Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bsx

Gene Name Gene ID Reads Annotation
bsx ENSDARG00000068976, ENSDARG00000110782 139 brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]










Genes with expression patterns similar to bsx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bsx ENSDARG00000068976, ENSDARG00000110782 139 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
2. nr2e1 ENSDARG00000017107 340 2.31 - - 0.702 - - - - 0.871 0.737 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
3. ENSDARG00000037617 ENSDARG00000037617 1 1.926 1.000 - - - 0.926 - - - -
4. irx2a ENSDARG00000001785 262 1.903 0.972 - - - - - - 0.931 - iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
5. UNC119 UNC119 104 1.901 - - - - 0.926 - - 0.975 -
6. syt5b ENSDARG00000011640 70 1.866 - - - - 0.892 - - 0.974 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
7. cd74a ENSDARG00000009087 20 1.804 1.000 - - - - - - - 0.804 CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
8. fabp7b ENSDARG00000034650 397 1.769 - - - - - - - 0.991 0.778 fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
9. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1.766 - - - - 0.891 - - 0.875 - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
10. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.761 0.786 - - - - - - 0.975 - BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
11. gnat1 ENSDARG00000044199 251 1.748 - - - - 0.911 - - - 0.837 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
12. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.702 1.000 - 0.702 - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
13. wnt8b ENSDARG00000006911 98 1.69 - - - - - - - 0.974 0.716 wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
14. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.686 0.865 - - - - - - 0.821 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
15. zgc:103625 ENSDARG00000038770 17 1.66 - - - - 0.728 - - - 0.932 zgc:103625 [Source:ZFIN;Acc:ZDB-GENE-040912-116]
16. zic6 ENSDARG00000071496 402 1.659 - - - - - - - 0.935 0.724 zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
17. scg2b ENSDARG00000038574 345 1.629 - - 0.721 - - - - 0.908 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
18. si:dkey-27c15.3 ENSDARG00000056847 37 1.62 0.841 - - - - - - - 0.779 si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
19. pus3 ENSDARG00000028976 52 1.6 0.896 - - - - - - - 0.704 pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
20. rab11bb_1 ENSDARG00000090086 7 1.557 0.802 - - - - - - - 0.755 RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
21. U8 U8 11 1 1.000 - - - - - - - -
22. CABZ01021435.3 CABZ01021435.3 5 1 1.000 - - - - - - - -
23. sorcs3b ENSDARG00000077349 72 1 1.000 - - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
24. acoxl ENSDARG00000020149 14 1 1.000 - - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
25. g6pcb ENSDARG00000014967 8 1 1.000 - - - - - - - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
26. CAMKV CAMKV 11 1 1.000 - - - - - - - -
27. bcl11ba ENSDARG00000062510 169 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
28. BX005421.6 BX005421.6 4 1 1.000 - - - - - - - -
29. ppm1na ENSDARG00000010231 3 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
30. si:dkey-233h12.4 si:dkey-233h12.4 2 1 1.000 - - - - - - - -
31. SH2D4A ENSDARG00000041378 6 1 1.000 - - - - - - - - SH2 domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-040426-932]
32. TNFRSF11B ENSDARG00000098377 98 1 1.000 - - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
33. si:dkey-69c19.1 si:dkey-69c19.1 37 1 1.000 - - - - - - - -
34. dnd dnd 33 1 1.000 - - - - - - - -
35. esyt1b ENSDARG00000014239 8 1 1.000 - - - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
36. si:ch211-273j9.2 si:ch211-273j9.2 79 1 1.000 - - - - - - - -
37. chgb ENSDARG00000076500 42 1 1.000 - - - - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
38. hamp2 hamp2 67 1 1.000 - - - - - - - -
39. si:ch211-42i9.5 si:ch211-42i9.5 21 1 1.000 - - - - - - - -
40. si:dkey-85k15.4 ENSDARG00000095047 25 1 1.000 - - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
41. HIPK1 HIPK1 8 1 1.000 - - - - - - - -
42. CR318653.1 ENSDARG00000104557 29 1 1.000 - - - - - - - -
43. si:ch211-220f16.1 ENSDARG00000093977 4 1 1.000 - - - - - - - - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
44. rtdr1 rtdr1 158 1 1.000 - - - - - - - -
45. myo10l1 ENSDARG00000074723 21 1 1.000 - - - - - - - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
46. fbxw10 ENSDARG00000086484 11 1 1.000 - - - - - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
47. BX927308.3 BX927308.3 126 1 1.000 - - - - - - - -
48. LRRC41 LRRC41 11 1 1.000 - - - - - - - -
49. si:dkey-11o1.3 ENSDARG00000093279 2 1 1.000 - - - - - - - - si:dkey-11o1.3 [Source:ZFIN;Acc:ZDB-GENE-100921-37]
50. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1 1.000 - - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
51. alpi.2 ENSDARG00000053774 21 1 1.000 - - - - - - - - alkaline phosphatase, intestinal, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-142]
52. PKHD1L1 ENSDARG00000091116 39 1 1.000 - - - - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
53. si:dkey-27i16.2 ENSDARG00000098293 48 1 1.000 - - - - - - - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
54. si:ch73-386o14.1 si:ch73-386o14.1 82 1 1.000 - - - - - - - -
55. cbln4 ENSDARG00000061240 67 1 1.000 - - - - - - - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
56. si:ch211-106h4.9 ENSDARG00000075706 36 1 1.000 - - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
57. ATG7 ENSDARG00000102893 1 1 1.000 - - - - - - - - ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
58. CABZ01062083.1 CABZ01062083.1 40 1 1.000 - - - - - - - -
59. ankdd1b ENSDARG00000025866 51 1 1.000 - - - - - - - - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
60. adrb3b ENSDARG00000052919 16 1 1.000 - - - - - - - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
61. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
62. C6H22orf23 C6H22orf23 15 1 1.000 - - - - - - - -
63. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
64. myl7 ENSDARG00000019096 1023 1 1.000 - - - - - - - - myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
65. ZSWIM2 ENSDARG00000075700 8 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
66. FAM124B ENSDARG00000087489 16 1 1.000 - - - - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
67. stx3a ENSDARG00000001880 69 1 1.000 - - - - - - - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
68. bicd1a ENSDARG00000079496 2 1 1.000 - - - - - - - - bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
69. nisch ENSDARG00000043077 11 1 1.000 - - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
70. ggt1l2.2 ENSDARG00000087054 1 1 1.000 - - - - - - - - gamma-glutamyltransferase 1 like 2.2 [Source:ZFIN;Acc:ZDB-GENE-090312-37]
71. C4H12orf39 C4H12orf39 73 1 1.000 - - - - - - - -
72. or131-1 ENSDARG00000005865 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 131, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-45]
73. cabp4 ENSDARG00000008866 4 1 1.000 - - - - - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]
74. hrh3 ENSDARG00000035942 32 1 1.000 - - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
75. FBXL21 FBXL21 6 1 1.000 - - - - - - - -
76. si:dkeyp-79c2.1 42 1 1.000 - - - - - - - - si:dkeyp-79c2.1, transcript variant X2
77. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 1.000 - - - - - - - -
78. wu:fb64b08 wu:fb64b08 8 1 1.000 - - - - - - - -
79. TRIM35_12 TRIM35_12 2 1 1.000 - - - - - - - -
80. xrra1 ENSDARG00000089578 18 1 1.000 - - - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
81. si:ch73-299h12.9 ENSDARG00000104488 81 1 1.000 - - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
82. ENSDARG00000089062 ENSDARG00000089062 7 1 1.000 - - - - - - - -
83. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
84. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
85. trim35-29 ENSDARG00000055730 24 1 1.000 - - - - - - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
86. guca1c ENSDARG00000030758 9 1 1.000 - - - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
87. CR759816.1 ENSDARG00000098977 27 1 1.000 - - - - - - - -
88. BX323793.1 ENSDARG00000104134 24 1 1.000 - - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
89. anpepb ENSDARG00000103878 8 1 1.000 - - - - - - - - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
90. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1 1.000 - - - - - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
91. si:rp71-36a1.1 ENSDARG00000095295 13 1 1.000 - - - - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
92. CR391995.1 ENSDARG00000098041 48 1 1.000 - - - - - - - -
93. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 1.000 - - - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
94. als2a ENSDARG00000075111 29 1 1.000 - - - - - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
95. myo1f ENSDARG00000078734 100 1 1.000 - - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
96. crybb1l1 ENSDARG00000007576 1020 1 1.000 - - - - - - - - crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
97. CR388002.2 CR388002.2 3 1 1.000 - - - - - - - -
98. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
99. lcp1 ENSDARG00000023188 298 1 1.000 - - - - - - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
100. ift81 ENSDARG00000007444 97 1 1.000 - - - - - - - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]

There are 1006 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA