Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for brip1

Gene Name Gene ID Reads Annotation
brip1 ENSDARG00000074410, ENSDARG00000113993 501 BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]










Genes with expression patterns similar to brip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brip1 ENSDARG00000074410, ENSDARG00000113993 501 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
2. gpr98 gpr98 717 2.418 - 0.849 - 0.858 - 0.711 - - -
3. zgc:165515 ENSDARG00000116300 182 2.353 - 0.705 - 0.941 - 0.707 - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
4. atrnl1b ENSDARG00000006420 641 2.288 - - - 0.723 - 0.710 0.855 - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
5. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.826 - - 0.998 - - - 0.828 - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
6. rybpa ENSDARG00000037773 904 1.81 - 0.875 - 0.935 - - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
7. fbxw2 ENSDARG00000009745 618 1.807 - - - 0.907 - - 0.900 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
8. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.799 - - 0.937 0.862 - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
9. si:dkey-240e12.6 ENSDARG00000110137 674 1.789 - - 1.000 0.789 - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
10. rnf150a ENSDARG00000024827 1903 1.787 - - - 0.902 - - 0.885 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
11. tmem229b ENSDARG00000060569 516 1.782 - 0.877 - 0.905 - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
12. stx11a ENSDARG00000044039 39 1.773 - 0.837 - - - - 0.936 - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
13. phf10 ENSDARG00000070084 1210 1.772 - - - 0.946 - - 0.826 - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
14. tmem187 ENSDARG00000051989 136 1.765 0.813 - - - - - 0.952 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
15. gpn2 ENSDARG00000103127 304 1.753 - - - 0.844 - - 0.909 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
16. daam1b ENSDARG00000009689 1520 1.746 - - 0.997 0.749 - - - - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]
17. CABZ01073417.1 CABZ01073417.1 232 1.739 0.806 - - - - - 0.933 - -
18. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 1.729 - 0.835 - - - - 0.894 - - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
19. arcn1b ENSDARG00000031214 4529 1.715 - - 0.987 - - - 0.728 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
20. usp49 ENSDARG00000000229 706 1.708 - 0.834 - 0.874 - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
21. IPO11 ENSDARG00000054224 616 1.708 - 0.827 - 0.881 - - - - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
22. MYO1D ENSDARG00000036863 768 1.706 - - 0.999 - - - 0.707 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
23. rnf14 ENSDARG00000043905 862 1.705 - 0.706 0.999 - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
24. tmem35 ENSDARG00000052567 5685 1.691 - 0.794 0.897 - - - - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.688 - - 0.968 0.720 - - - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
26. tmeff1b ENSDARG00000056740 11253 1.687 - - 0.983 0.704 - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
27. rtn4rl1a ENSDARG00000007856 242 1.68 - 0.768 - - - - 0.912 - - reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
28. ftr65 202 1.678 - - - 0.948 - 0.730 - - - finTRIM family, member 65
29. ube2e2 ENSDARG00000034670 5918 1.676 - - 0.891 0.785 - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
30. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.66 - - 0.905 0.755 - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
31. WDR77 2463 1.659 - - 0.900 0.759 - - - - - WD repeat domain 77
32. josd2 ENSDARG00000057626, ENSDARG00000111978 273 1.659 - 0.742 - - - - 0.917 - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
33. gpr37b ENSDARG00000033296 283 1.659 - 0.838 - - - - 0.821 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
34. NHSL1 NHSL1 182 1.655 - - - 0.935 - 0.720 - - -
35. dixdc1b ENSDARG00000056267 307 1.654 - 0.727 - 0.927 - - - - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
36. nek6 ENSDARG00000037963 316 1.643 - - - 0.907 - - 0.736 - - NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
37. rp2 ENSDARG00000044339 313 1.642 0.731 - - 0.911 - - - - - RP2, ARL3 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-040426-2795]
38. slc5a3b ENSDARG00000077812 153 1.641 - 0.717 - 0.924 - - - - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
39. bik ENSDARG00000045549 18 1.639 0.802 0.837 - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
40. GPR180 73 1.636 - - - 0.935 - 0.701 - - - G protein-coupled receptor 180, transcript variant X2
41. cxxc1 cxxc1 914 1.635 0.770 - - 0.865 - - - - -
42. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 1.632 0.782 - - - - - 0.850 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
43. im:6904045 ENSDARG00000115174 179 1.632 0.726 0.906 - - - - - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
44. si:dkey-75a21.2 ENSDARG00000093188 258 1.62 - 0.846 - - - - 0.774 - - si:dkey-75a21.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6823]
45. si:ch211-165l15.1 si:ch211-165l15.1 10 1.619 0.782 0.837 - - - - - - -
46. traf7 ENSDARG00000060207 20 1.618 - 0.902 - - - 0.716 - - - TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]
47. cbx4 ENSDARG00000099441 372 1.613 - 0.770 - 0.843 - - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
48. ptgdsb.2 ENSDARG00000071626 105 1.612 0.782 0.830 - - - - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
49. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.609 0.719 - - - - - 0.890 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
50. zgc:63831 ENSDARG00000009313 895 1.605 - 0.835 - - - - 0.770 - - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
51. senp5 ENSDARG00000060646 303 1.595 - 0.735 - - - - 0.860 - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
52. rnf19b ENSDARG00000060926 157 1.592 - - - - - 0.775 0.817 - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
53. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.586 - - - 0.744 - 0.842 - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
54. prkx ENSDARG00000060716 530 1.581 - - - 0.840 - - 0.741 - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
55. snrnp25 ENSDARG00000020363 588 1.566 - - - 0.808 - - 0.758 - - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
56. armc1l ENSDARG00000020887 1219 1.565 - 0.768 - 0.797 - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
57. si:ch211-229g14.3 ENSDARG00000095101 5 1.556 0.802 - - - - 0.754 - - - si:ch211-229g14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-187]
58. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 1.547 - 0.758 - - - 0.789 - - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
59. si:dkey-229d11.5 ENSDARG00000094392 33 1.546 0.709 0.837 - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
60. si:dkey-253d23.3 ENSDARG00000095643 66 1.543 0.814 0.729 - - - - - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
61. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.542 - - 0.732 0.810 - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
62. BX927318.1 ENSDARG00000097713 199 1.538 - 0.743 - - - - 0.795 - -
63. retsat ENSDARG00000018600 832 1.532 - 0.762 - - - - 0.770 - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
64. rab18b ENSDARG00000098344 1154 1.531 0.766 - - - - - 0.765 - - RAB18B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040801-185]
65. RANBP2 ENSDARG00000093125 1854 1.522 - - - 0.756 - - 0.766 - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
66. scyl3 ENSDARG00000027046 643 1.516 - 0.710 - 0.806 - - - - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
67. SPA17 ENSDARG00000069361 141 1.501 - 0.753 - - - - 0.748 - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
68. scamp5 scamp5 797 1.498 - - - 0.753 - 0.745 - - -
69. rpz5 ENSDARG00000075718 1703 1.489 - 0.787 - 0.702 - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
70. stk25a ENSDARG00000002210 372 1.484 - 0.774 - - - - 0.710 - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
71. thap7 ENSDARG00000070704 225 1.475 - 0.708 - - - - 0.767 - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
72. nucb2b ENSDARG00000036291 911 1.463 0.755 - - - - - 0.708 - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
73. C21H17orf85 C21H17orf85 1167 1.454 - - - 0.712 - - 0.742 - -
74. hoxb2a ENSDARG00000000175 1122 1.452 0.706 - - - - - 0.746 - - homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
75. nkx6.1 ENSDARG00000022569 3779 1.446 - - - 0.733 - 0.713 - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
76. ZBTB41 ENSDARG00000054984 464 1 - - 1.000 - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
77. elp6 ENSDARG00000060445, ENSDARG00000115612 458 1 - - 1.000 - - - - - - elongator acetyltransferase complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-060825-249]
78. zgc:171759 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 340 1 - - 1.000 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
79. cacnb2a ENSDARG00000099045 374 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
80. TRIM35_10 TRIM35_10 484 1 - - 1.000 - - - - - -
81. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.999 - - 0.999 - - - - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
82. fryl ENSDARG00000040001 3256 0.999 - - 0.999 - - - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
83. gmpr2 ENSDARG00000061301 1132 0.999 - - 0.999 - - - - - - guanosine monophosphate reductase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1238]
84. mknk1 ENSDARG00000018411 749 0.999 - - 0.999 - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
85. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.999 - - 0.999 - - - - - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
86. laptm4a ENSDARG00000006397 1698 0.999 - - 0.999 - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
87. myo1ea ENSDARG00000036179 891 0.999 - - 0.999 - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
88. slc1a6 ENSDARG00000010096 764 0.999 - - 0.999 - - - - - - solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]
89. CR954963.1 ENSDARG00000097153 1135 0.999 - - 0.999 - - - - - -
90. wdr16 wdr16 532 0.999 - - 0.999 - - - - - -
91. tlx2 ENSDARG00000011273 870 0.999 - - 0.999 - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
92. plxnc1 ENSDARG00000015278 501 0.999 - - 0.999 - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
93. nol12 ENSDARG00000038027 2288 0.999 - - 0.999 - - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
94. aplnra ENSDARG00000002172 955 0.998 - - 0.998 - - - - - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
95. rbl1 ENSDARG00000008141 1217 0.998 - - 0.998 - - - - - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
96. ect2 ENSDARG00000007278 1193 0.998 - - 0.998 - - - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
97. dna2 ENSDARG00000078759 846 0.998 - - 0.998 - - - - - - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
98. hdac10 ENSDARG00000086458 676 0.998 - - 0.998 - - - - - - histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
99. six1b ENSDARG00000026473 1908 0.997 - - 0.997 - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
100. abhd4 ENSDARG00000102887 748 0.997 - - 0.997 - - - - - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]

There are 1782 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA