Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for bre

Gene Name Gene ID Reads Annotation
bre bre 1233










Genes with expression patterns similar to bre

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bre bre 1233 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. hug 4100 2.498 - - 0.995 - - - 0.759 - 0.744 HuG, transcript variant X2
3. SPIN4_1 SPIN4_1 2562 2.318 - 0.775 - - - - 0.730 - 0.813
4. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 2.307 - 0.754 - - - - 0.708 - 0.845 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
5. LPL_1 LPL_1 1150 1.905 - - 0.998 - - - - - 0.907
6. derl1 ENSDARG00000021905 4698 1.812 - - 0.927 - - - - - 0.885 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
7. suv420h2 2186 1.807 - - 0.997 - - - 0.810 - - suppressor of variegation 4-20 homolog 2 (Drosophila)
8. si:dkey-94l16.4 ENSDARG00000090142 791 1.785 - 0.787 0.998 - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
9. MON2 ENSDARG00000099798 2359 1.78 - 0.786 0.994 - - - - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
10. adam17b ENSDARG00000093093 792 1.778 - - - - - 0.882 - - 0.896 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
11. ube3d ENSDARG00000026178 244 1.776 - - - - - 0.860 - - 0.916 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
12. zgc:173548 ENSDARG00000070048 558 1.765 - - - - - 0.823 - - 0.942 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
13. bmper ENSDARG00000101980 668 1.743 - - - - - 0.856 - - 0.887 BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
14. ptprk ENSDARG00000063416 742 1.73 - - - - - - - 0.815 0.915 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
15. fosl2 ENSDARG00000040623 2041 1.73 - - 0.998 - - - 0.732 - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
16. nol8 ENSDARG00000044143 425 1.72 - 0.803 - - - - - - 0.917 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
17. exoc7 ENSDARG00000087229 987 1.709 - 0.850 - - - 0.859 - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
18. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 1.695 - - - - - 0.914 0.781 - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
19. RLIM ENSDARG00000079306 514 1.691 - 0.783 - - - - - - 0.908 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
20. otub1b ENSDARG00000011462 4329 1.688 - - - - - 0.810 - - 0.878 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
21. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.683 - - - - - 0.772 - - 0.911 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
22. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.678 - - - - - 0.856 - - 0.822 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
23. qser1 ENSDARG00000074750 597 1.675 - - - - - 0.758 - - 0.917 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
24. psen1 ENSDARG00000004870 1590 1.663 - - - - - 0.815 - - 0.848 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
25. dhdds ENSDARG00000039851 1135 1.644 - 0.756 - - - - - - 0.888 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
26. larp1 ENSDARG00000101722 976 1.638 - - - - - 0.752 - - 0.886 La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
27. eya3 ENSDARG00000036100 1965 1.632 - - - - - 0.711 - - 0.921 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
28. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.628 - - 0.928 - - - 0.700 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
29. triap1 ENSDARG00000014963 646 1.628 - 0.719 - - - - - - 0.909 TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
30. nhej1 ENSDARG00000058893 172 1.619 - - - - - 0.835 - 0.784 - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
31. TRIP10 TRIP10 1079 1.616 - - - - - - 0.720 - 0.896
32. BX088708.1 BX088708.1 6503 1.606 - - - - - 0.721 - - 0.885
33. TANC2 TANC2 1104 1.606 - 0.897 - - - - 0.709 - -
34. xrcc6bp1 662 1.603 - 0.716 - - - - - - 0.887 XRCC6 binding protein 1
35. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.595 - - - - - - 0.791 - 0.804 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
36. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.588 - - - - - 0.744 - - 0.844 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
37. GPR17 ENSDARG00000062030 713 1.588 - - - - - - - 0.746 0.842 G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
38. tox3 ENSDARG00000073957 3075 1.588 - 0.802 - - - - - - 0.786 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
39. melk ENSDARG00000030759 1150 1.586 - - - - - - 0.711 - 0.875 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
40. arhgef28 ENSDARG00000060415 142 1.578 - - - - - 0.840 - 0.738 - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
41. gstal gstal 1865 1.577 - 0.746 - - - - - - 0.831
42. cep104 ENSDARG00000060361 303 1.567 - - - - - 0.853 - 0.714 - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
43. arrdc1b ENSDARG00000079839 236 1.557 - 0.702 - - - 0.855 - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
44. angptl4 ENSDARG00000035859 2701 1.554 - - - - - - - 0.745 0.809 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
45. mtg2 ENSDARG00000063574 299 1.552 - 0.703 - - - 0.849 - - - mitochondrial ribosome-associated GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2209]
46. setd5 ENSDARG00000078576 1974 1.546 - - - - - 0.741 - - 0.805 SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
47. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.52 - 0.764 - - - 0.756 - - - coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
48. rnf114 ENSDARG00000009886 725 1.513 - 0.720 - - - 0.793 - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
49. hivep2 hivep2 422 1.482 - - - - - 0.743 0.739 - -
50. adpgk ENSDARG00000063525, ENSDARG00000115539 754 1.473 - 0.716 - - - - 0.757 - - ADP-dependent glucokinase [Source:ZFIN;Acc:ZDB-GENE-061103-421]
51. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.454 - - - - - 0.744 0.710 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
52. si:ch211-284e13.6 ENSDARG00000092354 929 1.448 - 0.717 - 0.731 - - - - - si:ch211-284e13.6 [Source:ZFIN;Acc:ZDB-GENE-060526-163]
53. zgc:195282 ENSDARG00000079488 475 0.999 - - 0.999 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
54. ck2b ck2b 781 0.998 - - 0.998 - - - - - -
55. CU638868.1 ENSDARG00000115797 487 0.998 - - 0.998 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
56. trim36 ENSDARG00000062794 785 0.998 - - 0.998 - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
57. abi1b ENSDARG00000062991 1564 0.998 - - 0.998 - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
58. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.998 - - 0.998 - - - - - -
59. taf1b ENSDARG00000028937 879 0.998 - - 0.998 - - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
60. fam102aa ENSDARG00000102566 903 0.998 - - 0.998 - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
61. PEG3_5 PEG3_5 1624 0.998 - - 0.998 - - - - - -
62. mfsd11 ENSDARG00000102828 1043 0.998 - - 0.998 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
63. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.998 - - 0.998 - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
64. si:ch73-7i4.1 ENSDARG00000094554 771 0.998 - - 0.998 - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
65. acox1 ENSDARG00000014727 660 0.998 - - 0.998 - - - - - - acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
66. PKP3 PKP3 391 0.998 - - 0.998 - - - - - -
67. tmem223 ENSDARG00000069494 1528 0.998 - - 0.998 - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
68. si:ch73-303g23.4 si:ch73-303g23.4 386 0.998 - - 0.998 - - - - - -
69. C19H1orf85 C19H1orf85 1587 0.998 - - 0.998 - - - - - -
70. pih1d2 ENSDARG00000014849 389 0.998 - - 0.998 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
71. kifc3 ENSDARG00000054978 1220 0.997 - - 0.997 - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
72. exoc5 ENSDARG00000060323 2450 0.997 - - 0.997 - - - - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
73. TACC2 1702 0.997 - - 0.997 - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
74. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.997 - - 0.997 - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
75. plekhh1 ENSDARG00000053835 2123 0.997 - - 0.997 - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
76. si:dkey-57a22.11 ENSDARG00000092651 660 0.997 - - 0.997 - - - - - - si:dkey-57a22.11 [Source:ZFIN;Acc:ZDB-GENE-081104-423]
77. dlg1l ENSDARG00000102216 1960 0.997 - - 0.997 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
78. usp44 ENSDARG00000089861 1532 0.997 - - 0.997 - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
79. atpaf1 ENSDARG00000042799 1309 0.997 - - 0.997 - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
80. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.997 - - 0.997 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
81. dhx38 ENSDARG00000100013 1854 0.996 - - 0.996 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
82. numb ENSDARG00000027279 2905 0.996 - - 0.996 - - - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
83. pip5k1aa ENSDARG00000100396 1644 0.996 - - 0.996 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
84. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.996 - - 0.996 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
85. brms1la ENSDARG00000006235 2011 0.996 - - 0.996 - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
86. CABZ01013938.1 CABZ01013938.1 4497 0.996 - - 0.996 - - - - - -
87. c8b ENSDARG00000039517 1731 0.996 - - 0.996 - - - - - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
88. sp3b ENSDARG00000007812 2928 0.995 - - 0.995 - - - - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
89. syngr2a ENSDARG00000052429 3431 0.995 - - 0.995 - - - - - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
90. C3H19orf43 C3H19orf43 2961 0.995 - - 0.995 - - - - - -
91. coa5 ENSDARG00000094833 1988 0.995 - - 0.995 - - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
92. jph2 ENSDARG00000028625 6706 0.995 - - 0.995 - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
93. ptcd3 ENSDARG00000103856 2107 0.995 - - 0.995 - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
94. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.995 - - 0.995 - - - - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
95. txnipb ENSDARG00000070000 2365 0.994 - - 0.994 - - - - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
96. MRPL21 ENSDARG00000003846 3244 0.993 - - 0.993 - - - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
97. skib ENSDARG00000008034 6518 0.993 - - 0.993 - - - - - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
98. fscn1a ENSDARG00000059680 3999 0.992 - - 0.992 - - - - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
99. UBE2QL1 ENSDARG00000079276 3474 0.991 - - 0.991 - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
100. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.991 - - 0.991 - - - - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]

There are 1372 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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