Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for brat1

Gene Name Gene ID Reads Annotation
brat1 ENSDARG00000062585 1 BRCA1-associated ATM activator 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6989]










Genes with expression patterns similar to brat1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. brat1 ENSDARG00000062585 1 2 - - - - - - - 1.000 1.000 BRCA1-associated ATM activator 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6989]
2. zgc:153116 ENSDARG00000077205 7 1 - - - - - - - - 1.000 zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
3. TOR4A_1 TOR4A_1 20 1 - - - - - - - 1.000 -
4. zgc:163047 zgc:163047 5 1 - - - - - - - - 1.000
5. rxfp2l ENSDARG00000068731 0 1 - - - - - - - 1.000 - relaxin family peptide receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-060531-8]
6. CR382383.3 CR382383.3 2 1 - - - - - - - 1.000 -
7. TMEM220 ENSDARG00000088981 28 1 - - - - - - - 1.000 - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
8. DDO_1 DDO_1 5 1 - - - - - - - 1.000 -
9. si:ch211-42d10.5 si:ch211-42d10.5 17 1 - - - - - - - 1.000 -
10. BX936386.1 ENSDARG00000097166 5 1 - - - - - - - 1.000 -
11. grk1b ENSDARG00000104685 3 1 - - - - - - - - 1.000 G protein-coupled receptor kinase 1 b [Source:ZFIN;Acc:ZDB-GENE-050417-211]
12. syt15 ENSDARG00000079926 8 1 - - - - - - - 1.000 - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
13. SIGLEC15 SIGLEC15 10 1 - - - - - - - 1.000 -
14. VAV1 VAV1 0 1 - - - - - - - 1.000 -
15. BRINP3 BRINP3 11 1 - - - - - - - 1.000 -
16. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - - - - 1.000 -
17. si:dkey-222e15.4 10 1 - - - - - - - 1.000 - si:dkey-222e15.4, transcript variant X4
18. FP102191.1 FP102191.1 21 1 - - - - - - - 1.000 -
19. PCDHAC2 PCDHAC2 2 1 - - - - - - - - 1.000
20. porcnl ENSDARG00000052455 29 1 - - - - - - - - 1.000 porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
21. si:dkey-20i20.4 ENSDARG00000110106 1 1 - - - - - - - - 1.000 si:dkey-20i20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-717]
22. CABZ01113899.1 CABZ01113899.1 11 1 - - - - - - - - 1.000
23. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - - - - 1.000 -
24. NXPH4 11 1 - - - - - - - 1.000 - neurexophilin 4
25. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - 1.000 -
26. CR847844.3 CR847844.3 1 1 - - - - - - - 1.000 -
27. or115-8 ENSDARG00000092406 1 1 - - - - - - - 1.000 - odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
28. josd1 ENSDARG00000071548, ENSDARG00000113255, ENSDARG00000115146 4 1 - - - - - - - 1.000 - Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]
29. PLCXD2 ENSDARG00000058200 8 1 - - - - - - - 1.000 - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
30. BX572619.4 BX572619.4 10 1 - - - - - - - 1.000 -
31. BX324003.3 BX324003.3 1 1 - - - - - - - - 1.000
32. syt1b ENSDARG00000042350, ENSDARG00000112484 0 1 - - - - - - - 1.000 - synaptotagmin Ib [Source:ZFIN;Acc:ZDB-GENE-060503-166]
33. U1_22 U1_22 0 1 - - - - - - - 1.000 -
34. CABZ01085177.1 ENSDARG00000104644 6 1 - - - - - - - - 1.000 transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
35. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - - - - - - - 1.000 - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
36. olig1 ENSDARG00000040948 1 1 - - - - - - - 1.000 - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
37. CR792453.1 ENSDARG00000095699 4 1 - - - - - - - 1.000 -
38. FP016207.1 FP016207.1 3 1 - - - - - - - - 1.000
39. gucy2f ENSDARG00000025504 6 1 - - - - - - - - 1.000 guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
40. CR762436.3 CR762436.3 1 1 - - - - - - - - 1.000
41. pmch ENSDARG00000073959 1 1 - - - - - - - - 1.000 pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
42. tcf4 0 1 - - - - - - - 1.000 - transcription factor 4
43. htr2b ENSDARG00000115925 0 1 - - - - - - - 1.000 - 5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled [Source:ZFIN;Acc:ZDB-GENE-081022-57]
44. zgc:172244 zgc:172244 4 1 - - - - - - - - 1.000
45. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - - - - - - - 1.000 zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
46. tmem43 2 1 - - - - - - - - 1.000 transmembrane protein 43
47. CR936967.1 CR936967.1 2 1 - - - - - - - 1.000 -
48. ZBED1_5 ZBED1_5 1 1 - - - - - - - 1.000 -
49. BX088562.1 ENSDARG00000089255 3 1 - - - - - - - - 1.000 si:ch211-286c4.6 [Source:NCBI gene;Acc:100003678]
50. guca1a ENSDARG00000010454 9 1 - - - - - - - - 1.000 guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
51. SVEP1 ENSDARG00000013526 16 1 - - - - - - - 1.000 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
52. si:ch73-334d15.4 ENSDARG00000056502 0 1 - - - - - - - 1.000 - si:ch73-334d15.4 [Source:ZFIN;Acc:ZDB-GENE-091204-184]
53. arhgap23b ENSDARG00000026840 6 1 - - - - - - - - 1.000 Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
54. CABZ01081747.1 ENSDARG00000098362 1 1 - - - - - - - 1.000 - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:100330321]
55. si:ch211-188i4.4 5 1 - - - - - - - 1.000 - si:ch211-188i4.4, transcript variant X3
56. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - - - - - 1.000 - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
57. sinup ENSDARG00000017163 5 1 - - - - - - - 1.000 - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
58. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - - - 1.000 - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
59. SDSL ENSDARG00000074698 34 1 - - - - - - - - 1.000 serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
60. si:dkey-273g3.2 si:dkey-273g3.2 2 1 - - - - - - - 1.000 -
61. CMA1_6 CMA1_6 2 1 - - - - - - - 1.000 -
62. SEMA6B SEMA6B 35 1 - - - - - - - 1.000 -
63. rbbp9 ENSDARG00000040713 12 1 - - - - - - - 1.000 - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
64. CU207301.11 CU207301.11 1 1 - - - - - - - 1.000 -
65. sts ENSDARG00000053241 10 1 - - - - - - - 1.000 - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
66. lipt2 ENSDARG00000069852 14 1 - - - - - - - 1.000 - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
67. grem1a ENSDARG00000029546, ENSDARG00000090720 1 1 - - - - - - - 1.000 - gremlin 1a, DAN family BMP antagonist [Source:ZFIN;Acc:ZDB-GENE-040625-1]
68. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - - - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
69. BX511189.1 BX511189.1 34 1 - - - - - - - - 1.000
70. BX897747.3 BX897747.3 0 1 - - - - - - - 1.000 -
71. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - 1.000 - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
72. CR925773.1 ENSDARG00000086266 0 1 - - - - - - - 1.000 - caspase-3-like [Source:NCBI gene;Acc:798445]
73. fam207a_1 ENSDARG00000071500 1 1 - - - - - - - 1.000 - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
74. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - - - 1.000 -
75. si:zfos-1762d12.1 si:zfos-1762d12.1 5 1 - - - - - - - 1.000 -
76. CR848664.1 CR848664.1 12 1 - - - - - - - 1.000 -
77. lrch4 ENSDARG00000068258 24 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
78. CABZ01117977.1 CABZ01117977.1 9 1 - - - - - - - - 1.000
79. HIST1H4J_2 HIST1H4J_2 12 1 - - - - - - - - 1.000
80. CABZ01049058.1 CABZ01049058.1 7 1 - - - - - - - 1.000 -
81. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - - - 1.000 -
82. CR352328.3 CR352328.3 9 1 - - - - - - - 1.000 -
83. si:ch73-77n15.2 si:ch73-77n15.2 0 1 - - - - - - - 1.000 -
84. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - - - - - 1.000 -
85. lhfpl5a ENSDARG00000045023 2 1 - - - - - - - 1.000 - LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
86. cmpk2 ENSDARG00000031359 1 1 - - - - - - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
87. tmprss4b ENSDARG00000012860 6 1 - - - - - - - 1.000 - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
88. si:ch211-173b9.5 si:ch211-173b9.5 2 1 - - - - - - - - 1.000
89. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - - - - - - - 1.000
90. SBSPON ENSDARG00000110160 2 1 - - - - - - - 1.000 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
91. gc3 31 1 - - - - - - - - 1.000 guanylyl cyclase 3, transcript variant X2
92. coch ENSDARG00000024032 7 1 - - - - - - - 1.000 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
93. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - - - - 1.000 - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
94. fem1a ENSDARG00000067966 11 1 - - - - - - - 1.000 - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
95. CR848763.1 CR848763.1 9 1 - - - - - - - - 1.000
96. GALNT8_1 GALNT8_1 10 1 - - - - - - - 1.000 -
97. eif3bb ENSDARG00000074213 2 1 - - - - - - - 1.000 - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
98. MPP7 MPP7 9 1 - - - - - - - 1.000 -
99. BX470083.4 ENSDARG00000115059 8 1 - - - - - - - 1.000 -
100. tgm1l2 ENSDARG00000101595 0 1 - - - - - - - 1.000 - transglutaminase 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-110408-37]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA