Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bnip3la

Gene Name Gene ID Reads Annotation
bnip3la ENSDARG00000025468 3097 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]










Genes with expression patterns similar to bnip3la

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bnip3la ENSDARG00000025468 3097 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
2. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.606 - - - - - 0.838 - 0.935 0.833 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
3. sumo3b ENSDARG00000035993 3414 2.441 - 0.801 - - - - - 0.829 0.811 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
4. gorasp2 ENSDARG00000015126 3923 2.34 0.798 0.820 - - - - 0.722 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
5. kifc1 ENSDARG00000001558 6658 2.278 0.757 - - - - 0.711 - - 0.810 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
6. eif3s10 ENSDARG00000076815 10822 2.259 - - - - - 0.713 - 0.810 0.736 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
7. wif1 ENSDARG00000005541 1689 2.218 - 0.725 - - - - 0.761 - 0.732 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
8. cwc22 ENSDARG00000014008 2385 1.708 - - - - - - - 0.943 0.765 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
9. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.704 - 0.875 - - - - 0.829 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
10. ptges3b_1 ENSDARG00000089626 1670 1.696 - - - - - - - 0.930 0.766 prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
11. arid4a ENSDARG00000043873 4176 1.671 - - - - - 0.879 - - 0.792 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
12. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.67 - - - 0.758 - - - 0.912 - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
13. supt16h ENSDARG00000079949 4755 1.654 0.835 - - - - - - - 0.819 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
14. dhdds ENSDARG00000039851 1135 1.64 - - - - - - - 0.935 0.705 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
15. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.635 - 0.799 - - - - - - 0.836 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
16. CABZ01013938.1 CABZ01013938.1 4497 1.634 - - - - - - 0.776 0.858 -
17. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.62 - 0.890 - - - - 0.730 - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
18. carm1 ENSDARG00000018698 5599 1.614 - - - - - - - 0.848 0.766 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
19. cnot3a ENSDARG00000007135 3084 1.614 - - - - - 0.792 - - 0.822 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
20. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 1.609 - - - - - 0.815 - - 0.794 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
21. plcg1 ENSDARG00000038442 5324 1.597 - 0.798 - - - - - - 0.799 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
22. u2af2b ENSDARG00000011740 6946 1.588 - - - - - 0.826 - - 0.762 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
23. ppm1da ENSDARG00000009273 7713 1.586 - - - - - 0.803 - - 0.783 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
24. usp7 ENSDARG00000073710 7017 1.582 - - - - - - 0.704 0.878 - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
25. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.578 0.832 - - - - - - - 0.746 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
26. hgs ENSDARG00000020960 3574 1.577 - - - - - - 0.748 - 0.829 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
27. pabpn1 ENSDARG00000045373 4876 1.574 - 0.768 - - - - - - 0.806 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
28. serinc1 ENSDARG00000009106 10571 1.573 - 0.848 - 0.725 - - - - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
29. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.572 0.831 - - - - - - - 0.741 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
30. TNPO2 ENSDARG00000042887 2290 1.569 - 0.719 - - - - - - 0.850 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
31. sarnp ENSDARG00000059357 4768 1.567 - 0.807 - - - - - - 0.760 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
32. nt5c2b ENSDARG00000058231 3822 1.567 - - - - - - 0.820 - 0.747 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
33. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.567 - - - - - 0.730 0.837 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
34. thrap3b ENSDARG00000098228 4396 1.565 - 0.724 - - - 0.841 - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
35. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.56 - 0.753 - - - - 0.807 - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
36. flot2a ENSDARG00000004830 5276 1.56 0.781 - - - - - 0.779 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
37. cul3a ENSDARG00000038967 6155 1.559 - - - - - - - 0.755 0.804 cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
38. cwc25 ENSDARG00000003382 2134 1.559 0.745 - - - - - - - 0.814 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
39. arhgef4 ENSDARG00000012914 1464 1.556 - - - - - 0.777 - - 0.779 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
40. rbbp6 ENSDARG00000037919 4813 1.551 0.769 - - - - - - - 0.782 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
41. zgc:174906 ENSDARG00000075314 2187 1.55 0.835 - - - - 0.715 - - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
42. smn1 ENSDARG00000018494 1024 1.549 - 0.793 - - - - 0.756 - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
43. ipo7 ENSDARG00000035751 7095 1.548 - - - - - 0.722 - 0.826 - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
44. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.541 - 0.787 - - - - 0.754 - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
45. hm13 ENSDARG00000037846 5019 1.54 - - - 0.746 - - 0.794 - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
46. tceb1a 969 1.538 0.789 - - - - - 0.749 - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
47. PLEKHH3 ENSDARG00000070174 2117 1.538 0.721 0.817 - - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
48. ankrd12 ENSDARG00000052419 2579 1.537 - 0.715 - - - 0.822 - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
49. ppp2r2d ENSDARG00000102009 5710 1.537 - - - - - 0.819 0.718 - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
50. hic1l ENSDARG00000045660 1489 1.537 - 0.813 - - - - - - 0.724 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
51. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.534 - - - - - - 0.781 - 0.753 target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
52. hyou1 ENSDARG00000013670 4172 1.534 - 0.745 - - - - 0.789 - - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
53. TAF15 ENSDARG00000070019 5102 1.527 - 0.740 - - - - 0.787 - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
54. rer1 ENSDARG00000012747 6939 1.526 - - - 0.714 - - 0.812 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
55. ppp1r14bb ENSDARG00000030161 2349 1.522 0.765 0.757 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
56. polr2k ENSDARG00000075616 2047 1.522 - - - - - - 0.722 - 0.800 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
57. ubl3b ENSDARG00000021556 1210 1.52 - - - - - 0.731 - - 0.789 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
58. tes ENSDARG00000051857 2020 1.517 0.745 - - - - - 0.772 - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
59. eif4e3 ENSDARG00000005078 1624 1.515 - - - - - 0.770 - - 0.745 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
60. mafk ENSDARG00000100947 1460 1.513 - 0.746 - - - - 0.767 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
61. tet3 ENSDARG00000062646 6672 1.513 - 0.791 - - - - 0.722 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
62. tmed7 ENSDARG00000046022 2435 1.51 - 0.793 - - - - 0.717 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
63. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.51 0.784 - - 0.726 - - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
64. cldn12 ENSDARG00000003927 2024 1.509 - - - 0.733 - - 0.776 - - claudin 12 [Source:ZFIN;Acc:ZDB-GENE-010328-14]
65. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.508 0.714 - - - - - - - 0.794 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
66. eef2a.1 ENSDARG00000042094 1781 1.505 - - - 0.733 - - - - 0.772 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
67. ftsjd2 ftsjd2 2694 1.502 - 0.702 - - - - - - 0.800
68. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 1.502 - - - - - - 0.702 - 0.800 polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
69. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.496 0.742 - - - - - - - 0.754 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
70. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.495 - 0.719 - - - - - - 0.776 anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
71. kdm5c ENSDARG00000006124 4389 1.488 - - - - - - 0.769 - 0.719 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
72. pbk ENSDARG00000007221 1211 1.488 - - - - - 0.765 0.723 - - PDZ binding kinase [Source:ZFIN;Acc:ZDB-GENE-030523-2]
73. MTMR4 1374 1.48 - - - - - 0.716 0.764 - - myotubularin related protein 4, transcript variant X3
74. zgc:65772 zgc:65772 2092 1.48 - - - - - 0.772 - 0.708 -
75. wwp2 ENSDARG00000061345 3459 1.48 0.738 0.742 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
76. ranbp9 ENSDARG00000061048 2687 1.478 - - - - - - 0.753 - 0.725 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
77. luc7l ENSDARG00000055903 3357 1.476 0.759 - - - - - 0.717 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
78. dido1 ENSDARG00000057940 3819 1.475 - - - - - 0.727 - - 0.748 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
79. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.472 - - - - - - 0.705 - 0.767 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
80. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.47 0.701 - - - - 0.769 - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
81. srsf6a ENSDARG00000013729 8576 1.467 - - - - - - 0.709 - 0.758 serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
82. ube4b ENSDARG00000037017 8012 1.467 - - - 0.753 - 0.714 - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
83. cry1a cry1a 738 1.466 - 0.744 - 0.722 - - - - -
84. uck2b ENSDARG00000022213 1542 1.463 0.762 0.701 - - - - - - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
85. ror1 ENSDARG00000015176 378 1.46 - - - - - - 0.730 - 0.730 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
86. por por 1211 1.46 0.726 - - - - - 0.734 - -
87. arcn1a ENSDARG00000002792 2847 1.459 0.700 - - - - - 0.759 - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
88. ppp2r5ea ENSDARG00000015474 2179 1.457 - 0.709 - - - - 0.748 - - protein phosphatase 2, regulatory subunit B', epsilon isoform a [Source:ZFIN;Acc:ZDB-GENE-030904-7]
89. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 1.457 - 0.738 - 0.719 - - - - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
90. pxn_1 pxn_1 3991 1.456 0.721 0.735 - - - - - - -
91. OTTDARG00000032278 OTTDARG00000032278 1016 1.451 0.715 0.736 - - - - - - -
92. pvrl1b 1645 1.447 - - - 0.708 - - - - 0.739 poliovirus receptor-related 1b
93. ARID3A ENSDARG00000070843 1613 1.442 - 0.727 - - - - - - 0.715 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
94. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.442 - 0.718 - - - - - 0.724 - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
95. SNX2 ENSDARG00000104128 1501 1.441 0.716 - - - - 0.725 - - - sorting nexin 2 [Source:ZFIN;Acc:ZDB-GENE-051120-45]
96. MKI67 ENSDARG00000091150 11038 1.441 - - - - - - 0.708 - 0.733 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
97. TNRC6A ENSDARG00000079688 14433 1.438 - - - - - 0.710 0.728 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
98. ppp1r12a ENSDARG00000010784 4333 1.436 0.700 - - - - - - - 0.736 protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
99. rbmx ENSDARG00000014244 3445 1.436 0.701 - - - - - 0.735 - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
100. psmg1 ENSDARG00000040620 1359 1.435 0.709 - - - - - - - 0.726 proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]

There are 1323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA