Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for brd3a

Gene Name Gene ID Reads Annotation
brd3a ENSDARG00000006527 1636 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]










Genes with expression patterns similar to brd3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brd3a ENSDARG00000006527 1636 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
2. sumo3b ENSDARG00000035993 3414 3.969 0.897 - 0.708 0.784 - 0.759 - - 0.821 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
3. u2af2b ENSDARG00000011740 6946 2.363 - - - - - 0.775 - 0.743 0.845 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
4. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 2.265 - - - - - - 0.738 0.746 0.781 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
5. sin3b ENSDARG00000062472 2025 2.184 - - - - - 0.720 0.720 0.744 - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
6. usp49 ENSDARG00000000229 706 1.765 0.908 - - - - - - - 0.857 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
7. si:dkey-19e4.5 ENSDARG00000089886 2562 1.745 - - - - - - 0.949 - 0.796 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
8. syncripl ENSDARG00000026723 3889 1.745 0.915 - - - - - - - 0.830 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
9. derl1 ENSDARG00000021905 4698 1.731 - - - - - - 0.864 - 0.867 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
10. rwdd ENSDARG00000068256 964 1.73 0.874 - - - - - - - 0.856 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
11. pcnxl3 pcnxl3 756 1.721 0.919 - - - - - - - 0.802
12. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.721 - - - - - 0.824 - - 0.897 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
13. her15.2 her15.2 1701 1.717 0.902 - - - - - - - 0.815
14. znf207a ENSDARG00000015538 2630 1.695 0.903 - - - - - - - 0.792 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
15. spryd7a ENSDARG00000052624 1059 1.693 0.921 - - - - - - - 0.772 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
16. abca1a ENSDARG00000074635 1085 1.685 0.837 - - - - - - - 0.848 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
17. otud5a ENSDARG00000059006 2073 1.678 0.886 - - - - 0.792 - - - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
18. bahcc1 bahcc1 1934 1.667 - - - - - - 0.809 - 0.858
19. NUMA1_2 NUMA1_2 2897 1.662 - - - 0.806 - - - - 0.856
20. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.659 0.917 - - - - - - - 0.742 protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
21. CABZ01087568.1 CABZ01087568.1 1487 1.654 0.762 - - - - - - - 0.892
22. ZBTB16 ZBTB16 3385 1.653 0.914 - - - - - - - 0.739
23. polr2k ENSDARG00000075616 2047 1.652 0.881 - - - - - - - 0.771 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
24. lmnb1 ENSDARG00000044299 9817 1.649 0.824 - - - - - 0.825 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
25. kifc1 ENSDARG00000001558 6658 1.643 - - - - - 0.751 - - 0.892 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
26. pias4a ENSDARG00000007081 4264 1.637 - - - - - 0.791 0.846 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
27. bag6 ENSDARG00000075892 3782 1.631 0.877 - - - - - - - 0.754 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
28. kif15 ENSDARG00000012073 1936 1.627 - - - - - - 0.724 - 0.903 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
29. EIF1B ENSDARG00000029445 5034 1.617 0.753 - - - - - - - 0.864 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
30. ftsjd2 ftsjd2 2694 1.617 - - - 0.802 - - - - 0.815
31. map3k7 ENSDARG00000020469 2845 1.616 0.915 - - - - - 0.701 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
32. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 1.616 0.913 0.703 - - - - - - - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
33. otub1b ENSDARG00000011462 4329 1.616 - - - - - - 0.820 - 0.796 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
34. fam102bb ENSDARG00000002333 1483 1.616 - - - - - - 0.861 - 0.755 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
35. ss18 ENSDARG00000002970 2618 1.615 - - - - - 0.761 0.854 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
36. CCDC106 CCDC106 1908 1.613 - - - - - - 0.769 - 0.844
37. aqr ENSDARG00000016775 1581 1.61 - - - - - - 0.730 - 0.880 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
38. ncalda ENSDARG00000070688 5069 1.606 - - - - - - 0.831 - 0.775 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
39. prpf4bb ENSDARG00000040310 2260 1.601 - - - - - - 0.789 - 0.812 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
40. samm50l ENSDARG00000039681 2465 1.6 - - - - - - 0.818 - 0.782 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
41. nsd1a ENSDARG00000060016 2974 1.6 - - - - - 0.761 0.839 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
42. rerea ENSDARG00000077353 4162 1.598 0.842 - - - - - - - 0.756 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
43. RBM6 ENSDARG00000077060 3521 1.595 0.841 - - - - - - - 0.754 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
44. polr2gl ENSDARG00000056127 1771 1.594 - - - - - - 0.767 - 0.827 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
45. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 1.591 - 0.858 - - - - 0.733 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
46. gad2 ENSDARG00000015537 724 1.591 - - - 0.777 - - - - 0.814 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
47. mta2 ENSDARG00000013031 2932 1.591 - - - - - - - 0.845 0.746 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
48. lbr ENSDARG00000014013 4835 1.59 0.827 - - - - - 0.763 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
49. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.587 0.798 - - - - - - - 0.789 polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
50. cnot3a ENSDARG00000007135 3084 1.587 0.811 - - - - - - - 0.776 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
51. tom1 ENSDARG00000104581 1457 1.586 0.823 - - - - - - - 0.763 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
52. pfkfb4l pfkfb4l 2539 1.575 - - - - 0.772 - - - 0.803
53. CABZ01057907.1 CABZ01057907.1 1140 1.574 - - - - - - 0.736 - 0.838
54. ssb ENSDARG00000029252 3394 1.572 - 0.738 - - - - - - 0.834 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
55. ahsa1l ahsa1l 2366 1.568 0.755 - - - - - 0.813 - -
56. srek1ip1 ENSDARG00000043728 985 1.566 - - - - - - - 0.758 0.808 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
57. ltc4s ENSDARG00000062598 138 1.566 - 0.788 - - - - - - 0.778 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
58. sptlc2b ENSDARG00000074287 1853 1.565 0.768 - - - - - - - 0.797 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
59. rab11fip3 ENSDARG00000016490 661 1.558 - 0.743 - - - - - - 0.815 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
60. pl10 pl10 10795 1.554 - 0.754 - - - - 0.800 - -
61. rnf121 ENSDARG00000060282 1809 1.553 - - - - - - 0.734 - 0.819 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
62. CCDC88C ENSDARG00000053713 1026 1.553 - - - - - 0.708 - - 0.845 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
63. dut ENSDARG00000106529 3120 1.552 - - - - - - 0.758 - 0.794 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
64. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.551 - - - - - - - 0.707 0.844 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
65. DST ENSDARG00000101858 4395 1.55 0.757 - - - - - 0.793 - - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
66. taf5 ENSDARG00000018325 1363 1.549 - - - - - - 0.727 - 0.822 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
67. CYHR1 ENSDARG00000061057 2625 1.546 - 0.743 - - - - 0.803 - - cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
68. rbm42 ENSDARG00000039910 1111 1.546 - - - 0.718 - - - - 0.828 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
69. MZT1 ENSDARG00000096668 2514 1.544 - - - - - - 0.806 - 0.738 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
70. metrnl 1042 1.544 - - - 0.716 - - - - 0.828 meteorin, glial cell differentiation regulator-like
71. mrpl3 ENSDARG00000103318 2308 1.538 - - - - - - 0.749 - 0.789 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
72. brd2a ENSDARG00000022280 3481 1.534 - - - - - 0.749 - - 0.785 bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
73. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 1.533 - - - - - - 0.806 0.727 - polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
74. mllt4 mllt4 2939 1.532 0.802 - - - - - - - 0.730
75. nop10 ENSDARG00000104227 2463 1.53 0.824 - - - - - 0.706 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
76. wnk1b ENSDARG00000039392 3587 1.529 0.826 0.703 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
77. llgl1 ENSDARG00000009693 4205 1.527 0.789 - - - - - - - 0.738 lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
78. psma6a ENSDARG00000019398 2702 1.526 0.799 - - - - - 0.727 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
79. rgs3b ENSDARG00000035132 876 1.524 0.816 - - - - - 0.708 - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
80. lsm1 ENSDARG00000043177 767 1.521 - - - - - - - 0.718 0.803 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
81. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.521 0.780 0.741 - - - - - - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
82. tmpob ENSDARG00000022978 8121 1.517 - - 0.757 - - - 0.760 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
83. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.516 - - - - - 0.731 0.785 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
84. ppm1g ENSDARG00000075559 6516 1.515 - 0.747 - - - 0.768 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
85. cndp2 ENSDARG00000003931 1177 1.507 0.795 0.712 - - - - - - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
86. rxrgb ENSDARG00000004697 332 1.506 - 0.724 - - - - - - 0.782 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
87. h2afva ENSDARG00000068820 16427 1.503 - - - - - 0.744 0.759 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
88. pus7 ENSDARG00000031774 195 1.496 - 0.704 - - - - - - 0.792 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
89. memo1 ENSDARG00000010823 1681 1.496 - - - - - - 0.712 - 0.784 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
90. srebf1 ENSDARG00000067607 1537 1.494 - - - - - - 0.754 - 0.740 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
91. fgfr1a ENSDARG00000011027 2705 1.493 - - - - - - 0.701 - 0.792 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
92. pvrl1b 1645 1.492 - - - - - - 0.707 - 0.785 poliovirus receptor-related 1b
93. chd7 ENSDARG00000075211 12085 1.492 - - - - - 0.788 - 0.704 - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
94. sh2d3ca ENSDARG00000028099 1037 1.49 - - 0.706 - - - 0.784 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
95. sarnp ENSDARG00000059357 4768 1.489 - - - - - - 0.728 - 0.761 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
96. MKI67 ENSDARG00000091150 11038 1.488 - - - - - 0.753 - - 0.735 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
97. LEPROTL1 ENSDARG00000104871 3019 1.487 - - - - - - 0.710 - 0.777 leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
98. foxo3a ENSDARG00000023058 2554 1.484 - - 0.772 - - - 0.712 - - forkhead box O3A [Source:ZFIN;Acc:ZDB-GENE-050116-1]
99. snrnp70 ENSDARG00000077126 5921 1.483 0.772 - - - - - - - 0.711 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
100. si:dkey-260j18.2 ENSDARG00000101942 450 1.481 - 0.779 - - - 0.702 - - - si:dkey-260j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3956]

There are 1480 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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