 8342 1.487 - - - 0.774 - - 0.713 - - si:dkey-33i11.4 [Source:ZFIN;Acc:ZDB-GENE-030131-33]
57. irf6 ENSDARG00000101986 1438 1.479 - 0.747 - - - - - 0.732 - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
58. ryr3 ENSDARG00000071331 6795 1.478 - - 0.773 0.705 - - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
59. ryr1b ENSDARG00000023797 5693 1.476 - - 0.764 - - - - - 0.712 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
60. mgat1b ENSDARG00000036065 996 1.471 - 0.737 - - - - - 0.734 - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
61. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.47 - - 0.765 0.705 - - - - -
62. mt2 ENSDARG00000041623, ENSDARG00000113583 15333 1.453 - - 0.746 - - - 0.707 - - metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
63. tfe3a ENSDARG00000098903 1530 1.447 - - - - - - 0.720 0.727 - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
64. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.425 - - 0.714 0.711 - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
65. BX324201.1 BX324201.1 3302 1.415 - 0.713 0.702 - - - - - -
66. arf2 arf2 12369 0.943 - - - - - 0.943 - - -
67. eif4g2b ENSDARG00000057167 22982 0.94 - - - - - 0.940 - - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
68. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 0.934 - - - - - 0.934 - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
69. tmed2 ENSDARG00000026908 9070 0.923 - - - - - 0.923 - - - transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
70. tmed9 ENSDARG00000004261 10013 0.918 - - - - - 0.918 - - - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
71. clint1a ENSDARG00000025535 4965 0.918 - - - - - 0.918 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
72. eif3f ENSDARG00000077533 24387 0.917 - - - - - 0.917 - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
73. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 0.917 - - - - - 0.917 - - - chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
74. minos1 ENSDARG00000101619 5273 0.917 - - - - - 0.917 - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
75. srsf11 ENSDARG00000098574 12801 0.917 - - - - - 0.917 - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
76. zgc:101000 zgc:101000 9041 0.916 - - - - - 0.916 - - -
77. shroom1 ENSDARG00000094181 2325 0.915 - - - - - 0.915 - - - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
78. aplp2 ENSDARG00000054864 7958 0.912 - - - - - 0.912 - - - amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
79. rbm4.2 ENSDARG00000055080 5241 0.912 - - - - - 0.912 - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
80. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 0.911 - - - - - 0.911 - - - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
81. atp6v0ca ENSDARG00000057853 23277 0.91 - - - - - - 0.910 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
82. ccni ENSDARG00000068214 17558 0.91 - - - - - 0.910 - - - cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
83. kpnb1 ENSDARG00000104889 9282 0.909 - - - - - 0.909 - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
84. sumo1 ENSDARG00000044267 4242 0.906 - - - - - 0.906 - - - small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
85. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 0.906 - - - - - 0.906 - - - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
86. NDNF ENSDARG00000062936 7287 0.905 - - - - - 0.905 - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
87. sdhb ENSDARG00000075768 5493 0.902 - - - - - 0.902 - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
88. gnb4b ENSDARG00000115383 7457 0.901 - - - - - 0.901 - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
89. C19H18orf21_1 C19H18orf21_1 1657 0.901 - - - - - 0.901 - - -
90. snx1a ENSDARG00000071031 3975 0.899 - - - - - 0.899 - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
91. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 0.899 - - - - - 0.899 - - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
92. tmx2b ENSDARG00000007786 3151 0.897 - - - - - 0.897 - - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
93. dars ENSDARG00000070043 6854 0.897 - - - - - 0.897 - - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
94. rrm1 ENSDARG00000014017 7296 0.897 - - - - - 0.897 - - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
95. HNRNPA2B1 HNRNPA2B1 14997 0.897 - - - - - 0.897 - - -
96. PYURF ENSDARG00000045773 4576 0.897 - - - - - 0.897 - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
97. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.896 - - - - - 0.896 - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
98. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 0.896 - - - - - 0.896 - - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
99. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 0.895 - - - - - 0.895 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
100. ndufa2 ENSDARG00000021984 4754 0.895 - - - - - 0.895 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]

There are 682 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA