Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for brd1b

Gene Name Gene ID Reads Annotation
brd1b ENSDARG00000051798 1712 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]










Genes with expression patterns similar to brd1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brd1b ENSDARG00000051798 1712 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
2. pvrl1b 1645 2.655 - 0.821 - - - 0.872 - 0.962 - poliovirus receptor-related 1b
3. h1fx ENSDARG00000054058 4075 2.493 - 0.836 - - - 0.735 - 0.922 - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
4. PRSS23 ENSDARG00000055786 564 2.463 - 0.761 - 0.809 - 0.893 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
5. srrt ENSDARG00000017762, ENSDARG00000114824 2158 2.344 - 0.763 - - - - 0.758 - 0.823 serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
6. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 2.309 - - - 0.776 - 0.828 - - 0.705 ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
7. brd4 ENSDARG00000078904 5367 2.284 - - - 0.724 - 0.766 0.794 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
8. serinc1 ENSDARG00000009106 10571 2.281 - 0.753 - 0.774 - - - - 0.754 serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
9. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.884 - - - - - 0.905 - 0.979 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
10. zgc:101569 ENSDARG00000038876 1525 1.871 - - - - - 0.908 - 0.963 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
11. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.868 - 0.883 - - - - - 0.985 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
12. sra1 ENSDARG00000053619 2799 1.866 - - - - - 0.918 - 0.948 - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
13. NFATC3 NFATC3 1712 1.833 - - - - - 0.861 - 0.972 -
14. ylpm1 ENSDARG00000043680 7676 1.82 - 0.866 - - - - - 0.954 - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
15. slc25a42 ENSDARG00000099368 2420 1.811 - - - - - 0.834 - 0.977 - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
16. frmd6 ENSDARG00000002332 2698 1.788 - - - - - 0.810 - 0.978 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
17. snap29 ENSDARG00000038518 1609 1.784 - - - - - 0.806 - 0.978 - synaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
18. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 1.774 - 0.841 - - - 0.933 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
19. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.772 - 0.898 - - - - - - 0.874 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
20. cdkn2c ENSDARG00000057610 179 1.768 - 0.847 - - - 0.921 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
21. ppp2r1b ppp2r1b 3469 1.758 - 0.785 - - - - - 0.973 -
22. atl3 ENSDARG00000004270 2806 1.754 - - - - - 0.818 - 0.936 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
23. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 1.754 - - - 0.934 - 0.820 - - - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
24. rhot2 ENSDARG00000056328 1123 1.753 - - - 0.877 - 0.876 - - - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
25. CABZ01005777.1 CABZ01005777.1 505 1.744 - - - 0.877 - 0.867 - - -
26. nucb1 ENSDARG00000054833 2009 1.743 - 0.794 - - - - - 0.949 - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
27. gtf2f2a ENSDARG00000069910 1027 1.743 - 0.938 - - - 0.805 - - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
28. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.734 - - - - - 0.768 - 0.966 - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
29. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.726 - 0.741 - - - - - 0.985 - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
30. tmem101 ENSDARG00000114508 494 1.724 - - - 0.811 - 0.913 - - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
31. CEP350 ENSDARG00000058000 2887 1.724 - 0.769 - - - - - 0.955 - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
32. piezo1 ENSDARG00000076870 4704 1.717 - 0.826 - - - - - 0.891 - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
33. ldb1a ENSDARG00000010137 3035 1.717 - 0.866 - - - - - - 0.851 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
34. RPRD1A ENSDARG00000104861 2560 1.714 - - - - - - 0.738 0.976 - regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
35. kmt2e ENSDARG00000007523 1851 1.712 - 0.805 - - - 0.907 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
36. pop5 ENSDARG00000053452 1347 1.711 - 0.934 - - - 0.777 - - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
37. pik3r4 ENSDARG00000060469 381 1.709 - 0.907 - 0.802 - - - - - phosphoinositide-3-kinase, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050309-84]
38. fam89a ENSDARG00000079979 4375 1.707 - - - - - - 0.755 0.952 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
39. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.702 - - - - - 0.886 - - 0.816 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
40. ZNF281 ZNF281 1946 1.697 - 0.916 - - - 0.781 - - -
41. ppdpfa ENSDARG00000007682 3214 1.691 - - - - - - 0.739 0.952 - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
42. tgm1 ENSDARG00000017799 442 1.689 - 0.822 - - - 0.867 - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
43. si:dkey-27i16.3 si:dkey-27i16.3 494 1.683 - 0.808 - - - 0.875 - - -
44. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.682 - 0.813 - - - 0.869 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
45. fkbp2 ENSDARG00000044540 1615 1.68 - - - 0.806 - 0.874 - - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
46. fermt1 ENSDARG00000052652 2394 1.68 - 0.728 - - - - - 0.952 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
47. ankrd12 ENSDARG00000052419 2579 1.675 - 0.834 - - - - - - 0.841 ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
48. safb ENSDARG00000020467 5608 1.673 - - - - - 0.857 - - 0.816 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
49. hcls1 ENSDARG00000012729 1547 1.67 - - - 0.709 - - - 0.961 - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
50. GPR161 ENSDARG00000055659 1067 1.664 - - - - - 0.908 - - 0.756 G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
51. gpx7 ENSDARG00000091511 3045 1.664 - - - - - 0.816 - 0.848 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
52. arid1aa ENSDARG00000101710 3644 1.66 - 0.889 - - - - - - 0.771 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
53. mxd3 ENSDARG00000098350 3040 1.655 - - - - - 0.870 - - 0.785 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
54. lsm14aa ENSDARG00000006600 2298 1.654 - - - 0.791 - 0.863 - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
55. tacc3 ENSDARG00000005454 2305 1.653 - - - - - 0.941 - - 0.712 transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
56. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.652 - - - - - 0.786 - 0.866 - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
57. pdk1 ENSDARG00000013128 526 1.652 - 0.864 - 0.788 - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
58. ccnb1 ENSDARG00000051923 3226 1.649 - 0.766 - - - 0.883 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
59. bambib ENSDARG00000099677 4267 1.646 - - - - - - 0.702 0.944 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
60. smg7 ENSDARG00000060767 2759 1.644 - - - - - 0.922 - - 0.722 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
61. TMEM184B TMEM184B 1280 1.643 - - - 0.773 - 0.870 - - -
62. higd2a ENSDARG00000052371 7354 1.643 - - - - - - 0.705 0.938 - HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
63. zbtb18 ENSDARG00000028228 3653 1.642 - 0.824 - - - - - - 0.818 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
64. ddost ENSDARG00000037318 10904 1.639 - - - - - 0.768 - 0.871 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
65. mdm4 ENSDARG00000057513 1954 1.636 - 0.865 - - - 0.771 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
66. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.636 - - - 0.753 - 0.883 - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
67. tet3 ENSDARG00000062646 6672 1.634 - 0.788 - - - 0.846 - - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
68. s100v1 ENSDARG00000070427 6633 1.632 - - - - - 0.823 - 0.809 - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
69. GPR31 431 1.63 - - - - - 0.883 0.747 - - G protein-coupled receptor 31
70. s100z ENSDARG00000038729 442 1.628 - - - 0.830 - 0.798 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
71. smg1 ENSDARG00000054570, ENSDARG00000116568 1271 1.627 - 0.747 - - - 0.880 - - - SMG1 phosphatidylinositol 3-kinase-related kinase [Source:ZFIN;Acc:ZDB-GENE-061013-767]
72. ZBTB16 ZBTB16 3385 1.625 - 0.897 - - - - 0.728 - -
73. cdc20 ENSDARG00000100741 3264 1.624 - - - - - 0.881 0.743 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
74. xrcc1 ENSDARG00000009494 1346 1.623 - - - - - 0.900 - - 0.723 X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
75. hint2 ENSDARG00000100938 1053 1.623 - 0.885 - 0.738 - - - - - histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
76. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.621 - 0.733 - - - 0.888 - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
77. tmem50a ENSDARG00000015757 3244 1.621 - - - - - 0.911 0.710 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
78. SEC24B ENSDARG00000071906 1018 1.62 - - - - - 0.898 0.722 - - SEC24 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6565]
79. SNRPG ENSDARG00000099667 18697 1.62 - - - - - - - 0.851 0.769 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
80. CACHD1 ENSDARG00000061590 1287 1.618 - - 0.728 - - 0.890 - - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
81. arhgap29b ENSDARG00000017748 812 1.618 0.702 - - - - 0.916 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
82. eif2s1a ENSDARG00000005827 5992 1.616 - - - - - 0.802 - - 0.814 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
83. FAM171A2 FAM171A2 707 1.614 - - - - - 0.887 - - 0.727
84. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.613 - - 0.766 - - - - - 0.847 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
85. psat1 ENSDARG00000016733 8084 1.61 - 0.873 - - - - 0.737 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
86. nrm ENSDARG00000063690 1371 1.608 - 0.750 - - - 0.858 - - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
87. gid8b ENSDARG00000037589 2121 1.606 - - - 0.709 - 0.897 - - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
88. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.604 - - - 0.807 - 0.797 - - - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
89. bcas2 ENSDARG00000043631 1971 1.6 - - - - - 0.867 - - 0.733 BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
90. dvl2 ENSDARG00000056184 1525 1.599 - - - - - 0.881 - - 0.718 dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
91. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.598 - - - - - 0.838 - - 0.760 ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
92. prdm4 ENSDARG00000017366 454 1.596 - - - 0.718 - 0.878 - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
93. psmb6 ENSDARG00000002240 8015 1.592 - 0.709 - - - 0.883 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
94. clasp1a ENSDARG00000010280 1158 1.591 - - - 0.856 - - - - 0.735 cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
95. si:ch211-198b3.1 si:ch211-198b3.1 765 1.59 - 0.886 - - - 0.704 - - -
96. map3k7 ENSDARG00000020469 2845 1.59 - 0.847 - - - - 0.743 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
97. dhrs13a.2 ENSDARG00000111240 491 1.589 - 0.713 - - - 0.876 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
98. psmd3 ENSDARG00000018124 540 1.586 - - - 0.810 - - 0.776 - - proteasome 26S subunit, non-ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1444]
99. golga7ba ENSDARG00000036295 1460 1.585 - - - - - 0.799 - - 0.786 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
100. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.584 - - - - - 0.826 - - 0.758 histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]

There are 2003 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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