Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bmb

Gene Name Gene ID Reads Annotation
bmb ENSDARG00000096603 120 brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]










Genes with expression patterns similar to bmb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bmb ENSDARG00000096603 120 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
2. si:dkey-234h16.7 ENSDARG00000095754 115 2.574 - 0.978 - - - - 0.781 - 0.815 si:dkey-234h16.7 [Source:ZFIN;Acc:ZDB-GENE-060601-3]
3. fbxo15 ENSDARG00000016897 18 1.904 - 0.960 - - - - 0.944 - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
4. cldn11a ENSDARG00000020031 284 1.848 - 0.984 - - - - - - 0.864 claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
5. si:ch211-281g2.4 si:ch211-281g2.4 121 1.79 - 0.978 - 0.812 - - - - -
6. rergla ENSDARG00000019396 42 1.789 0.832 0.957 - - - - - - - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
7. tprn ENSDARG00000101102 97 1.776 - 0.984 - - - 0.792 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
8. guk1b ENSDARG00000005776 23 1.761 - 0.959 - - - - - - 0.802 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
9. CHCHD5 ENSDARG00000091754 35 1.758 0.860 - - - - - 0.898 - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
10. foxi1 ENSDARG00000104566 176 1.737 - 0.984 - - - 0.753 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
11. vtg3 ENSDARG00000016448 8 1.737 - 0.984 - - - 0.753 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
12. eno1b ENSDARG00000013750 63 1.734 - 0.814 - - - - - - 0.920 enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
13. dbpa ENSDARG00000063014 107 1.721 - 0.964 - - - - - - 0.757 D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
14. CT030046.1 CT030046.1 190 1.716 - 0.984 - 0.732 - - - - -
15. CT583626.2 CT583626.2 53 1.701 - 0.984 - - - - 0.717 - -
16. si:dkey-100h21.2 si:dkey-100h21.2 30 1.687 0.703 0.984 - - - - - - -
17. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.687 0.703 0.984 - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
18. si:ch211-198e13.3 5 1.685 - 0.880 - - - 0.805 - - - si:ch211-198e13.3, transcript variant X1
19. hlfb ENSDARG00000061011 48 1.667 - - - - - - 0.837 - 0.830 hepatic leukemia factor b [Source:ZFIN;Acc:ZDB-GENE-110420-3]
20. CABZ01072853.1 CABZ01072853.1 35 1.663 - 0.875 - - - - - - 0.788
21. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.655 - 0.902 - - - 0.753 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
22. CR759921.2 CR759921.2 583 1.655 - 0.845 - - - - - - 0.810
23. SNORA62 SNORA62 39 1.649 0.703 0.946 - - - - - - -
24. C20H1orf198 C20H1orf198 246 1.637 - - - - - 0.890 - - 0.747
25. inaa ENSDARG00000011862 115 1.631 - 0.815 - - - - - - 0.816 internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
26. rwdd3 ENSDARG00000057315 289 1.626 - 0.881 - - - - - 0.745 - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
27. BX005423.3 BX005423.3 33 1.612 - 0.895 - - - - 0.717 - -
28. fos fos 817 1.6 - - - - - - - 0.766 0.834
29. cx40.8 ENSDARG00000071192 105 1.594 0.758 - - - - - - - 0.836 connexin 40.8 [Source:ZFIN;Acc:ZDB-GENE-050616-10]
30. manba ENSDARG00000008238 25 1.589 - 0.887 - 0.702 - - - - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
31. armc4 ENSDARG00000055128 220 1.582 0.833 0.749 - - - - - - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
32. DYRK3 ENSDARG00000070600, ENSDARG00000115625 127 1.579 - 0.834 - - - - - 0.745 - dual specificity tyrosine phosphorylation regulated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-080219-31]
33. si:dkey-261l7.2 ENSDARG00000094345 51 1.576 0.719 - - - - - - - 0.857 si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
34. si:ch211-284e13.5 ENSDARG00000094725 68 1.572 - 0.743 - - - - - - 0.829 si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
35. gpr39 ENSDARG00000102888 46 1.572 0.703 - - - - - - 0.869 - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
36. pms1 ENSDARG00000000476 105 1.571 - 0.791 - - - - - 0.780 - PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]
37. rab11fip1a ENSDARG00000046124 69 1.571 - 0.869 - - - - - - 0.702 RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
38. trmu ENSDARG00000043734 291 1.567 - - - - - - 0.805 - 0.762 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-540]
39. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.562 - - - - - - - 0.763 0.799 potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
40. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1.541 - - - 0.742 - - - 0.799 - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
41. shank3b ENSDARG00000063054 148 1.523 0.756 0.767 - - - - - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
42. gadd45bb ENSDARG00000013576 331 1.5 - - - 0.722 - - - - 0.778 growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
43. si:dkey-247i3.3 si:dkey-247i3.3 297 1.489 - 0.770 - - - 0.719 - - -
44. tbc1d15 ENSDARG00000057218 224 1.488 - 0.764 - - - - - - 0.724 TBC1 domain family, member 15 [Source:ZFIN;Acc:ZDB-GENE-041111-251]
45. braf ENSDARG00000017661 106 1.472 - - - - - 0.711 - - 0.761 B-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040805-1]
46. HBQ1 HBQ1 413 1.471 0.703 - - - - - 0.768 - -
47. CT573356.3 CT573356.3 2 1.47 - - - - - 0.753 0.717 - -
48. hcfc2 ENSDARG00000058127 490 1.459 - 0.709 - - - - - 0.750 - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
49. ankib1a ENSDARG00000060768 334 1.437 - 0.713 - - - - 0.724 - - ankyrin repeat and IBR domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-156]
50. ggctb ENSDARG00000005085 704 1.429 - - - - - - 0.710 - 0.719 gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
51. shpk ENSDARG00000002355 84 1.405 0.703 - - - - 0.702 - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
52. cuedc1a ENSDARG00000068716 232 0.988 - 0.988 - - - - - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
53. gcdhl gcdhl 38 0.984 - 0.984 - - - - - - -
54. anxa5a ENSDARG00000026406 19 0.984 - 0.984 - - - - - - - annexin A5a [Source:ZFIN;Acc:ZDB-GENE-080220-29]
55. zfpm2b ENSDARG00000100560 125 0.984 - 0.984 - - - - - - - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
56. gstp2 ENSDARG00000103019 9 0.984 - 0.984 - - - - - - - glutathione S-transferase pi 2 [Source:ZFIN;Acc:ZDB-GENE-050601-1]
57. si:dkey-52j6.1 si:dkey-52j6.1 3 0.984 - 0.984 - - - - - - -
58. si:dkeyp-2c8.3 ENSDARG00000093811 2 0.984 - 0.984 - - - - - - - si:dkeyp-2c8.3 [Source:ZFIN;Acc:ZDB-GENE-081031-97]
59. si:dkeyp-82b4.2 ENSDARG00000112648 14 0.984 - 0.984 - - - - - - - si:dkeyp-82b4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-561]
60. si:ch211-232m19.4 19 0.984 - 0.984 - - - - - - - si:ch211-232m19.4
61. si:ch211-222b21.3 si:ch211-222b21.3 2 0.984 - 0.984 - - - - - - -
62. fmnl1a ENSDARG00000055713 57 0.984 - 0.984 - - - - - - - formin-like 1a [Source:ZFIN;Acc:ZDB-GENE-120215-83]
63. osbp2 ENSDARG00000053487 42 0.984 - 0.984 - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
64. si:ch73-138e16.1 si:ch73-138e16.1 5 0.984 - 0.984 - - - - - - -
65. BRD8 ENSDARG00000055999 34 0.984 - 0.984 - - - - - - - bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]
66. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 0.984 - 0.984 - - - - - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
67. si:ch73-346m18.6 si:ch73-346m18.6 40 0.984 - 0.984 - - - - - - -
68. CABZ01055343.2_1 CABZ01055343.2_1 6 0.984 - 0.984 - - - - - - -
69. si:ch211-71k24.5 si:ch211-71k24.5 9 0.984 - 0.984 - - - - - - -
70. si:ch211-207m11.2 si:ch211-207m11.2 63 0.984 - 0.984 - - - - - - -
71. si:ch211-250k18.7 ENSDARG00000093761 2 0.984 - 0.984 - - - - - - - si:ch211-250k18.7 [Source:ZFIN;Acc:ZDB-GENE-070912-246]
72. DHDH DHDH 15 0.984 - 0.984 - - - - - - -
73. FHOD1 ENSDARG00000051768 43 0.984 - 0.984 - - - - - - - formin homology 2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110623-4]
74. samsn1a ENSDARG00000054543 28 0.984 - 0.984 - - - - - - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
75. KCNK17 ENSDARG00000105453 16 0.984 - 0.984 - - - - - - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
76. CCKBR CCKBR 88 0.984 - 0.984 - - - - - - -
77. si:dkey-4c15.19 si:dkey-4c15.19 219 0.984 - 0.984 - - - - - - -
78. kcng4 kcng4 37 0.984 - 0.984 - - - - - - -
79. nrgna ENSDARG00000039626 50 0.984 - 0.984 - - - - - - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
80. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 0.984 - 0.984 - - - - - - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
81. cabp4 ENSDARG00000008866 4 0.984 - 0.984 - - - - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]
82. crygm2d3 ENSDARG00000088823 1560 0.984 - 0.984 - - - - - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
83. guca1d ENSDARG00000044629, ENSDARG00000115722 22 0.984 - 0.984 - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
84. ttc33 ENSDARG00000035406, ENSDARG00000111770 82 0.984 - 0.984 - - - - - - - tetratricopeptide repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040718-480]
85. zgc:174700_1 zgc:174700_1 60 0.984 - 0.984 - - - - - - -
86. aqp9b ENSDARG00000053480 16 0.984 - 0.984 - - - - - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
87. si:ch211-190k17.19 ENSDARG00000095756 19 0.984 - 0.984 - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
88. slc6a11a ENSDARG00000074002 189 0.984 - 0.984 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
89. si:ch211-269e2.1 ENSDARG00000074225 128 0.984 - 0.984 - - - - - - - si:ch211-269e2.1 [Source:ZFIN;Acc:ZDB-GENE-070912-267]
90. CD37 ENSDARG00000075515, ENSDARG00000111538 11 0.984 - 0.984 - - - - - - - CD37 molecule [Source:ZFIN;Acc:ZDB-GENE-070820-17]
91. tmc6a ENSDARG00000069787 3 0.984 - 0.984 - - - - - - - transmembrane channel-like 6a [Source:ZFIN;Acc:ZDB-GENE-081114-3]
92. ENSDARG00000043008 ENSDARG00000043008 8 0.984 - 0.984 - - - - - - -
93. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 0.984 - 0.984 - - - - - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
94. AL935181.2 AL935181.2 9 0.984 - 0.984 - - - - - - -
95. BEND4 ENSDARG00000113607 2 0.984 - 0.984 - - - - - - - BEN domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23815]
96. GABRB1 ENSDARG00000076127 16 0.984 - 0.984 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 1 [Source:ZFIN;Acc:ZDB-GENE-090313-230]
97. U6_15 U6_15 2 0.984 - 0.984 - - - - - - -
98. snpha ENSDARG00000078485 4 0.984 - 0.984 - - - - - - - syntaphilin a [Source:ZFIN;Acc:ZDB-GENE-081104-227]
99. CABZ01059408.1 ENSDARG00000116928 24 0.984 - 0.984 - - - - - - -
100. si:ch73-223d24.4 si:ch73-223d24.4 5 0.984 - 0.984 - - - - - - -

There are 1220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA