Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for brwd3

Gene Name Gene ID Reads Annotation
brwd3 ENSDARG00000035540 92 bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]










Genes with expression patterns similar to brwd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brwd3 ENSDARG00000035540 92 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
2. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 2.422 0.729 - - - - - 0.888 - 0.805 kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
3. HABP4 HABP4 33 1.888 - - - - - 1.000 0.888 - -
4. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.863 - 0.863 - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
5. RAB38 122 1.857 - 0.857 - - - 1.000 - - - RAB38, member RAS oncogene family
6. ENSDARG00000096199 ENSDARG00000096199 15 1.841 - 0.841 - - - 1.000 - - -
7. svopb ENSDARG00000014951 1 1.841 - 0.841 - - - 1.000 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
8. CABZ01086354.1 CABZ01086354.1 22 1.841 - 0.841 - - - 1.000 - - -
9. snai3 ENSDARG00000031243 31 1.841 - 0.841 - - - 1.000 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
10. ZNFX1 ENSDARG00000100280 118 1.835 - 0.835 - - - 1.000 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
11. sagb ENSDARG00000038378 28 1.807 - - - - - 1.000 - - 0.807 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
12. zte25 zte25 29 1.791 - 0.918 - - - 0.873 - - -
13. rtn4rl1b ENSDARG00000098528 31 1.781 - - - - - 1.000 - - 0.781 reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
14. ube2b ENSDARG00000026035 51 1.774 - - - - - 0.963 0.811 - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
15. Metazoa_SRP_25 Metazoa_SRP_25 13 1.714 - 0.841 - - - 0.873 - - -
16. gdf6a ENSDARG00000053479 121 1.704 0.704 1.000 - - - - - - - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
17. hif1aa ENSDARG00000006181 109 1.696 0.778 0.918 - - - - - - - hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]
18. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1.687 - 0.705 - - - 0.982 - - -
19. bora ENSDARG00000042688, ENSDARG00000112916 402 1.66 - 0.839 - - - - 0.821 - - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
20. FHDC1_2 FHDC1_2 133 1.655 - - - - - 0.808 0.847 - -
21. ARSI_1 ARSI_1 38 1.653 - 0.764 - - - 0.889 - - -
22. brf2 ENSDARG00000002060 81 1.628 - 0.841 - - - - 0.787 - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
23. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.627 - 0.925 - - - - 0.702 - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
24. CLDND1 CLDND1 155 1.611 - - - - - - 0.846 - 0.765
25. zp3b ENSDARG00000039828 15 1.6 - 0.841 - - - - 0.759 - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
26. dlg4 88 1.599 - 0.863 - - - - - - 0.736 discs large MAGUK scaffold protein 4, transcript variant X5
27. usp46 ENSDARG00000045343 65 1.596 0.736 0.860 - - - - - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
28. CR388042.1 ENSDARG00000106267 18 1.593 - 0.841 - - - - 0.752 - -
29. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.585 - 0.841 - - - 0.744 - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
30. lrp11 ENSDARG00000034076 313 1.574 - 0.858 - - - - - - 0.716 low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
31. lrtomt lrtomt 39 1.571 - - - - - 0.842 0.729 - -
32. CABZ01080370.1 CABZ01080370.1 58 1.559 - 0.747 - - - - 0.812 - -
33. CR759921.2 CR759921.2 583 1.547 - - - - - - 0.824 - 0.723
34. si:ch73-191k20.3 ENSDARG00000094206 104 1.536 - 0.830 - - - - - - 0.706 si:ch73-191k20.3 [Source:ZFIN;Acc:ZDB-GENE-090312-62]
35. im:7154842 im:7154842 434 1.5 - 0.776 - - - - - - 0.724
36. pls1 ENSDARG00000039272 39 1.492 - 0.761 - - - 0.731 - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
37. mov10b.1 ENSDARG00000061177 370 1.488 0.715 0.773 - - - - - - - Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
38. ZBTB8A ENSDARG00000059226 98 1.477 - 0.744 - - - - - - 0.733 zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
39. CU855815.2 CU855815.2 80 1.477 - - - - - 0.718 - - 0.759
40. SUSD3 SUSD3 64 1.467 0.742 0.725 - - - - - - -
41. thnsl2 ENSDARG00000032584 59 1.425 0.712 - - - - - - - 0.713 threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
42. scn4ab ENSDARG00000034588 109 1.421 - 0.714 - - - - 0.707 - - sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]
43. si:dkey-29j8.5 si:dkey-29j8.5 9 1.404 - - - - - 0.702 0.702 - -
44. illr3 ENSDARG00000018327 5 1 - - - - - 1.000 - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
45. RBBP6_3 RBBP6_3 34 1 - - - - - 1.000 - - -
46. NUGGC_2 NUGGC_2 2 1 - - - - - 1.000 - - -
47. VASP VASP 22 1 - - - - - 1.000 - - -
48. gdf9 ENSDARG00000003229 4 1 - - - - - 1.000 - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
49. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - 1.000 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
50. CABZ01063789.1 CABZ01063789.1 1 1 - - - - - 1.000 - - -
51. TTF1_2 TTF1_2 26 1 - - - - - 1.000 - - -
52. CU681840.1 CU681840.1 3 1 - - - - - 1.000 - - -
53. tatdn2 ENSDARG00000070618 10 1 - - - - - 1.000 - - - TatD DNase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081022-51]
54. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - - - - - 1.000 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
55. CCDC37 CCDC37 10 1 - - - - - 1.000 - - -
56. si:dkey-15h8.7 si:dkey-15h8.7 43 1 - - - - - 1.000 - - -
57. timd4 ENSDARG00000077257 4 1 - - - - - 1.000 - - - T cell immunoglobulin and mucin domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-080303-10]
58. smtna ENSDARG00000074652 6 1 - - - - - 1.000 - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
59. BX005376.2 BX005376.2 1 1 - - - - - 1.000 - - -
60. si:dkeyp-33e11.1 6 1 - - - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
61. drc1 ENSDARG00000042182 39 1 - - - - - 1.000 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
62. sox8 sox8 109 1 - - - - - 1.000 - - -
63. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - - - - - 1.000 - - -
64. EVI5L ENSDARG00000052766 8 1 - - - - - 1.000 - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
65. fgf23 ENSDARG00000045854 2 1 - - - - - 1.000 - - - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
66. si:dkey-71b5.2 si:dkey-71b5.2 10 1 - - - - - 1.000 - - -
67. slc5a2 ENSDARG00000100919 47 1 - - - - - 1.000 - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
68. polm ENSDARG00000103470 49 1 - - - - - 1.000 - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
69. C8H1orf228 C8H1orf228 72 1 - - - - - 1.000 - - -
70. irge4 ENSDARG00000070317 1 1 - - - - - 1.000 - - - immunity-related GTPase family, e4 [Source:ZFIN;Acc:ZDB-GENE-051212-2]
71. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1 - - - - - 1.000 - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
72. GRM8 GRM8 4 1 - - - - - 1.000 - - -
73. CU633857.1 ENSDARG00000115315 21 1 - - - - - 1.000 - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
74. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - - - 1.000 - - -
75. C12H17orf62_1 C12H17orf62_1 83 1 - - - - - 1.000 - - -
76. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 - - - - - 1.000 - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
77. HIPK1 HIPK1 8 1 - - - - - 1.000 - - -
78. CU929356.4 CU929356.4 86 1 - - - - - 1.000 - - -
79. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - - - - 1.000 - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
80. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - 1.000 - - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
81. si:dkey-66i24.10 si:dkey-66i24.10 6 1 - - - - - 1.000 - - -
82. sc:d136 sc:d136 2 1 - - - - - 1.000 - - -
83. rfxank ENSDARG00000016730 12 1 - - - - - 1.000 - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
84. slc25a38a ENSDARG00000059805 236 1 - - - - - 1.000 - - - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
85. sult3st3 ENSDARG00000042920, ENSDARG00000094089 1 1 - - - - - 1.000 - - - sulfotransferase family 3, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-628]
86. mbpa ENSDARG00000036186 4 1 - - - - - 1.000 - - - myelin basic protein a [Source:ZFIN;Acc:ZDB-GENE-030128-2]
87. cers4a ENSDARG00000031387 19 1 - - - - - 1.000 - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
88. zgc:153311 ENSDARG00000015964 85 1 - - - - - 1.000 - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
89. mei4 ENSDARG00000043912 10 1 - - - - - 1.000 - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
90. ZNRF4 ZNRF4 16 1 - - - - - 1.000 - - -
91. C5H9orf9 C5H9orf9 6 1 - - - - - 1.000 - - -
92. dock11 ENSDARG00000062485 17 1 - - - - - 1.000 - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
93. PROC PROC 11 1 - - - - - 1.000 - - -
94. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 1 - - - - - 1.000 - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
95. CU467646.3 ENSDARG00000099076 36 1 - - - - - 1.000 - - - mucin-2-like [Source:NCBI gene;Acc:108179180]
96. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - - 1.000 - - -
97. si:dkey-21h14.8 ENSDARG00000096083 1 1 - - - - - 1.000 - - - si:dkey-21h14.8 [Source:ZFIN;Acc:ZDB-GENE-110913-34]
98. arhgap30 arhgap30 6 1 - - - - - 1.000 - - -
99. si:dkey-115f9.3 7 1 - - - - - 1.000 - - - si:dkey-115f9.3, transcript variant X2
100. p4ha3 ENSDARG00000103692 2 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]

There are 914 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA