Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for brd3b

Gene Name Gene ID Reads Annotation
brd3b ENSDARG00000100129 6387 bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]










Genes with expression patterns similar to brd3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brd3b ENSDARG00000100129 6387 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
2. znf865 ENSDARG00000036698 15532 3.78 - - - 0.706 0.919 0.702 0.722 - 0.731 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
3. ssbp4 ENSDARG00000056483 10196 3.114 - - 0.812 - - 0.763 0.793 0.746 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
4. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 2.975 - 0.797 - - 0.760 0.709 - 0.709 - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
5. supt6h ENSDARG00000006524 3221 2.604 0.989 - - - 0.912 - 0.703 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
6. pno1 ENSDARG00000008502 4547 2.564 0.983 0.743 - - 0.838 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
7. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 2.547 - - 0.899 - 0.918 - - - 0.730 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
8. snrpf ENSDARG00000105037 10241 2.543 - 0.933 - - - 0.775 0.835 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
9. srgap1 srgap1 2320 2.458 - - - - 0.884 0.788 0.786 - -
10. srsf3b ENSDARG00000059360 14888 2.448 0.973 - - - 0.766 0.709 - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
11. sf3b2 ENSDARG00000018049 4675 2.435 0.859 - - - 0.860 - 0.716 - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
12. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.399 - - - - - 0.705 0.844 - 0.850 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
13. marcksa ENSDARG00000004049 2518 2.375 - - - - 0.890 0.759 - - 0.726 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
14. sdc3 3788 2.366 - - - - - 0.832 0.791 - 0.743 syndecan 3
15. snrpe ENSDARG00000033175 7462 2.365 - 0.703 - - - 0.839 0.823 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
16. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.361 - - - 0.741 0.907 - - - 0.713 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
17. khsrp ENSDARG00000026489 15738 2.351 - - - - - 0.716 0.821 - 0.814 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
18. pias4a ENSDARG00000007081 4264 2.343 - - - - 0.897 0.702 0.744 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
19. SERBP1 SERBP1 9276 2.313 - 0.770 - - - 0.776 0.767 - -
20. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 2.301 - 0.774 - - - - 0.700 - 0.827 thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
21. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.28 - - - - - 0.798 0.779 - 0.703 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
22. ezh2 ENSDARG00000010571 3273 2.268 - - - - - 0.821 0.729 - 0.718 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
23. smarca5 ENSDARG00000052348 15433 2.243 - - - - - 0.764 0.776 - 0.703 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
24. smarce1 ENSDARG00000016871 9628 2.236 - - - - - 0.728 0.764 0.744 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
25. uba1 ENSDARG00000037559 11579 2.234 - 0.724 - - - 0.710 0.800 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
26. bcl11ab ENSDARG00000063153 3032 2.206 - - - 0.704 - - 0.769 - 0.733 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
27. srsf4 ENSDARG00000105293 9657 2.184 - - - - 0.722 0.749 0.713 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
28. nxf1 ENSDARG00000055076 3251 1.894 0.989 - - - 0.905 - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
29. ddi2 ENSDARG00000006477 4190 1.878 0.976 - - - 0.902 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
30. naa15a ENSDARG00000003213 5889 1.849 0.984 - - - 0.865 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
31. ppp1cc 2361 1.838 0.986 - - - - 0.852 - - - protein phosphatase 1, catalytic subunit, gamma isozyme
32. h2afva ENSDARG00000068820 16427 1.825 0.961 - - - - - 0.864 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
33. anp32b ENSDARG00000023330 25013 1.819 0.955 - - - - - 0.864 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
34. nckap5l ENSDARG00000079148 4227 1.796 0.992 - - - - - 0.804 - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
35. pdlim5b ENSDARG00000027600 4252 1.784 0.986 - - - 0.798 - - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
36. ist1 ENSDARG00000051888 4536 1.779 0.960 - 0.819 - - - - - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
37. sf3b4 ENSDARG00000018574 7470 1.774 0.988 0.786 - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
38. myef2 ENSDARG00000059398 6050 1.766 0.978 - - - - - 0.788 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
39. FP245444.1 FP245444.1 1922 1.729 - - - - 0.894 0.835 - - -
40. sin3b ENSDARG00000062472 2025 1.716 - - - - 0.885 - 0.831 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
41. setb ENSDARG00000003920 21788 1.713 - - - - - 0.892 0.821 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
42. grina grina 4656 1.711 0.990 - - - - - 0.721 - -
43. acsbg2 ENSDARG00000004094 2445 1.707 0.985 - - - - 0.722 - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
44. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.706 - - - - 0.874 0.832 - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
45. psmb6 ENSDARG00000002240 8015 1.701 - 0.830 - - 0.871 - - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
46. hexim1 ENSDARG00000036482 4317 1.698 - - - - 0.898 - 0.800 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
47. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.693 - - - - - - 0.818 - 0.875 polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
48. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.686 0.964 0.722 - - - - - - - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
49. kdm1a ENSDARG00000060679 6152 1.684 - - - - 0.896 - 0.788 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
50. nol9 ENSDARG00000077751 2471 1.683 - 0.803 - - 0.880 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
51. fen1 ENSDARG00000011404 3358 1.68 - - - - 0.913 - 0.767 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
52. hbae1_1 37308 1.676 0.969 0.707 - - - - - - - hemoglobin, alpha embryonic 1
53. Sep-02 Sep-02 10074 1.676 0.972 - - - - - 0.704 - -
54. cltcb ENSDARG00000090716 5544 1.674 - - - - - 0.791 0.883 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
55. nfe2l3 ENSDARG00000019810 3682 1.673 - - - 0.817 - - - - 0.856 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
56. psma8 ENSDARG00000010965 8321 1.671 - 0.889 - - - - - - 0.782 proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
57. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.656 - - 0.900 - - - 0.756 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
58. dcaf7 ENSDARG00000054355 3517 1.656 - 0.813 - - - 0.843 - - - ddb1 and cul4 associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9511]
59. kif22 ENSDARG00000102624 3694 1.655 - - - - 0.876 - 0.779 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
60. sulf2 sulf2 1286 1.651 - - - - 0.874 0.777 - - -
61. ypel5 ENSDARG00000088929 1011 1.65 - - - - 0.869 - 0.781 - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
62. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.65 - - - - - - 0.905 - 0.745 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
63. nup50 ENSDARG00000017454 4425 1.65 - - - 0.726 0.924 - - - - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
64. prmt1 ENSDARG00000010246 11311 1.648 - 0.748 - - - - 0.900 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
65. clic4 ENSDARG00000022995 6064 1.644 - 0.885 - - - - - - 0.759 chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
66. si:dkey-19e4.5 ENSDARG00000089886 2562 1.64 - - - - - 0.800 0.840 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
67. ephb4a ENSDARG00000100725 1749 1.637 - - - - 0.868 - 0.769 - - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
68. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.636 - - - - - - 0.701 - 0.935 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
69. ddx39ab ENSDARG00000015111 11619 1.633 - - - - - 0.859 0.774 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
70. paxip1 ENSDARG00000005606 1417 1.629 - - - - 0.893 - 0.736 - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
71. h2afx ENSDARG00000029406 2116 1.623 - - - - 0.878 - 0.745 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
72. ppp2r1b ppp2r1b 3469 1.622 - 0.814 - - - - 0.808 - -
73. SNRPG ENSDARG00000099667 18697 1.621 0.882 0.739 - - - - - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
74. arglu1a ENSDARG00000019223 8716 1.621 0.862 - - - - - - - 0.759 arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
75. vbp1 ENSDARG00000030241 10619 1.621 - 0.758 - - 0.863 - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
76. pabpn1 ENSDARG00000045373 4876 1.621 - 0.874 - - - - 0.747 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
77. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.621 - - - - 0.909 0.712 - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
78. rbm8a ENSDARG00000016516 8789 1.62 - - - - 0.868 - 0.752 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
79. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.619 - - - - - - 0.780 - 0.839 immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
80. rfc1 ENSDARG00000054799 1416 1.619 - - - 0.732 0.887 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
81. apc ENSDARG00000058868 2605 1.617 - 0.732 - - 0.885 - - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
82. fscn1a ENSDARG00000059680 3999 1.616 - - - - - - 0.822 0.794 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
83. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.615 - - - - 0.891 - 0.724 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
84. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.614 - 0.755 - - - - - - 0.859 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
85. GABARAP GABARAP 8341 1.61 - - - - - - 0.740 - 0.870
86. pl10 pl10 10795 1.61 - 0.822 - - - - 0.788 - -
87. sarnp ENSDARG00000059357 4768 1.609 - 0.830 - - - 0.779 - - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
88. ywhaqb ENSDARG00000023323 28138 1.609 0.881 - - - - - - 0.728 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
89. C24H17orf96 C24H17orf96 1538 1.605 - - - - 0.904 - - - 0.701
90. stmn1a ENSDARG00000004169 21169 1.603 - - - - - - 0.795 - 0.808 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
91. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.603 - - - - 0.877 0.726 - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
92. cenpf ENSDARG00000055133 5267 1.602 - - - 0.723 0.879 - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
93. hmgb2b ENSDARG00000053990 11519 1.6 - - - - - - 0.866 - 0.734 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
94. znf292b ENSDARG00000043973 3791 1.597 - - - - - 0.891 0.706 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
95. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.596 - - - - 0.864 0.732 - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
96. scube2 ENSDARG00000037362 2833 1.594 - - - - 0.862 0.732 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
97. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.589 - 0.846 - - - - 0.743 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
98. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.586 - - - - 0.871 - 0.715 - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
99. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.584 - - - - 0.852 - 0.732 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
100. psmc5 ENSDARG00000015315 8458 1.584 - - - - 0.881 - - - 0.703 proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]

There are 1261 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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