Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bmp3

Gene Name Gene ID Reads Annotation
bmp3 ENSDARG00000060526, ENSDARG00000109238 54 bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]










Genes with expression patterns similar to bmp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
2. mgme1 ENSDARG00000016656 173 2.437 0.905 0.763 - 0.769 - - - - - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
3. CR790368.1 ENSDARG00000100936 20 1.963 - - - 0.969 - - 0.994 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
4. megf6a ENSDARG00000079199 103 1.86 - - - 0.936 - - 0.924 - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
5. kcnh6 kcnh6 59 1.858 - - - - - - 0.995 0.863 -
6. UBXN11 ENSDARG00000053828 22 1.826 0.859 - - 0.967 - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
7. LAMC2 ENSDARG00000068288 37 1.813 - 0.816 - - - - 0.997 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
8. CABZ01038313.1 CABZ01038313.1 79 1.795 0.869 - - - - - - 0.926 -
9. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 1.79 - 0.920 - - - - 0.870 - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
10. LRRC61 ENSDARG00000077357 55 1.779 - - - 0.935 - - - 0.844 - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
11. PLA2R1 ENSDARG00000077474 45 1.777 0.870 - - - - - - 0.907 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
12. SLC44A2 ENSDARG00000037059 88 1.766 - - - - - 0.785 0.981 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
13. TPMT TPMT 138 1.764 - 0.824 - - - - 0.940 - -
14. si:ch73-346o4.3 si:ch73-346o4.3 29 1.748 0.858 - - - - - - 0.890 -
15. tbc1d22a ENSDARG00000045510 363 1.744 - - - 0.760 - - 0.984 - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
16. chmp3 ENSDARG00000038064 577 1.744 - - - 0.817 - - 0.927 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
17. tctex1d1 ENSDARG00000103545 409 1.736 - 0.812 - - - - 0.924 - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
18. fubp3 ENSDARG00000086896 21 1.728 - - - - 0.733 - 0.995 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
19. slc44a1b ENSDARG00000090982 240 1.714 - - - - - 0.845 0.869 - - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
20. CR382327.2 ENSDARG00000097494 86 1.712 0.973 - - - - - - 0.739 -
21. TUBB6 ENSDARG00000104801 121 1.708 0.939 - - 0.769 - - - - - tubulin, beta 6 class V [Source:ZFIN;Acc:ZDB-GENE-070424-195]
22. twf1b ENSDARG00000011661 630 1.702 0.781 - - - - - 0.921 - - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
23. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1.698 0.913 - - - - 0.785 - - -
24. ptchd4 ENSDARG00000008249 17 1.696 - 0.743 - - 0.953 - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
25. tmem68 ENSDARG00000086737 209 1.689 - - - 0.729 - - 0.960 - - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
26. soul4 ENSDARG00000101008 147 1.687 0.816 0.871 - - - - - - - heme-binding protein soul4 [Source:ZFIN;Acc:ZDB-GENE-110718-1]
27. olfcg5 ENSDARG00000102459 5 1.687 - - - - 0.733 - - 0.954 - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
28. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.681 0.851 0.830 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
29. CABZ01074899.1 CABZ01074899.1 89 1.68 - 0.796 - - - - 0.884 - -
30. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.675 - - - - - - 0.842 0.833 - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
31. hlfb ENSDARG00000061011 48 1.672 0.884 0.788 - - - - - - - hepatic leukemia factor b [Source:ZFIN;Acc:ZDB-GENE-110420-3]
32. dennd1b ENSDARG00000101868 328 1.666 - - - 0.763 - - 0.903 - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
33. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.664 - - - 0.730 - - 0.934 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
34. si:dkey-43f9.4 si:dkey-43f9.4 180 1.656 0.730 - - - - - 0.926 - -
35. nmnat1 ENSDARG00000105748 102 1.651 - - - 0.879 - - - 0.772 - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
36. CLCC1 155 1.644 - 0.824 - - - - 0.820 - - chloride channel CLIC-like 1, transcript variant X2
37. hsd17b4 ENSDARG00000101239 301 1.643 0.782 0.861 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
38. fam193a ENSDARG00000102787 617 1.636 0.863 0.773 - - - - - - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
39. zgc:158868 ENSDARG00000069379, ENSDARG00000116578 121 1.628 0.855 - - - - - 0.773 - - zgc:158868 [Source:ZFIN;Acc:ZDB-GENE-070112-892]
40. yaf2 ENSDARG00000015966 1905 1.625 0.777 - - - - - 0.848 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
41. ZNF385D ENSDARG00000086162 202 1.623 0.915 - - - - - 0.708 - - zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
42. RUNDC1 ENSDARG00000091962 693 1.62 - 0.705 - - - - 0.915 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
43. tmem129 ENSDARG00000075346 109 1.618 - 0.701 - 0.917 - - - - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
44. commd1 ENSDARG00000031203 340 1.611 0.826 - - - - - 0.785 - - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
45. SH3PXD2A SH3PXD2A 177 1.608 0.839 0.769 - - - - - - -
46. phactr3a ENSDARG00000058243 150 1.607 - 0.825 - 0.782 - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
47. rps6kb1a ENSDARG00000018399 627 1.598 - 0.744 - 0.854 - - - - - ribosomal protein S6 kinase b, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-091113-52]
48. scdb ENSDARG00000030265 271 1.595 - - - 0.710 - - 0.885 - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
49. PRRT3 PRRT3 195 1.594 0.885 - - 0.709 - - - - -
50. SPOP ENSDARG00000100519 52 1.588 0.803 - - - - 0.785 - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
51. tnmd ENSDARG00000052615 42 1.581 - 0.824 - - - 0.757 - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
52. dvl3a ENSDARG00000015707 1132 1.579 0.725 0.854 - - - - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
53. ubn2 ubn2 534 1.571 0.792 - - - - - 0.779 - -
54. mcf2la ENSDARG00000075859 882 1.569 - 0.772 - - - - 0.797 - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
55. cpt1b ENSDARG00000058285 288 1.565 - 0.849 - - - - - 0.716 - carnitine palmitoyltransferase 1B (muscle) [Source:ZFIN;Acc:ZDB-GENE-041010-9]
56. GAL3ST4 ENSDARG00000079712 796 1.56 0.795 - - - - - 0.765 - - galactose-3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-080408-1]
57. si:ch211-202h22.9 ENSDARG00000079980 2 1.557 - 0.824 - - 0.733 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
58. SH3TC1 ENSDARG00000077330 8 1.557 - 0.824 - - 0.733 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
59. ENGASE ENSDARG00000010035 232 1.556 - - - 0.776 - - 0.780 - - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
60. pth1rb ENSDARG00000018418 193 1.55 0.796 0.754 - - - - - - - parathyroid hormone 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-991123-12]
61. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 1.549 - 0.848 - - - - 0.701 - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
62. syt2a ENSDARG00000025206 681 1.547 - - - 0.707 - - 0.840 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
63. BX470131.2 BX470131.2 135 1.545 0.730 0.815 - - - - - - -
64. si:dkey-260c8.6 ENSDARG00000096233 60 1.541 0.799 - - - - - - 0.742 - si:dkey-260c8.6 [Source:ZFIN;Acc:ZDB-GENE-120215-121]
65. bscl2 ENSDARG00000037008 429 1.539 - - - 0.720 - - 0.819 - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
66. tgm5l ENSDARG00000098837 174 1.536 - - - 0.754 - - 0.782 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
67. KCNK3 KCNK3 115 1.533 - 0.772 - - - 0.761 - - -
68. PLEKHA6 ENSDARG00000020328 2076 1.531 - 0.782 - - - - 0.749 - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
69. si:ch211-225b11.1 ENSDARG00000002405 172 1.525 0.745 - - 0.780 - - - - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
70. IER2 IER2 604 1.522 - 0.710 - - - - 0.812 - -
71. si:dkey-157g20.2 si:dkey-157g20.2 29 1.522 - 0.728 - - - 0.794 - - -
72. zgc:174696 ENSDARG00000110658 67 1.519 - 0.778 0.741 - - - - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
73. hdac10 ENSDARG00000086458 676 1.509 - - - - - 0.791 0.718 - - histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
74. si:ch211-194e1.8 si:ch211-194e1.8 14 1.509 - 0.778 - - - 0.731 - - -
75. lpcat4 ENSDARG00000035028 167 1.499 - - - - - - 0.749 0.750 - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
76. ano5b ENSDARG00000036147 89 1.496 - 0.736 - - - - 0.760 - - anoctamin 5b [Source:ZFIN;Acc:ZDB-GENE-061215-108]
77. BX324179.3 BX324179.3 326 1.46 - - - 0.750 - - - 0.710 -
78. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.452 - - - - - - 0.743 - 0.709 zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
79. ppfibp2b ENSDARG00000029168 961 1.425 0.724 - - 0.701 - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
80. pyya ENSDARG00000053449 134 1 - - - - 1.000 - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
81. si:ch211-168h21.3 10 1 - - - - 1.000 - - - - si:ch211-168h21.3
82. mfsd2aa ENSDARG00000030630 66 1 - - - - 1.000 - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
83. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - - - 1.000 - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
84. lratb 3 1 - - - - 1.000 - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
85. Metazoa_SRP_10 Metazoa_SRP_10 5 1 - - - - 1.000 - - - -
86. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1 1.000 - - - - - - - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
87. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1 - - - - 1.000 - - - - opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
88. si:dkey-14d8.2 38 1 - - - - 1.000 - - - - si:dkey-14d8.2
89. CUL9 2 1 - - - - 1.000 - - - - cullin 9
90. kcnh1a ENSDARG00000024167 9 1 - - - - 1.000 - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
91. TRHDE_1 TRHDE_1 102 0.999 - - - - - - 0.999 - -
92. ccrl1a ccrl1a 40 0.998 - - - - - - 0.998 - -
93. fpgt ENSDARG00000042139 155 0.998 - - - - - - 0.998 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
94. pign ENSDARG00000077532 123 0.998 - - - - - - 0.998 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
95. guca1c ENSDARG00000030758 9 0.997 - - - - - - 0.997 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
96. BICD2_1 BICD2_1 18 0.997 - - - - - - 0.997 - -
97. VWA5A_1 VWA5A_1 6 0.997 - - - - - - 0.997 - -
98. si:busm1-180g5.7 si:busm1-180g5.7 15 0.997 - - - - - - 0.997 - -
99. ttr ENSDARG00000037191 11 0.997 - - - - - - 0.997 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
100. zgc:136254 ENSDARG00000068465 27 0.997 - - - - - - 0.997 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]

There are 1710 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA