Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bin3

Gene Name Gene ID Reads Annotation
bin3 ENSDARG00000099651 3295 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]










Genes with expression patterns similar to bin3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bin3 ENSDARG00000099651 3295 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
2. ppt1 ENSDARG00000039980 1599 2.34 - 0.734 - - - 0.763 0.843 - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
3. exosc1 ENSDARG00000059841 6895 2.175 0.725 0.725 - - - - 0.725 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
4. meaf6 ENSDARG00000101216 6865 1.832 - 0.839 - - - - - - 0.993 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
5. txndc17 ENSDARG00000058079 3533 1.774 - - - - - - 0.775 - 0.999 thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
6. atg5 ENSDARG00000023396 1726 1.774 - - - - - 0.775 - - 0.999 ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
7. tmed9 ENSDARG00000004261 10013 1.744 - - - - - - 0.751 - 0.993 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
8. arl8bb ENSDARG00000070318 1428 1.72 - 0.721 - - - - - - 0.999 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
9. macc1 ENSDARG00000040717 1669 1.719 - - - - - - 0.775 - 0.944 metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
10. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 1.715 - 0.717 - - - - - - 0.998 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
11. NDNF ENSDARG00000062936 7287 1.699 - - - - 0.706 - - - 0.993 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
12. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.678 - 0.816 - - - - 0.862 - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
13. zgc:64085 zgc:64085 955 1.664 - 0.834 - - - - 0.830 - -
14. hsdl2 ENSDARG00000002523 2746 1.632 - 0.760 - - - - 0.872 - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
15. NBEAL1 ENSDARG00000099547 1112 1.623 - 0.826 - - - 0.797 - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
16. CU928083.1 ENSDARG00000097907 1279 1.61 - - - 0.745 - - 0.865 - -
17. grhl2b ENSDARG00000061974 779 1.61 - 0.818 - - - - 0.792 - - grainyhead-like transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-060503-719]
18. capg capg 2569 1.598 - - - - - 0.872 0.726 - -
19. ENSDARG00000058255 ENSDARG00000058255 1715 1.586 - 0.797 - - - 0.789 - - -
20. zfp36l1a ENSDARG00000016154 4305 1.578 - - - - - 0.703 0.875 - - zinc finger protein 36, C3H type-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9860]
21. C3_2 C3_2 1084 1.576 0.858 - - - - - 0.718 - -
22. txnrd1 11401 1.569 - - - - - 0.786 0.783 - - thioredoxin reductase 1
23. col12a1a ENSDARG00000078322 1833 1.562 0.847 - - - - - 0.715 - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
24. rhbdf1 rhbdf1 1608 1.556 - 0.856 - - - - 0.700 - -
25. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.555 - 0.751 - 0.804 - - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
26. MTUS1 MTUS1 1334 1.552 - - - - - 0.757 0.795 - -
27. dhrs7 ENSDARG00000003444 812 1.549 - 0.778 - - - - 0.771 - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
28. sepw1 17630 1.547 - 0.805 - - - - 0.742 - - selenoprotein W, 1
29. sirt2 ENSDARG00000011488 5389 1.544 0.727 - - - - - 0.817 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
30. zgc:172075 ENSDARG00000076146 93 1.54 - - - 0.826 - 0.714 - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
31. swap70a ENSDARG00000051819 115 1.536 0.784 0.752 - - - - - - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
32. sp4 ENSDARG00000005186 2904 1.529 - - - - - 0.739 0.790 - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
33. zdhhc16b ENSDARG00000015989 193 1.529 - 0.721 - 0.808 - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
34. sun1 ENSDARG00000055350 3622 1.526 - 0.733 - - - 0.793 - - - Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
35. tmem18 ENSDARG00000036704 1784 1.524 - - - - - 0.771 - 0.753 - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
36. gpm6ab ENSDARG00000004621 5825 1.522 - 0.721 - - - - 0.801 - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
37. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.522 - - - - - 0.756 0.766 - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
38. numb ENSDARG00000027279 2905 1.521 - 0.777 - - - - 0.744 - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
39. keap1b ENSDARG00000074634 1513 1.521 0.742 0.779 - - - - - - - kelch-like ECH-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-080508-1]
40. stx2b ENSDARG00000068217 2567 1.521 - 0.814 - - - - 0.707 - - syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
41. tjp2a ENSDARG00000063309 1947 1.518 - - - 0.735 - 0.783 - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
42. si:dkeyp-13a3.10 ENSDARG00000092225 1054 1.517 0.768 - - - - 0.749 - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
43. chpt1 ENSDARG00000014572 2926 1.513 - 0.763 - - - - 0.750 - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
44. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.511 - 0.805 - - - - 0.706 - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
45. CT573389.2 CT573389.2 1183 1.51 - 0.777 - - - - 0.733 - -
46. tecra ENSDARG00000101585 609 1.503 - 0.709 - - - - 0.794 - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
47. RALGAPB ENSDARG00000088899 1456 1.502 - 0.715 - - - - 0.787 - - Ral GTPase activating protein, beta subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-130530-945]
48. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.501 - 0.774 - - - - 0.727 - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
49. tln1 ENSDARG00000100729 5744 1.499 - 0.791 - - - 0.708 - - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
50. ppm1h ENSDARG00000063684 1446 1.498 - 0.702 - - - - 0.796 - - protein phosphatase, Mg2+/Mn2+ dependent, 1H [Source:ZFIN;Acc:ZDB-GENE-061027-190]
51. lama5 ENSDARG00000058543 2782 1.496 - - - - - 0.790 0.706 - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
52. arpc1a ENSDARG00000008383 7353 1.492 - 0.789 - - - - 0.703 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
53. SMIM22 ENSDARG00000105068 246 1.492 - 0.762 - - - - 0.730 - - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
54. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.488 - 0.731 - - - - 0.757 - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
55. chmp5b ENSDARG00000103718 1608 1.479 - 0.715 - - - 0.764 - - - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
56. TAPT1 TAPT1 1165 1.479 - - - 0.761 - - 0.718 - -
57. snx14 ENSDARG00000006332 435 1.479 - 0.770 - 0.709 - - - - - sorting nexin 14 [Source:ZFIN;Acc:ZDB-GENE-040724-144]
58. cisd2 ENSDARG00000052703 2841 1.479 - 0.773 - 0.706 - - - - - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
59. slc26a5 ENSDARG00000022424 976 1.479 - 0.732 - - - - 0.747 - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
60. sec62 ENSDARG00000019951 3724 1.477 - 0.722 - - - - 0.755 - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
61. notch2 ENSDARG00000043130 4430 1.476 - - - - - 0.756 0.720 - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
62. hdac4 ENSDARG00000098349 1370 1.473 - 0.734 - - - - 0.739 - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
63. pdlim1 ENSDARG00000019845 5765 1.472 - - - - - 0.719 0.753 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
64. anxa5b ENSDARG00000016470 2934 1.472 - 0.754 - - - - 0.718 - - annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
65. ssh2b ENSDARG00000098955 614 1.471 - 0.732 - 0.739 - - - - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
66. fam160a1 fam160a1 1445 1.471 - 0.733 - - - 0.738 - - -
67. cyth3 cyth3 120 1.47 - 0.768 - - - - - 0.702 -
68. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.469 - - - - - 0.703 0.766 - - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
69. im:7148400 im:7148400 787 1.465 - 0.718 - - - - 0.747 - -
70. pi4k2b ENSDARG00000013881 1337 1.465 - 0.747 - - - - 0.718 - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
71. gmfb ENSDARG00000028327 6522 1.465 - 0.715 - - - - 0.750 - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
72. zgc:91985 zgc:91985 1517 1.463 - 0.732 - 0.731 - - - - -
73. vps26bl ENSDARG00000055433 645 1.463 - 0.741 - 0.722 - - - - - vacuolar protein sorting 26 homolog B, like [Source:ZFIN;Acc:ZDB-GENE-040718-112]
74. ch1073-291c23.1 2426 1.461 - 0.704 - - - - 0.757 - - ch1073-291c23.1, transcript variant X6
75. yipf3 ENSDARG00000020449 3312 1.456 - - - - - 0.745 0.711 - - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
76. si:ch211-212g7.6 ENSDARG00000079369 707 1.451 0.736 - - - - - 0.715 - - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
77. vta1 ENSDARG00000013732 6072 1.447 - 0.700 - - - 0.747 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
78. actr2a ENSDARG00000052438 5838 1.442 - - - - - 0.739 0.703 - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
79. ghra ENSDARG00000054771, ENSDARG00000112689 2883 1.439 - - - - - 0.726 0.713 - - growth hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-070509-1]
80. hyou1 ENSDARG00000013670 4172 1.438 - 0.711 - - - - - 0.727 - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
81. mid1ip1b ENSDARG00000019302 1589 1.436 - 0.715 - - - 0.721 - - - MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
82. si:dkey-199f5.8 ENSDARG00000018853 3249 1.435 - 0.707 - - - - 0.728 - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
83. fryl ENSDARG00000040001 3256 1.435 - - - - - 0.726 0.709 - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
84. TSTA3 ENSDARG00000039666 1776 1.412 - 0.707 - - - 0.705 - - - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
85. slc25a42 ENSDARG00000099368 2420 1.41 - - - - - 0.710 0.700 - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
86. mogat3b ENSDARG00000003635 394 1.406 - - - - - 0.704 0.702 - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
87. pigk ENSDARG00000024479 1386 0.999 - - - - - - - - 0.999 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
88. TMEM254 ENSDARG00000109902 3377 0.999 - - - - - - - - 0.999 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
89. palld ENSDARG00000040009 2381 0.999 - - - - - - - - 0.999 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
90. snrnp27 ENSDARG00000035625 9080 0.999 - - - - - - - - 0.999 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
91. rufy3 ENSDARG00000029692 3031 0.999 - - - - - - - - 0.999 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
92. slc37a4a ENSDARG00000038106 1375 0.999 - - - - - - - - 0.999 solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
93. si:ch211-262h13.3 ENSDARG00000070898 2094 0.999 - - - - - - - - 0.999 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
94. psma6b ENSDARG00000013966 4410 0.999 - - - - - - - - 0.999 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
95. ptrhd1 ENSDARG00000016122 2705 0.999 - - - - - - - - 0.999 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
96. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.999 - - - - - - - - 0.999 interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
97. mkln1 ENSDARG00000025576 1122 0.999 - - - - - - - - 0.999 muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
98. fam50a ENSDARG00000024895 3020 0.999 - - - - - - - - 0.999 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
99. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.999 - - - - - - - - 0.999 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
100. IGLON5 ENSDARG00000022176 1353 0.999 - - - - - - - - 0.999 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]

There are 1319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA