Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for brf1b

Gene Name Gene ID Reads Annotation
brf1b ENSDARG00000005002, ENSDARG00000115325 276 BRF1, RNA polymerase III transcription initiation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-6248]










Genes with expression patterns similar to brf1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brf1b ENSDARG00000005002, ENSDARG00000115325 276 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BRF1, RNA polymerase III transcription initiation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-6248]
2. BX511021.3 ENSDARG00000117414 592 1.636 - - - 0.758 - - 0.878 - -
3. fam101b 398 1.61 - 0.805 - - - - 0.805 - - family with sequence similarity 101, member B
4. nptnb ENSDARG00000043864 165 1.569 - - - 0.792 - 0.777 - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
5. CU928083.1 ENSDARG00000097907 1279 1.548 - - - 0.827 0.721 - - - -
6. GABRG1 ENSDARG00000101995 201 1.535 - - - 0.740 - 0.795 - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
7. PTP4A2 PTP4A2 185 1.508 0.702 0.806 - - - - - - -
8. sypb ENSDARG00000002230 262 1.465 - 0.717 - - - 0.748 - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
9. hrasb ENSDARG00000005651 662 1.463 - - - 0.708 - 0.755 - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
10. skiv2l2 760 1.444 - - - 0.709 - 0.735 - - - superkiller viralicidic activity 2-like 2
11. zgc:64189 ENSDARG00000033501 244 0.939 - - - - - - 0.939 - - zgc:64189 [Source:ZFIN;Acc:ZDB-GENE-040426-1397]
12. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.915 - - - - - - 0.915 - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
13. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.91 - - - - - - 0.910 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
14. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 0.898 - - - - - - 0.898 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
15. C18H16orf70 C18H16orf70 542 0.892 - - - - - - 0.892 - -
16. magi2 magi2 301 0.89 - - - - - - 0.890 - -
17. atn1 ENSDARG00000092067 257 0.884 - - - - - 0.884 - - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
18. gatsl2 1618 0.881 - - - - - - 0.881 - - GATS protein-like 2
19. vps13d ENSDARG00000017986 183 0.881 0.881 - - - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
20. fth1b ENSDARG00000007975 96 0.88 - - - - - 0.880 - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
21. IL17RD ENSDARG00000098359 2309 0.878 - - - - - - 0.878 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
22. zgc:153372 ENSDARG00000068967 358 0.874 - - - 0.874 - - - - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
23. sox7 ENSDARG00000030125 806 0.874 - - - 0.874 - - - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
24. ncbp2 ENSDARG00000014898 232 0.872 - - - 0.872 - - - - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
25. ankhb ENSDARG00000014969 328 0.871 - - - - - - 0.871 - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
26. CU855890.3 CU855890.3 307 0.867 - - - - - - 0.867 - -
27. plch2a ENSDARG00000059960 222 0.867 - - - 0.867 - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
28. polg2 ENSDARG00000074933 117 0.865 - - - 0.865 - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
29. taf5l ENSDARG00000025808 556 0.864 - - - 0.864 - - - - - TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]
30. tcp11l1 ENSDARG00000031890 257 0.86 - - - 0.860 - - - - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
31. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 0.858 - - - 0.858 - - - - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
32. nudt5 ENSDARG00000078073 779 0.858 - - - - - - 0.858 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
33. si:ch211-113e8.10 ENSDARG00000079631 498 0.858 - - - - - - 0.858 - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
34. slmapb ENSDARG00000020764, ENSDARG00000117032 112 0.857 - - - 0.857 - - - - - sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]
35. nde1 ENSDARG00000103902 557 0.857 - - - - - - 0.857 - - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
36. CABZ01032467.1 CABZ01032467.1 400 0.856 - - - 0.856 - - - - -
37. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.856 - - - 0.856 - - - - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
38. zfand2a ENSDARG00000103511 829 0.852 - - - - - - 0.852 - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
39. e4f1 ENSDARG00000038243 160 0.852 - - - 0.852 - - - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
40. TBC1D24 ENSDARG00000069339 1300 0.851 - - - - - - 0.851 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
41. si:dkey-17e16.8 284 0.849 - - - - - - 0.849 - - si:dkey-17e16.8
42. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 0.848 - - - - - - 0.848 - -
43. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 0.846 - - - - - - 0.846 - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
44. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.845 - - - - - - 0.845 - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
45. gpr173 ENSDARG00000042922 238 0.844 - - - 0.844 - - - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
46. LRRN3 LRRN3 261 0.843 - - - 0.843 - - - - -
47. ptplad1 ptplad1 1084 0.843 - - - - - - 0.843 - -
48. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 0.842 - 0.842 - - - - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
49. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 0.842 - - - 0.842 - - - - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
50. si:dkeyp-82a1.6 ENSDARG00000094336 228 0.84 - - - 0.840 - - - - - si:dkeyp-82a1.6 [Source:ZFIN;Acc:ZDB-GENE-081105-150]
51. smarcc1a ENSDARG00000017397 2957 0.839 - - - - - - 0.839 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
52. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.838 - - - 0.838 - - - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
53. npdc1 npdc1 221 0.838 - - - - - 0.838 - - -
54. trim109 ENSDARG00000062429 321 0.838 - - - 0.838 - - - - - tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]
55. HSCB HSCB 395 0.837 - - - - - - 0.837 - -
56. ar ENSDARG00000067976, ENSDARG00000114287 192 0.836 - - - 0.836 - - - - - androgen receptor [Source:ZFIN;Acc:ZDB-GENE-060131-1]
57. jdp2 jdp2 301 0.836 - - - 0.836 - - - - -
58. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 0.836 - - - 0.836 - - - - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
59. glsb ENSDARG00000040705 1439 0.835 - - - - - - 0.835 - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
60. fam20b ENSDARG00000008573 1084 0.834 - - - - - - 0.834 - - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
61. nlgn3b ENSDARG00000062376 171 0.833 - - - 0.833 - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
62. klhl36 ENSDARG00000030251, ENSDARG00000113095 32 0.832 - - - 0.832 - - - - - kelch-like family member 36 [Source:ZFIN;Acc:ZDB-GENE-050522-324]
63. zgc:110130 ENSDARG00000039203 352 0.832 - - - - - 0.832 - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
64. keap1a ENSDARG00000016132 363 0.832 - - - - - - 0.832 - - kelch-like ECH-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-556]
65. RAPGEFL1 ENSDARG00000079912 1074 0.832 - - - - - - 0.832 - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
66. rap2ab ENSDARG00000040246 63 0.831 - - - - - 0.831 - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
67. dcun1d4 ENSDARG00000092394 258 0.831 - - - 0.831 - - - - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
68. isl2b ENSDARG00000053499 132 0.831 - - - - - 0.831 - - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
69. grin2bb ENSDARG00000030376 60 0.831 - - - - - 0.831 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
70. tsen15 ENSDARG00000069280 240 0.83 - - - 0.830 - - - - - TSEN15 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-041008-211]
71. GMIP ENSDARG00000077249 43 0.83 - - - 0.830 - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
72. 5S_rRNA_18 5S_rRNA_18 270 0.829 - - - 0.829 - - - - -
73. PHLDB2_1 PHLDB2_1 316 0.829 - - - 0.829 - - - - -
74. slc6a13l 121 0.829 - - - - - - 0.829 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
75. tbc1d16 ENSDARG00000036994 948 0.829 - - - 0.829 - - - - - TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]
76. zdhhc16b ENSDARG00000015989 193 0.829 - - - 0.829 - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
77. slc16a8 ENSDARG00000045153 478 0.828 0.828 - - - - - - - - solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
78. maml3 ENSDARG00000079552 357 0.827 - - - 0.827 - - - - - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
79. zgc:154054 ENSDARG00000099923 19 0.827 - - - 0.827 - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
80. nudt14 ENSDARG00000062335, ENSDARG00000111320 294 0.827 - - - 0.827 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 14 [Source:ZFIN;Acc:ZDB-GENE-041014-254]
81. zgc:173652 22 0.826 - - - 0.826 - - - - - zgc:173652
82. PLEKHG3 72 0.825 - - - 0.825 - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
83. appl1 1019 0.825 - - - 0.825 - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
84. CR548626.3 CR548626.3 423 0.825 - - - - - 0.825 - - -
85. adat3 ENSDARG00000005640 96 0.824 - - - 0.824 - - - - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
86. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.824 - - - 0.824 - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
87. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.824 - - - - - - 0.824 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
88. dnase1l3 dnase1l3 455 0.824 - - - - - - 0.824 - -
89. arhgap22 ENSDARG00000021255 117 0.824 - - - 0.824 - - - - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
90. rbm41 ENSDARG00000054096 498 0.823 - - - 0.823 - - - - - RNA binding motif protein 41 [Source:ZFIN;Acc:ZDB-GENE-041114-107]
91. haao ENSDARG00000076487 143 0.822 - - - 0.822 - - - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
92. dnajb9b ENSDARG00000016886 270 0.822 - - - - - - 0.822 - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
93. hsd17b4 ENSDARG00000101239 301 0.821 - - - 0.821 - - - - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
94. exoc3l4 ENSDARG00000058180 923 0.821 - - - 0.821 - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
95. zgc:110353 ENSDARG00000039443 80 0.821 - - - 0.821 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
96. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 0.821 - - - 0.821 - - - - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
97. amn1 ENSDARG00000070478, ENSDARG00000111705 72 0.821 - - - 0.821 - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
98. gas8 ENSDARG00000101431 140 0.819 - - - - - - 0.819 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
99. zgc:175214 ENSDARG00000022891 1013 0.819 - - - 0.819 - - - - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
100. si:dkey-42p8.3 1117 0.818 - - - 0.818 - - - - - si:dkey-42p8.3, transcript variant X1

There are 570 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA