Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for c1d

Gene Name Gene ID Reads Annotation
c1d ENSDARG00000021112 2839 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]










Genes with expression patterns similar to c1d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. c1d ENSDARG00000021112 2839 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
2. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.774 - 0.818 - - - - - 0.956 - UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
3. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.769 - 0.825 - - - - - 0.944 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
4. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 1.754 - 0.851 - - - - - 0.903 - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
5. top2a ENSDARG00000024488 4273 1.751 - - - - - - - 0.967 0.784 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
6. ncalda ENSDARG00000070688 5069 1.749 - - - - - - 0.803 0.946 - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
7. psma2 ENSDARG00000040121 2504 1.711 - - - - - - 0.797 0.914 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
8. CR354611.2 CR354611.2 2040 1.708 - - - - - - 0.751 0.957 -
9. rbm8a ENSDARG00000016516 8789 1.696 - - - - - - 0.827 0.869 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
10. Sep-06 Sep-06 5465 1.695 - - - - - - - 0.935 0.760
11. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.693 - 0.831 - - - - - 0.862 - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
12. vamp2 ENSDARG00000056877 2158 1.681 - - - - - - - 0.938 0.743 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
13. AP3B2 1874 1.674 - - - - - - - 0.947 0.727 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
14. arih2 ENSDARG00000012848 7087 1.673 - - - - - - 0.713 0.960 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
15. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.673 - - - - - - - 0.936 0.737 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
16. slc25a11 ENSDARG00000035741 3377 1.672 - 0.878 - - - 0.794 - - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
17. zgc:113385 zgc:113385 297 1.667 0.831 0.836 - - - - - - -
18. pcif1 ENSDARG00000099084 2851 1.666 - - - - - - - 0.944 0.722 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
19. clasp2 ENSDARG00000020345 3382 1.666 - 0.748 - - - - - 0.918 - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
20. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.666 - - - - - - - 0.928 0.738 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
21. NIPBL NIPBL 871 1.66 - 0.843 - - - - 0.817 - -
22. dip2a ENSDARG00000078058 1625 1.651 - - - - - 0.713 - 0.938 - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
23. snrpb ENSDARG00000011125 11729 1.643 - - - - - - 0.726 0.917 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
24. CABZ01085888.1 CABZ01085888.1 868 1.639 0.783 0.856 - - - - - - -
25. GATAD2B ENSDARG00000005834 3855 1.637 - - - - - - - 0.918 0.719 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
26. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.635 - 0.873 - - - 0.762 - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
27. ip6k2 ip6k2 3926 1.633 - 0.724 - - - - - 0.909 -
28. dnaja2l ENSDARG00000010745 2367 1.63 - - - - - - - 0.918 0.712 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
29. prpf4bb ENSDARG00000040310 2260 1.629 - 0.799 - - - - 0.830 - - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
30. cox14 ENSDARG00000092124 2229 1.629 - - - - - 0.729 - 0.900 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
31. fzd3a ENSDARG00000021664 1958 1.627 - - - - - - - 0.904 0.723 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
32. arfrp1 ENSDARG00000057857 2840 1.625 - 0.716 - - - - - 0.909 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
33. taf11 ENSDARG00000037855 2624 1.622 - - - - - - 0.710 0.912 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
34. ppp6r3 ENSDARG00000013379 2912 1.611 - - - - - - - 0.908 0.703 protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
35. dnajc5aa ENSDARG00000042948 2885 1.605 - - - - - - - 0.866 0.739 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
36. kif22 ENSDARG00000102624 3694 1.603 - - - - - - - 0.878 0.725 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
37. btg2 ENSDARG00000020298 6616 1.602 - 0.840 - - - - - 0.762 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
38. cnot6 cnot6 7029 1.6 - - - - - - 0.821 0.779 -
39. phactr3b ENSDARG00000019304 447 1.599 0.785 0.814 - - - - - - - phosphatase and actin regulator 3b [Source:ZFIN;Acc:ZDB-GENE-050522-156]
40. zgc:153440 zgc:153440 1444 1.598 - 0.790 - - - - 0.808 - -
41. foxn4 ENSDARG00000010591 2332 1.59 - 0.839 - - - - - 0.751 - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
42. max ENSDARG00000024844 6035 1.581 - - - - - - - 0.819 0.762 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
43. boc ENSDARG00000074335 4832 1.581 - - - - - - 0.706 0.875 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
44. setbp1 ENSDARG00000093799 4499 1.579 - - - - - - - 0.878 0.701 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
45. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.57 - - - - - - - 0.863 0.707 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
46. ccm2 ENSDARG00000013705 3464 1.557 - - - - - - 0.754 0.803 - CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
47. acin1b ENSDARG00000026842 3806 1.556 - - - - - - 0.754 0.802 - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
48. CREBZF ENSDARG00000089787 4261 1.553 - - - - - - 0.798 - 0.755 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
49. mllt10 ENSDARG00000045401 7557 1.549 0.734 - - - - - 0.815 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
50. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 1.547 - 0.755 - - - - 0.792 - - polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
51. lcn15 ENSDARG00000067851 140 1.543 0.711 0.832 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
52. myef2 ENSDARG00000059398 6050 1.542 - - - - - - - 0.830 0.712 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
53. CU571336.2 CU571336.2 2690 1.534 - 0.796 - - - - - - 0.738
54. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 1.527 0.731 0.796 - - - - - - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
55. spcs2 ENSDARG00000042823 10032 1.519 - - - - - - 0.745 0.774 - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
56. TNKS TNKS 2775 1.516 - - - - - - 0.806 - 0.710
57. ccnt1 ENSDARG00000017525 1888 1.514 - - - - - - 0.738 - 0.776 cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
58. eif4h ENSDARG00000042252 6742 1.508 - - - - - 0.747 - - 0.761 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
59. IM:7163548 IM:7163548 6540 1.506 - - - - - - 0.786 0.720 -
60. si:dkey-42i9.4 ENSDARG00000008049 4752 1.499 - 0.770 - - - - 0.729 - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
61. hmgb2b ENSDARG00000053990 11519 1.496 - - - - - - 0.721 - 0.775 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
62. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.492 - - - - - - 0.737 - 0.755 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
63. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.491 - - - - - - - 0.766 0.725 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
64. marcksl1b ENSDARG00000035715 37390 1.491 - - - - - - - 0.785 0.706 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
65. htatip htatip 1553 1.485 - - - - - - 0.746 - 0.739
66. smc1al ENSDARG00000058203 8838 1.479 - - - - - - 0.726 - 0.753 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
67. ptbp2b ENSDARG00000015901 2458 1.477 - 0.755 - - - - - - 0.722 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
68. dctd ENSDARG00000036990 2168 1.475 - 0.723 - - - 0.752 - - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
69. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.475 - - - - - - - 0.773 0.702 zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
70. zgc:114119 ENSDARG00000098992 1090 1.474 - - - 0.774 - - - - 0.700 zgc:114119 [Source:ZFIN;Acc:ZDB-GENE-050913-56]
71. col4a6 ENSDARG00000052061 8636 1.466 - 0.741 - - - - 0.725 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
72. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 1.466 - - - - - - 0.736 - 0.730 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
73. calm1b ENSDARG00000034187 13158 1.462 0.718 - - - - - - 0.744 - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
74. ss18 ENSDARG00000002970 2618 1.46 - - - - - - 0.755 0.705 - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
75. smarca5 ENSDARG00000052348 15433 1.46 - - - - - - 0.704 - 0.756 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
76. bud31 ENSDARG00000017084 3892 1.451 - - - - - - 0.713 - 0.738 BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
77. polr2d ENSDARG00000076509 3386 1.444 - - - - - - 0.732 - 0.712 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
78. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 1.442 - - - - - - 0.733 - 0.709 mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
79. golga7 ENSDARG00000057676 4691 1.44 - - - - - 0.726 - - 0.714 golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
80. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.44 - - - - - - 0.710 - 0.730 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
81. tshz1 ENSDARG00000005026 1948 1.438 - 0.723 - - - - 0.715 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
82. snrpd3l ENSDARG00000076283 7655 1.437 - - 0.718 - - - - - 0.719 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
83. IWS1 2428 1.43 - - - - - 0.721 - - 0.709 IWS1, SUPT6H interacting protein, transcript variant X2
84. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.425 - - - - - - 0.719 0.706 - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
85. aip ENSDARG00000104437 3574 1.421 - - - - - 0.705 - - 0.716 aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
86. snrpf ENSDARG00000105037 10241 1.42 0.714 - - - - - 0.706 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
87. bcl11ab ENSDARG00000063153 3032 1.409 - - - - - - 0.705 - 0.704 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
88. SNORD38 SNORD38 171 0.973 - - - - - - - 0.973 -
89. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.971 - - - - - - - 0.971 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
90. pinx1 ENSDARG00000023532 4452 0.97 - - - - - - - 0.970 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
91. arrb2b ENSDARG00000011545 3126 0.969 - - - - - - - 0.969 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
92. BX957337.1 BX957337.1 1685 0.969 - - - - - - - 0.969 -
93. get4 ENSDARG00000024398 1818 0.967 - - - - - - - 0.967 - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
94. si:dkey-67c22.2 ENSDARG00000055389 6410 0.966 - 0.966 - - - - - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
95. gipc1 ENSDARG00000104483 2913 0.964 - - - - - - - 0.964 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
96. wdr47a ENSDARG00000078136 522 0.963 - - - - - - - 0.963 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
97. MANEAL ENSDARG00000056450 262 0.963 - - - - - - - 0.963 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
98. b2ml ENSDARG00000015887 1060 0.963 - - - - - - - 0.963 - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
99. irf2a ENSDARG00000007387 915 0.963 - - - - - - - 0.963 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
100. ppp1r8 ppp1r8 310 0.962 - - - - - - - 0.962 -

There are 1410 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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