Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bhlhe41

Gene Name Gene ID Reads Annotation
bhlhe41 ENSDARG00000041691, ENSDARG00000112123, ENSDARG00000114358 302 basic helix-loop-helix family, member e41 [Source:ZFIN;Acc:ZDB-GENE-050419-146]










Genes with expression patterns similar to bhlhe41

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bhlhe41 ENSDARG00000041691, ENSDARG00000112123, ENSDARG00000114358 302 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 basic helix-loop-helix family, member e41 [Source:ZFIN;Acc:ZDB-GENE-050419-146]
2. TMEM97 ENSDARG00000040553 530 1.683 - - - - - - 0.761 - 0.922 transmembrane protein 97 [Source:ZFIN;Acc:ZDB-GENE-110627-1]
3. tbp ENSDARG00000014994 1591 1.659 - 0.743 - - - - - - 0.916 TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
4. ildr1b ENSDARG00000040910 169 1.605 - 0.783 - - - - 0.822 - - immunoglobulin-like domain containing receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040912-72]
5. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.565 - - - - - 0.708 - - 0.857 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
6. vps41 ENSDARG00000063573 581 1.514 - - - - - 0.782 0.732 - - vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6671]
7. ZNF337_6 ZNF337_6 898 1.491 - - - - - 0.742 0.749 - -
8. fam49bb ENSDARG00000045417 513 1.432 - 0.702 - - - - 0.730 - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
9. snx22 ENSDARG00000053204 148 1.422 - 0.706 - - - - 0.716 - - sorting nexin 22 [Source:ZFIN;Acc:ZDB-GENE-060825-154]
10. tp53i11b ENSDARG00000006025 569 0.971 - - - - - - - - 0.971 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
11. nrg1 ENSDARG00000104314 1081 0.969 - - - - - - - - 0.969 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
12. FP236810.2 ENSDARG00000113218 140 0.968 - - - - - - - - 0.968 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
13. dnajc12 ENSDARG00000086691 260 0.968 - - - - - - - - 0.968 DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
14. si:ch73-138e16.8 175 0.968 - - - - - - - - 0.968 si:ch73-138e16.8
15. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.966 - - - - - - - - 0.966 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
16. CT030712.1 ENSDARG00000044355 83 0.964 - - - - - - - - 0.964 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
17. FAM83H FAM83H 190 0.964 - - - - - - - - 0.964
18. CABZ01063402.1 CABZ01063402.1 64 0.964 - - - - - - - - 0.964
19. si:dkey-246e3.4 ENSDARG00000086390 50 0.964 - - - - - - - - 0.964 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
20. si:ch211-195h23.3 ENSDARG00000068431 322 0.964 - - - - - - - - 0.964 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
21. si:ch211-89o5.1 si:ch211-89o5.1 91 0.964 - - - - - - - - 0.964
22. enpp6 ENSDARG00000040469 187 0.964 - - - - - - - - 0.964 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
23. ERAP1_1 ERAP1_1 64 0.964 - - - - - - - - 0.964
24. myo18ab ENSDARG00000061862 124 0.963 - - - - - - - - 0.963 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
25. MIER3 MIER3 114 0.963 - - - - - - - - 0.963
26. rnf165a ENSDARG00000077906 133 0.963 - - - - - - - - 0.963 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
27. TIMP4 TIMP4 599 0.963 - - - - - - - - 0.963
28. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.963 - - - - - - - - 0.963 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
29. casp2 ENSDARG00000062052 559 0.963 - - - - - - - - 0.963 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
30. per1b ENSDARG00000012499 320 0.962 - - - - - - - - 0.962 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
31. ACBD3 ENSDARG00000042623 159 0.962 - - - - - - - - 0.962 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
32. CR388047.3 ENSDARG00000117023 89 0.962 - - - - - - - - 0.962
33. zgc:153151 ENSDARG00000069563 126 0.961 - - - - - - - - 0.961 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
34. trim33l ENSDARG00000086126 241 0.961 - - - - - - - - 0.961 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
35. cadpsa ENSDARG00000043661 160 0.96 - - - - - - - - 0.960 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
36. asb13b ENSDARG00000089833 251 0.96 - - - - - - - - 0.960 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
37. gpr1 ENSDARG00000101366 733 0.96 - - - - - - - - 0.960 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
38. glsb ENSDARG00000040705 1439 0.96 - - - - - - - - 0.960 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
39. prmt10 prmt10 312 0.96 - - - - - - - - 0.960
40. si:ch211-232i5.1 ENSDARG00000078072 1337 0.96 - - - - - - - - 0.960 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
41. ythdf3 ENSDARG00000057939 475 0.959 - - - - - - - - 0.959 YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
42. TPMT TPMT 138 0.958 - - - - - - - - 0.958
43. MAP1S MAP1S 123 0.958 - - - - - - - - 0.958
44. si:ch211-129c21.1 ENSDARG00000024775 371 0.958 - - - - - - - - 0.958 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
45. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 0.958 - - - - - - - - 0.958 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
46. C20H1orf131 C20H1orf131 406 0.957 - - - - - - - - 0.957
47. eve1 ENSDARG00000056012 144 0.957 - - - - - - - - 0.957 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
48. PFKL_1 PFKL_1 298 0.957 - - - - - - - - 0.957
49. prkcbb ENSDARG00000022254 319 0.957 - - - - - - - - 0.957 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
50. calhm2 ENSDARG00000039482 138 0.956 - - - - - - - - 0.956 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
51. lrp1bb ENSDARG00000061517 172 0.956 - - - - - - - - 0.956 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
52. zgc:113184 ENSDARG00000098181 500 0.956 - - - - - - - - 0.956 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
53. nfu1 ENSDARG00000068125 1743 0.956 - - - - - - - - 0.956 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
54. cd36 ENSDARG00000032639 288 0.955 - - - - - - - - 0.955 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
55. plch1 ENSDARG00000079253 1216 0.955 - - - - - - - - 0.955 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
56. C25H12orf4 C25H12orf4 317 0.955 - - - - - - - - 0.955
57. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.955 - - - - - - - - 0.955 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
58. GRAMD2 GRAMD2 300 0.955 - - - - - - - - 0.955
59. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.954 - - - - - - - - 0.954 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
60. zgc:112263 zgc:112263 473 0.953 - - - - - - - - 0.953
61. chid1 ENSDARG00000069673 675 0.953 - - - - - - - - 0.953 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
62. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.953 - - - - - - - - 0.953 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
63. b3gat2 ENSDARG00000030733 348 0.953 - - - - - - - - 0.953 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
64. trpc4apb ENSDARG00000020647 670 0.953 - - - - - - - - 0.953 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
65. BX004880.1 BX004880.1 638 0.952 - - - - - - - - 0.952
66. cplx3b ENSDARG00000089486 315 0.952 - - - - - - - - 0.952 complexin 3b [Source:ZFIN;Acc:ZDB-GENE-091204-403]
67. ano5a ENSDARG00000015731 601 0.951 - - - - - - - - 0.951 anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
68. gba2 ENSDARG00000061472 171 0.951 - - - - - - - - 0.951 glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
69. KIF2A_1 ENSDARG00000043571 189 0.951 - - - - - - - - 0.951 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
70. FUZ ENSDARG00000079730 821 0.951 - - - - - - - - 0.951 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
71. nxnl2 ENSDARG00000003934 386 0.95 - - - - - - - - 0.950 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
72. mov10a ENSDARG00000015829 566 0.95 - - - - - - - - 0.950 Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
73. cdx4 ENSDARG00000036292 1225 0.95 - - - - - - - - 0.950 caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
74. cog2 ENSDARG00000004037 462 0.95 - - - - - - - - 0.950 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
75. CR954145.1 CR954145.1 327 0.95 - - - - - - - - 0.950
76. NAALAD2 ENSDARG00000021383 704 0.95 - - - - - - - - 0.950 N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
77. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.95 - - - - - - - - 0.950 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
78. rhd ENSDARG00000002194 269 0.949 - - - - - - - - 0.949 Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
79. mov10b.1 ENSDARG00000061177 370 0.949 - - - - - - - - 0.949 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
80. ikzf5 ENSDARG00000056491, ENSDARG00000116693 686 0.949 - - - - - - - - 0.949 IKAROS family zinc finger 5 [Source:ZFIN;Acc:ZDB-GENE-040801-209]
81. smarcd2 ENSDARG00000088877 416 0.948 - - - - - - - - 0.948 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
82. EMP3 EMP3 523 0.948 - - - - - - - - 0.948
83. mto1 ENSDARG00000055679 859 0.948 - - - - - - - - 0.948 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
84. adpgk ENSDARG00000063525, ENSDARG00000115539 754 0.947 - - - - - - - - 0.947 ADP-dependent glucokinase [Source:ZFIN;Acc:ZDB-GENE-061103-421]
85. mlx ENSDARG00000037891 433 0.947 - - - - - - - - 0.947 MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]
86. galnt11 ENSDARG00000063636 1188 0.947 - - - - - - - - 0.947 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
87. BX569781.3 BX569781.3 576 0.947 - - - - - - - - 0.947
88. grhl3 ENSDARG00000078552 897 0.946 - - - - - - - - 0.946 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
89. hoxb13a ENSDARG00000056015 174 0.946 - - - - - - - - 0.946 homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
90. ddx27 ENSDARG00000091831 1471 0.945 - - - - - - - - 0.945 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
91. adnp2a ENSDARG00000060937 562 0.945 - - - - - - - - 0.945 ADNP homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040914-55]
92. lypd6b ENSDARG00000077643 650 0.945 - - - - - - - - 0.945 LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]
93. endog ENSDARG00000058865 679 0.945 - - - - - - - - 0.945 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
94. ascc1 ENSDARG00000077760 618 0.944 - - - - - - - - 0.944 activating signal cointegrator 1 complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-80]
95. GRAMD1C ENSDARG00000076238 795 0.944 - - - - - - - - 0.944 GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
96. rnf170 ENSDARG00000104069 838 0.944 - - - - - - - - 0.944 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
97. cyr61 ENSDARG00000023062 1213 0.944 - - - - - - - - 0.944 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
98. atrip ENSDARG00000063076 385 0.943 - - - - - - - - 0.943 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
99. arl16 ENSDARG00000059498, ENSDARG00000110386 229 0.942 - - - - - - - - 0.942 ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
100. CABZ01032467.1 CABZ01032467.1 400 0.942 - - - - - - - - 0.942

There are 756 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA