Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for btf3

Gene Name Gene ID Reads Annotation
btf3 ENSDARG00000035400, ENSDARG00000116462 147506 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]










Genes with expression patterns similar to btf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
2. rps24 ENSDARG00000039347 70399 2.4 0.873 - - 0.760 - - 0.767 - - ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
3. kars ENSDARG00000103799 20937 2.244 0.736 0.757 - 0.751 - - - - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
4. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 1.649 - - - 0.842 - - 0.807 - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
5. ttna ttna 101197 1.641 0.805 - - - - - 0.836 - -
6. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 1.6 0.835 - - - - - - - 0.765 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
7. rps27.2 ENSDARG00000055475 51081 1.597 0.831 - - - 0.766 - - - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
8. pebp1 ENSDARG00000042069 6651 1.585 0.748 - 0.837 - - - - - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
9. txlnbb ENSDARG00000076241 6396 1.573 0.841 - - - - 0.732 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
10. aldoaa ENSDARG00000011665 56184 1.559 - - 0.838 - - 0.721 - - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
11. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 1.553 0.732 - - - - 0.821 - - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
12. rab10 ENSDARG00000046106 15618 1.544 - 0.725 0.819 - - - - - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
13. tceb1b 14935 1.544 0.704 - 0.840 - - - - - - transcription elongation factor B (SIII), polypeptide 1b
14. unc45b ENSDARG00000008433 8298 1.541 0.701 - 0.840 - - - - - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
15. rps10 ENSDARG00000034897 71395 1.534 0.826 - - 0.708 - - - - - ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
16. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 1.531 0.819 - 0.712 - - - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
17. NAT16 ENSDARG00000086222 4682 1.52 0.791 0.729 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
18. mibp2 ENSDARG00000101844 17444 1.518 0.727 - - 0.791 - - - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
19. rpl23a ENSDARG00000006316 59831 1.488 0.720 - - 0.768 - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
20. rpl23 ENSDARG00000053457 174183 1.481 0.721 - - - - - - - 0.760 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
21. rpl11 ENSDARG00000043509 123498 1.478 0.739 - - - 0.739 - - - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
22. sh3bgr ENSDARG00000021633 3498 1.474 0.773 - - - - 0.701 - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
23. rps15 ENSDARG00000070849, ENSDARG00000110979 102534 1.473 0.706 - - - - 0.767 - - - ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
24. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 1.467 0.745 - - - - 0.722 - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
25. mrpl54 ENSDARG00000071468 2715 1.465 0.760 0.705 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
26. cnbpa ENSDARG00000045776 8648 1.464 0.755 0.709 - - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
27. atp5f1 16797 1.45 - 0.741 - 0.709 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
28. hsp90aa1.1 ENSDARG00000010478 47784 1.449 0.737 - - - - 0.712 - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
29. rps26 ENSDARG00000037071 40061 1.44 - 0.719 - - - 0.721 - - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
30. tnni2b.1 ENSDARG00000035958 51597 0.925 0.925 - - - - - - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
31. tnnt3a ENSDARG00000030270 112506 0.909 0.909 - - - - - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
32. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 0.894 0.894 - - - - - - - - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
33. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 0.894 0.894 - - - - - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
34. rpl27 ENSDARG00000015128 108038 0.888 0.888 - - - - - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
35. rplp2l ENSDARG00000011201 77026 0.884 0.884 - - - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
36. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 0.876 - - 0.876 - - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
37. faua ENSDARG00000099022 82901 0.873 0.873 - - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
38. si:dkey-151g10.6 si:dkey-151g10.6 344398 0.871 0.871 - - - - - - - -
39. myhz1.3 ENSDARG00000067997 155509 0.871 0.871 - - - - - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
40. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 0.871 - - 0.871 - - - - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
41. rps26l ENSDARG00000030408 146322 0.866 0.866 - - - - - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
42. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.866 0.866 - - - - - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
43. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.865 0.865 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
44. rps14 ENSDARG00000036629 125331 0.858 - - 0.858 - - - - - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
45. si:ch211-226o13.2 84923 0.857 0.857 - - - - - - - - si:ch211-226o13.2
46. mylz3 ENSDARG00000017441 303597 0.855 0.855 - - - - - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
47. smyd1b ENSDARG00000091253 4964 0.853 0.853 - - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
48. eef1a1l1 ENSDARG00000020850 364816 0.848 - - - - 0.848 - - - - eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
49. cap2 ENSDARG00000104478 3266 0.848 0.848 - - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
50. lsm6 ENSDARG00000036995 4377 0.847 0.847 - - - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
51. TMPO TMPO 3264 0.846 0.846 - - - - - - - -
52. ckma ENSDARG00000035327, ENSDARG00000114671 418792 0.845 0.845 - - - - - - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
53. mrpl22 ENSDARG00000109961 1374 0.845 0.845 - - - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
54. actc1b ENSDARG00000099197 324665 0.844 0.844 - - - - - - - - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
55. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 0.843 0.843 - - - - - - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
56. tpma ENSDARG00000033683 752432 0.842 0.842 - - - - - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
57. si:ch211-156j16.1 ENSDARG00000092035 7441 0.842 0.842 - - - - - - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
58. snrpc ENSDARG00000009871 9567 0.84 - - 0.840 - - - - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
59. myl10 ENSDARG00000062592 101207 0.84 0.840 - - - - - - - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
60. ank1 ank1 5209 0.84 0.840 - - - - - - - -
61. RPL29 ENSDARG00000077717 88791 0.838 - - 0.838 - - - - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
62. rpl18 ENSDARG00000029533 89500 0.837 - - - 0.837 - - - - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
63. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 0.837 - - 0.837 - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
64. rgs12b ENSDARG00000036774 5088 0.837 - - 0.837 - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
65. CWC15 ENSDARG00000013382 8969 0.837 - - 0.837 - - - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
66. snx7 ENSDARG00000105185 2977 0.836 - - 0.836 - - - - - - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
67. krcp ENSDARG00000040224 5961 0.836 - - 0.836 - - - - - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
68. zcchc8 ENSDARG00000034982 3406 0.836 - - 0.836 - - - - - - zinc finger, CCHC domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060526-6]
69. fam192a ENSDARG00000041631 4113 0.836 - - 0.836 - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
70. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 0.836 - - 0.836 - - - - - - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
71. arglu1a ENSDARG00000019223 8716 0.835 - - 0.835 - - - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
72. kidins220a ENSDARG00000031240 3639 0.835 - - 0.835 - - - - - - kinase D-interacting substrate 220a [Source:ZFIN;Acc:ZDB-GENE-041014-170]
73. PTPLA PTPLA 4044 0.834 0.834 - - - - - - - -
74. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 0.834 - - 0.834 - - - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
75. zgc:110239 ENSDARG00000077664 7015 0.833 - - 0.833 - - - - - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
76. myod1 ENSDARG00000030110 6019 0.833 0.833 - - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
77. spata13 ENSDARG00000062837 5330 0.832 - - 0.832 - - - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
78. ran ENSDARG00000057026 54670 0.832 - - 0.832 - - - - - - RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
79. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 0.832 0.832 - - - - - - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
80. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 0.832 0.832 - - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
81. usp9 ENSDARG00000013708 9057 0.832 - - 0.832 - - - - - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
82. eif2s1a ENSDARG00000005827 5992 0.832 - - 0.832 - - - - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
83. vps35 ENSDARG00000008224 13245 0.832 - - 0.832 - - - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
84. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.83 - - 0.830 - - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
85. acta1b ENSDARG00000055618 195597 0.83 0.830 - - - - - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
86. stac3 ENSDARG00000098883 1765 0.829 0.829 - - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
87. calm1b ENSDARG00000034187 13158 0.829 0.829 - - - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
88. enpp1 ENSDARG00000005789 3267 0.828 0.828 - - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
89. murcb murcb 13655 0.827 0.827 - - - - - - - -
90. casq2 ENSDARG00000008982 21802 0.827 0.827 - - - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
91. glula ENSDARG00000099776 14156 0.827 - - 0.827 - - - - - - glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
92. murca murca 6614 0.826 0.826 - - - - - - - -
93. rpl19 ENSDARG00000013307 122192 0.826 0.826 - - - - - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
94. tnni2a.4 ENSDARG00000029069 122344 0.824 0.824 - - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
95. AIMP1 ENSDARG00000060036 4136 0.824 0.824 - - - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
96. acta1a ENSDARG00000036371 137508 0.824 0.824 - - - - - - - - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
97. atp6v0ca ENSDARG00000057853 23277 0.821 - - 0.821 - - - - - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
98. anp32b ENSDARG00000023330 25013 0.82 - - 0.820 - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
99. rpl36 ENSDARG00000100588 115695 0.818 0.818 - - - - - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
100. mybpc2b ENSDARG00000021265 9618 0.817 0.817 - - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA