Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for brca2

Gene Name Gene ID Reads Annotation
brca2 ENSDARG00000079015 410 breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]










Genes with expression patterns similar to brca2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brca2 ENSDARG00000079015 410 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
2. znf259 znf259 1819 1.865 - 0.992 - - - - - 0.873 -
3. pigp ENSDARG00000038805 611 1.838 - 0.999 - - - - - 0.839 - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
4. ppp2r2ba 321 1.803 0.901 - - - - - - 0.902 - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
5. si:ch211-13f8.1 ENSDARG00000093342 274 1.774 - 1.000 - - - 0.774 - - - si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
6. lsm1 ENSDARG00000043177 767 1.739 - 1.000 0.739 - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
7. si:dkey-11c5.11 ENSDARG00000096637 130 1.726 - - - - - - 0.818 0.908 - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
8. rabl6 rabl6 489 1.722 - - - - - - 0.807 0.915 -
9. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 1.711 - - - - - 0.774 - 0.937 - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
10. ogfr ENSDARG00000037837 1001 1.708 0.708 1.000 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
11. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.656 - - - - - - 0.710 0.946 - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
12. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 1.653 - - 0.712 - - - - 0.941 - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
13. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.61 - - - - - - 0.793 0.817 - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
14. CU856207.1 CU856207.1 87 1.571 - - - - - - 0.716 0.855 -
15. rbp4l ENSDARG00000044684 3292 1.567 - 0.701 - - - - - 0.866 - retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
16. zgc:173770 ENSDARG00000076476 34 1.553 - - - - - 0.773 0.780 - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
17. plcd3a ENSDARG00000052957 467 1.54 - - - - - - 0.719 0.821 - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
18. rab38a rab38a 1094 1.527 0.739 - - - - - 0.788 - -
19. fat3a ENSDARG00000033840 902 1.503 0.757 - - - - 0.746 - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
20. kcnab2b ENSDARG00000062134 80 1.499 - - - - - 0.744 0.755 - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
21. prdm10 ENSDARG00000104251 510 1.487 0.737 - - - - - - 0.750 - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
22. dzip1l ENSDARG00000074265 61 1.484 - - - - - 0.732 0.752 - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
23. plekhj1 ENSDARG00000025593 696 1.477 0.741 - - - - - 0.736 - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
24. mthfsd ENSDARG00000062042 34 1.465 0.762 - - - - 0.703 - - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
25. CABZ01027547.1 CABZ01027547.1 128 1.456 - - 0.704 - - 0.752 - - -
26. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1.435 - - - - - 0.703 0.732 - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
27. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1.421 - - - - - 0.703 0.718 - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
28. hoxa5a ENSDARG00000102501 1667 1 - 1.000 - - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
29. hic1 ENSDARG00000055493 219 1 - 1.000 - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
30. SFT2D2_1 SFT2D2_1 219 1 - 1.000 - - - - - - -
31. lbx1a ENSDARG00000018321 634 1 - 1.000 - - - - - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
32. zgc:110191 zgc:110191 359 1 - 1.000 - - - - - - -
33. rarga ENSDARG00000034117 1238 1 - 1.000 - - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
34. uqcrfs1 ENSDARG00000007745 4654 1 - 1.000 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
35. recql ENSDARG00000007175 501 1 - 1.000 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
36. ms4a17a.7 ENSDARG00000043796 352 1 - 1.000 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
37. crabp2a ENSDARG00000073978 868 1 - 1.000 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
38. sema3gb ENSDARG00000013607 1531 1 - 1.000 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
39. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1 - 1.000 - - - - - - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
40. si:ch211-251b21.1 ENSDARG00000007275 15724 1 - 1.000 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
41. CABZ01061717.1 CABZ01061717.1 320 1 - 1.000 - - - - - - -
42. prkcea ENSDARG00000003008 1118 1 - 1.000 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
43. RMDN2 ENSDARG00000078761 717 1 - 1.000 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
44. glo1 ENSDARG00000068978 1384 1 - 1.000 - - - - - - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
45. naa15b ENSDARG00000030368 535 0.999 - 0.999 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
46. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.999 - 0.999 - - - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
47. ergic2 ENSDARG00000051936, ENSDARG00000111918 798 0.999 - 0.999 - - - - - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
48. capn1a ENSDARG00000052702 1123 0.999 - 0.999 - - - - - - - calpain 1, (mu/I) large subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-1263]
49. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.999 - 0.999 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
50. plp1a ENSDARG00000103732 3544 0.999 - 0.999 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
51. tert ENSDARG00000042637 463 0.999 - 0.999 - - - - - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
52. rab8b ENSDARG00000068628, ENSDARG00000111270, ENSDARG00000114110 607 0.999 - 0.999 - - - - - - - RAB8B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070620-16]
53. cnot11 ENSDARG00000068596 829 0.999 - 0.999 - - - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
54. si:ch211-87l2.1 si:ch211-87l2.1 2403 0.999 - 0.999 - - - - - - -
55. znf740 znf740 2458 0.999 - 0.999 - - - - - - -
56. klhl20 ENSDARG00000038801 936 0.999 - 0.999 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
57. stim1a ENSDARG00000060723 1200 0.999 - 0.999 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
58. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.999 - 0.999 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
59. cnn3b ENSDARG00000029856 4807 0.999 - 0.999 - - - - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
60. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.999 - 0.999 - - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
61. zgc:77158 ENSDARG00000013784 634 0.999 - 0.999 - - - - - - - zgc:77158 [Source:ZFIN;Acc:ZDB-GENE-040426-1799]
62. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 0.998 - 0.998 - - - - - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
63. myo9al1 myo9al1 1194 0.998 - 0.998 - - - - - - -
64. cdipt ENSDARG00000070686 1318 0.998 - 0.998 - - - - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
65. cylda ENSDARG00000060058 768 0.998 - 0.998 - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
66. PPFIBP1_1 PPFIBP1_1 2256 0.998 - 0.998 - - - - - - -
67. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.998 - 0.998 - - - - - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
68. ddr2l ENSDARG00000103830 1921 0.997 - 0.997 - - - - - - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
69. lix1l ENSDARG00000063244 2061 0.997 - 0.997 - - - - - - - limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
70. PRKAG2 PRKAG2 688 0.997 - 0.997 - - - - - - -
71. ap2b1 ENSDARG00000035152 2912 0.997 - 0.997 - - - - - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
72. fam192a ENSDARG00000041631 4113 0.997 - 0.997 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
73. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.997 - 0.997 - - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
74. mmp11b ENSDARG00000016718 1136 0.996 - 0.996 - - - - - - - matrix metallopeptidase 11b [Source:ZFIN;Acc:ZDB-GENE-070817-2]
75. ccng2 ENSDARG00000017602 3141 0.996 - 0.996 - - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
76. calm2b 3890 0.996 - 0.996 - - - - - - - calmodulin 2b, (phosphorylase kinase, delta)
77. agtpbp1 ENSDARG00000105214 1038 0.996 - 0.996 - - - - - - - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
78. cenpe ENSDARG00000063385 4428 0.996 - 0.996 - - - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
79. ddx6 ENSDARG00000061338 2514 0.996 - 0.996 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
80. tmem181 ENSDARG00000045910 2288 0.996 - 0.996 - - - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
81. ZNF70_11 ZNF70_11 1246 0.996 - 0.996 - - - - - - -
82. axin1 ENSDARG00000102964 1710 0.995 - 0.995 - - - - - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
83. arf6a ENSDARG00000101626 2959 0.995 - 0.995 - - - - - - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
84. plagx ENSDARG00000036855 3768 0.995 - 0.995 - - - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
85. abcb7 ENSDARG00000062795 1404 0.995 - 0.995 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
86. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 0.994 - 0.994 - - - - - - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
87. AKAP2 AKAP2 4178 0.994 - 0.994 - - - - - - -
88. tfe3a ENSDARG00000098903 1530 0.994 - 0.994 - - - - - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
89. FAM195A FAM195A 1134 0.994 - 0.994 - - - - - - -
90. mrp63 mrp63 2500 0.993 - 0.993 - - - - - - -
91. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 0.993 - 0.993 - - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
92. hoxc3a ENSDARG00000070339 3379 0.993 - 0.993 - - - - - - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
93. dido1 ENSDARG00000057940 3819 0.992 - 0.992 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
94. serpinh1b ENSDARG00000019949 11693 0.992 - 0.992 - - - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
95. fam133b ENSDARG00000013863 5070 0.992 - 0.992 - - - - - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
96. col4a1 ENSDARG00000055009 3083 0.992 - 0.992 - - - - - - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
97. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.992 - 0.992 - - - - - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
98. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 0.99 - 0.990 - - - - - - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
99. eif5 ENSDARG00000003681 7986 0.989 - 0.989 - - - - - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
100. MAF1 ENSDARG00000013122 6899 0.989 - 0.989 - - - - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]

There are 1233 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA