Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for brf1a

Gene Name Gene ID Reads Annotation
brf1a ENSDARG00000017835 206 BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]










Genes with expression patterns similar to brf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brf1a ENSDARG00000017835 206 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
2. lygl1 ENSDARG00000056874 309 2.449 0.992 0.714 - - - - - 0.743 - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
3. dock9b ENSDARG00000016311 122 2.44 - 0.926 - - - - - 0.720 0.794 dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
4. C9H3orf38 C9H3orf38 83 2.426 - 0.740 - - - 0.830 - 0.856 -
5. PSD PSD 367 2.373 0.885 - - - - - - 0.784 0.704
6. TMEM151A ENSDARG00000077986 78 1.961 0.996 - - - - - 0.965 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
7. pho ENSDARG00000035133 670 1.954 0.990 - 0.964 - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
8. CABZ01073174.1 CABZ01073174.1 581 1.887 0.903 - 0.984 - - - - - -
9. strada ENSDARG00000037929 1614 1.837 0.985 - 0.852 - - - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
10. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.792 0.916 - 0.876 - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
11. ACTR3 ENSDARG00000091138 1739 1.786 0.897 - 0.889 - - - - - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
12. layna ENSDARG00000035169 515 1.78 - - 0.965 - - - 0.815 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
13. CU855890.3 CU855890.3 307 1.775 - - 0.955 - - 0.820 - - -
14. pou5f3 ENSDARG00000044774 212 1.766 0.998 - - - - - - - 0.768 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
15. thoc3 ENSDARG00000056517 909 1.764 0.978 0.786 - - - - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
16. mnd1 ENSDARG00000074451 182 1.76 0.998 0.762 - - - - - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
17. lama5 ENSDARG00000058543 2782 1.751 - - 0.944 - - - - 0.807 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
18. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1.74 - - 0.973 - - - 0.767 - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
19. hoxa5a ENSDARG00000102501 1667 1.734 - - 0.971 - - - 0.763 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
20. mxra5b ENSDARG00000076309 190 1.733 - - 0.992 - - - - 0.741 - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
21. IER2 IER2 604 1.712 0.765 - 0.947 - - - - - -
22. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 1.712 0.984 0.728 - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
23. gab1 ENSDARG00000037018 1489 1.689 0.929 - 0.760 - - - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
24. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.687 0.879 - 0.808 - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
25. CABZ01084273.1 CABZ01084273.1 16 1.682 - - - - - 0.838 0.844 - -
26. pigf ENSDARG00000032780 7 1.682 - - - - - 0.838 0.844 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
27. CABZ01060813.1 CABZ01060813.1 12 1.682 - - - - - 0.838 0.844 - -
28. fmnl2b ENSDARG00000075041 1744 1.672 0.912 - - - - - 0.760 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
29. GPR153 ENSDARG00000087601 48 1.666 - - - - - 0.822 0.844 - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
30. si:dkey-233e3.1 si:dkey-233e3.1 7 1.661 - 0.711 - - - 0.950 - - -
31. rassf10a 417 1.654 0.936 - - - - - - 0.718 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
32. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.654 - - 0.935 - - - 0.719 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
33. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.644 - 0.838 - - - - - - 0.806 A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
34. pde8a ENSDARG00000087941 11 1.641 - 0.797 - - - - 0.844 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
35. ARHGAP35 2409 1.621 0.778 - 0.843 - - - - - - Rho GTPase activating protein 35b, transcript variant X2
36. TNFRSF11B ENSDARG00000098377 98 1.62 - - - - - - - 0.861 0.759 tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
37. lphn3.1 lphn3.1 756 1.614 - 0.728 - - - - 0.886 - -
38. FAM196A 82 1.611 - - - - - 0.838 - - 0.773 family with sequence similarity 196 member A
39. CYP46A1 CYP46A1 16 1.606 - - - - - - 0.844 - 0.762
40. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.605 0.839 - - - - - - 0.766 - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
41. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.604 0.776 - 0.828 - - - - - - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
42. C24H18orf8 C24H18orf8 87 1.596 - - - - - - 0.748 0.848 -
43. bmp4 ENSDARG00000019995 2038 1.593 0.739 - 0.854 - - - - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
44. s100z ENSDARG00000038729 442 1.589 0.844 0.745 - - - - - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
45. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.587 0.871 - - - - - 0.716 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
46. plekhf2 ENSDARG00000021141 529 1.586 0.876 - - - - - - - 0.710 pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
47. ms4a17a.2 ENSDARG00000105674 32 1.584 - 0.711 - - - - - 0.873 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
48. si:dkey-202b22.6 ENSDARG00000045552 190 1.568 - 0.731 - - - - - 0.837 - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
49. slc16a8 ENSDARG00000045153 478 1.566 - 0.739 - - - 0.827 - - - solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
50. psmg1 ENSDARG00000040620 1359 1.562 0.854 0.708 - - - - - - - proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
51. mkks ENSDARG00000016139 70 1.561 - - - - - 0.717 0.844 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
52. ARMCX3 ARMCX3 328 1.558 - - - - - - - 0.743 0.815
53. DNAJB14 ENSDARG00000069996 144 1.558 - - - - - - 0.735 0.823 - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
54. kirrel3a ENSDARG00000075806 36 1.558 - 0.714 - - - - 0.844 - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
55. xrn1 ENSDARG00000091652 2864 1.557 - - 0.787 - - - - 0.770 - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
56. cep68 ENSDARG00000039411 30 1.555 - - - - - 0.783 - - 0.772 centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
57. zgc:174906 ENSDARG00000075314 2187 1.553 0.843 - - - - - 0.710 - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
58. tmem79b ENSDARG00000076861 154 1.553 - 0.757 - - - - - 0.796 - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
59. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.552 0.751 - 0.801 - - - - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
60. slc2a10 ENSDARG00000090820 637 1.551 0.825 - - - - - - 0.726 - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
61. CMA1_8 CMA1_8 10 1.549 - 0.711 - - - 0.838 - - -
62. gas5 279 1.548 - - - - - 0.704 0.844 - - growth arrest-specific 5, transcript variant X4
63. si:ch211-232i5.3 ENSDARG00000086874 1256 1.533 0.803 - - - - - - 0.730 - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
64. rab6bb ENSDARG00000031343 1381 1.532 0.827 - - - - - 0.705 - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
65. sncgb ENSDARG00000109715 1014 1.53 - 0.738 - - - - 0.792 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
66. cradd ENSDARG00000028192 153 1.528 - - - - - - 0.826 - 0.702 CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
67. dpysl3 ENSDARG00000002587 4381 1.515 - - 0.742 - - - 0.773 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
68. pdzd2 ENSDARG00000059801, ENSDARG00000109983 1634 1.515 0.761 - - - - - 0.754 - - PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-297]
69. pkmyt1 ENSDARG00000074730 213 1.507 - - - - - - - 0.752 0.755 protein kinase, membrane associated tyrosine/threonine 1 [Source:ZFIN;Acc:ZDB-GENE-060810-80]
70. stox1 ENSDARG00000062593, ENSDARG00000116897 1174 1.505 - 0.734 - - - - 0.771 - - storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]
71. LYRM9 ENSDARG00000075528 329 1.503 - 0.723 - - - - - 0.780 - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
72. ghdc ENSDARG00000055569 83 1.477 - 0.717 - - - 0.760 - - - GH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-165]
73. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 1.471 - 0.738 - - - - - 0.733 - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
74. TBC1D17 ENSDARG00000005927 163 1.446 - 0.730 - - - 0.716 - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
75. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 1.444 - 0.707 0.737 - - - - - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
76. usp49 ENSDARG00000000229 706 1.433 - 0.733 - - - - 0.700 - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
77. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.426 - 0.711 - - - - - - 0.715 si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
78. tmem91 ENSDARG00000068456 81 1 - - - - - - 1.000 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
79. si:dkey-238f9.1 ENSDARG00000079446 51 1 - - - - - - 1.000 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
80. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - - - - - - 1.000 - -
81. si:dkey-284e7.2 si:dkey-284e7.2 14 1 - - - - - - 1.000 - -
82. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - - 1.000 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
83. RBPMS ENSDARG00000099396 61 1 - - - - - - 1.000 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
84. rnf165a ENSDARG00000077906 133 1 - - - - - - 1.000 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
85. si:dkey-26c10.5 ENSDARG00000088023 9 1 - - - - - - 1.000 - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
86. si:ch211-229b6.1 ENSDARG00000093422 151 0.999 0.999 - - - - - - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
87. CABZ01020207.1 CABZ01020207.1 145 0.999 0.999 - - - - - - - -
88. si:dkey-58f10.12 ENSDARG00000092680 258 0.998 0.998 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
89. si:dkey-7i1.4 si:dkey-7i1.4 77 0.998 0.998 - - - - - - - -
90. si:ch211-191a16.5 ENSDARG00000096545 45 0.998 0.998 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
91. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 0.998 0.998 - - - - - - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
92. TMEM220 ENSDARG00000088981 28 0.998 0.998 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
93. baiap2l1a ENSDARG00000029305 30 0.998 0.998 - - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
94. C17H14orf1 C17H14orf1 256 0.998 0.998 - - - - - - - -
95. exd3 ENSDARG00000063140 119 0.998 0.998 - - - - - - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
96. si:dkey-164n2.1 47 0.998 0.998 - - - - - - - - si:dkey-164n2.1, transcript variant X1
97. plekhg7 ENSDARG00000062855 308 0.997 0.997 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
98. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.997 0.997 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
99. rnf152 ENSDARG00000087782 141 0.997 0.997 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
100. zgc:101562 ENSDARG00000040179 90 0.997 0.997 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]

There are 2214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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