Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for brd4

Gene Name Gene ID Reads Annotation
brd4 ENSDARG00000078904 5367 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]










Genes with expression patterns similar to brd4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brd4 ENSDARG00000078904 5367 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
2. vta1 ENSDARG00000013732 6072 3.334 - 0.753 0.958 - - 0.876 0.747 - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
3. srsf5b ENSDARG00000027734 6996 2.665 0.957 - 0.955 - - - - - 0.753 serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
4. carm1 ENSDARG00000018698 5599 2.646 0.942 - 0.952 - - - 0.752 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
5. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.53 0.968 - 0.832 - - - - 0.730 - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
6. emc3 ENSDARG00000020607 3406 2.511 - - 0.942 - - 0.759 0.810 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
7. gpc1b ENSDARG00000090585 1393 2.5 0.959 - - - - - 0.718 - 0.823 glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
8. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 2.498 0.952 - - - - 0.730 0.816 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
9. psmc2 ENSDARG00000020101 8095 2.493 0.906 - - - - - 0.782 - 0.805 proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
10. setd8b 2528 2.485 - - 0.944 0.744 - 0.797 - - - SET domain containing (lysine methyltransferase) 8b
11. fkbp3 ENSDARG00000098059 5428 2.391 - - 0.844 - - 0.804 0.743 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
12. ppig ENSDARG00000044431 3427 2.359 - 0.759 - - - - 0.719 - 0.881 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
13. si:ch211-191j22.3 ENSDARG00000095459 959 2.357 - - - - - 0.822 0.721 - 0.814 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
14. lsm14aa ENSDARG00000006600 2298 2.326 - - - 0.729 - 0.779 0.818 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
15. brd1b ENSDARG00000051798 1712 2.284 - - - 0.724 - 0.766 0.794 - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
16. serinc2 ENSDARG00000056532 1406 2.276 - 0.715 - - - 0.810 0.751 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
17. map3k7 ENSDARG00000020469 2845 2.231 - - - 0.704 - 0.719 0.808 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
18. taf6l ENSDARG00000079684 1408 1.925 0.956 - 0.969 - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
19. ppp4cb ENSDARG00000076439 1693 1.886 0.929 - 0.957 - - - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
20. atl3 ENSDARG00000004270 2806 1.847 0.959 - - - - 0.888 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
21. cylda ENSDARG00000060058 768 1.835 0.962 - - - - 0.873 - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
22. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.832 0.960 - - - - - - - 0.872 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
23. faf1 ENSDARG00000022418 2922 1.83 - - 0.955 - - 0.875 - - - Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]
24. bcl9 ENSDARG00000036687 1124 1.813 - - 0.964 - - - - - 0.849 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
25. dsc2l ENSDARG00000039677 2747 1.813 - - 0.970 - - - - - 0.843 desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
26. vangl2 ENSDARG00000027397 2418 1.802 - - 0.954 - - - 0.848 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
27. myo6a ENSDARG00000044016 847 1.801 0.969 - - - - 0.832 - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
28. tmem189 ENSDARG00000042732 4004 1.796 - - 0.952 - - 0.844 - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
29. pip5k1ab ENSDARG00000024642 1988 1.789 - - 0.964 - - 0.825 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
30. actr2a ENSDARG00000052438 5838 1.788 0.897 - - - - 0.891 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
31. whsc1 1701 1.786 0.964 - - - - - 0.822 - - Wolf-Hirschhorn syndrome candidate 1
32. xpo1a ENSDARG00000078041 3544 1.785 - - 0.944 - - - 0.841 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
33. im:7136729 im:7136729 1625 1.785 - - 0.958 - - - - - 0.827
34. gabarapl2 ENSDARG00000027200 5120 1.776 0.928 - - - - 0.848 - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
35. hnrpdl 14288 1.775 0.892 - 0.883 - - - - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
36. arl8a ENSDARG00000078686 4379 1.775 0.946 - - - - 0.829 - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
37. ppp1cab ENSDARG00000071566 4350 1.76 0.936 - - - - - 0.824 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
38. eif5 ENSDARG00000003681 7986 1.759 0.910 - - - - 0.849 - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
39. perp ENSDARG00000063572 6423 1.758 0.923 - - - - - 0.835 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
40. ythdf1 ENSDARG00000016447 3391 1.756 - 0.822 0.934 - - - - - - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
41. fam89a ENSDARG00000079979 4375 1.755 - 0.903 - - - - 0.852 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
42. necap2 ENSDARG00000046002 4372 1.752 - - 0.931 - - - - - 0.821 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
43. si:ch73-367f21.4 ENSDARG00000071097 862 1.752 0.963 - - - - 0.789 - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
44. prkar1aa ENSDARG00000076128 6565 1.75 - - - - - 0.863 0.887 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
45. tmem194a tmem194a 745 1.749 0.963 - - 0.786 - - - - -
46. gdap2 ENSDARG00000021569 1013 1.748 0.929 - - - - 0.819 - - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
47. selt1a 9746 1.747 0.948 - - - - - 0.799 - - selenoprotein T, 1a
48. cd2ap ENSDARG00000015224 2830 1.746 0.976 - - - - - 0.770 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
49. CU571336.1 ENSDARG00000099892 2164 1.746 0.968 - - - - - 0.778 - -
50. bag6 ENSDARG00000075892 3782 1.742 - - 0.944 - - - 0.798 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
51. lman2 ENSDARG00000061854 6251 1.741 - - - - - - 0.902 - 0.839 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
52. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.737 0.960 - - - - - 0.777 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
53. cdc20 ENSDARG00000100741 3264 1.736 - - - - - 0.875 0.861 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
54. ube2g2 ENSDARG00000025404 1774 1.733 - - 0.945 - - - 0.788 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
55. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 1.733 0.958 - - - - 0.775 - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
56. MGST1 MGST1 1958 1.731 0.955 - - - - - 0.776 - -
57. sh3rf1 ENSDARG00000070470 1463 1.73 - - 0.957 - - 0.773 - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
58. zgc:63587 ENSDARG00000017140 8399 1.728 0.958 - - - - - - - 0.770 zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
59. dennd5a ENSDARG00000017006 3426 1.728 - - 0.968 - - - 0.760 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
60. CU633744.1 CU633744.1 2074 1.72 0.930 - - - - - 0.790 - -
61. fkbp8 ENSDARG00000001734 1709 1.718 - 0.890 - - - - - - 0.828 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
62. ppapdc1b ppapdc1b 2866 1.718 - - 0.912 - - 0.806 - - -
63. ARHGEF5 2727 1.716 0.917 - - - - - 0.799 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
64. pcbp2 ENSDARG00000099039 4248 1.715 - 0.747 0.968 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
65. psmc1a ENSDARG00000030537 2799 1.714 0.956 - - - - - 0.758 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
66. aclya ENSDARG00000099079 2324 1.713 0.960 - - - - 0.753 - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
67. srp19 ENSDARG00000035699 2624 1.712 - - 0.967 - - 0.745 - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
68. tmed4 ENSDARG00000024954 3476 1.711 - - 0.953 - - 0.758 - - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
69. PHTF1 PHTF1 1029 1.71 - - - - - 0.932 0.778 - -
70. stt3b ENSDARG00000001890 1836 1.706 - - - - - 0.856 0.850 - - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
71. brox ENSDARG00000013659 1334 1.702 - - - - - 0.849 - - 0.853 BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
72. zgc:56493 ENSDARG00000031435 33407 1.7 - - - - - 0.841 0.859 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
73. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.698 0.965 - - - - - 0.733 - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
74. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.697 - - 0.952 - - - - 0.745 - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
75. rnf183 ENSDARG00000068851 2427 1.697 - - 0.949 - - - 0.748 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
76. ppp2r2a ppp2r2a 5785 1.693 0.957 - - - - - - 0.736 -
77. bcar1 ENSDARG00000056525 6563 1.692 - - - - - 0.851 0.841 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
78. ELMSAN1_1 ELMSAN1_1 1337 1.69 0.967 - - - - - 0.723 - -
79. wdr11 ENSDARG00000075245 743 1.689 - 0.729 0.960 - - - - - - WD repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-081107-28]
80. ZNF576 ZNF576 1447 1.687 - - 0.966 - - 0.721 - - -
81. SIK1 ENSDARG00000058606 1982 1.687 - 0.868 - - - 0.819 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
82. poc1bl ENSDARG00000012745 2451 1.685 0.955 - - - - - 0.730 - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
83. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.684 - - 0.962 - - - - - 0.722 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
84. tnikb ENSDARG00000009031 1836 1.683 - - 0.963 - - 0.720 - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
85. ass1 8099 1.68 0.823 - 0.857 - - - - - - argininosuccinate synthase 1
86. rab5c ENSDARG00000026712 4733 1.679 - - 0.951 - - 0.728 - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
87. hnrnpk ENSDARG00000018914 8841 1.675 - - - - - - 0.759 - 0.916 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
88. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 1.674 0.886 - - - - 0.788 - - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
89. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.674 - - 0.963 0.711 - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
90. GTSF1L GTSF1L 2089 1.673 - 0.727 0.946 - - - - - -
91. dcp1b ENSDARG00000045484 534 1.669 0.967 0.702 - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
92. tfdp1b ENSDARG00000016304 3071 1.667 - 0.809 - - - - - - 0.858 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
93. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 1.664 0.962 0.702 - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
94. srebf2 ENSDARG00000063438 1982 1.663 - - - - - - 0.811 - 0.852 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
95. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.659 - - - - - 0.842 - - 0.817 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
96. tmem231 ENSDARG00000042272 557 1.658 - - 0.958 0.700 - - - - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
97. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.657 - - 0.951 - - - 0.706 - - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
98. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.656 0.956 - - - - 0.700 - - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
99. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.65 - - - 0.754 - 0.896 - - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
100. snrpe ENSDARG00000033175 7462 1.648 - - - - - - 0.736 - 0.912 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]

There are 2153 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA