Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bgnb

Gene Name Gene ID Reads Annotation
bgnb ENSDARG00000002945, ENSDARG00000110495 76 biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]










Genes with expression patterns similar to bgnb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bgnb ENSDARG00000002945, ENSDARG00000110495 76 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
2. dusp14 ENSDARG00000057625, ENSDARG00000111613 68 1.681 - - 0.889 - - - 0.792 - - dual specificity phosphatase 14 [Source:ZFIN;Acc:ZDB-GENE-041010-162]
3. chrna6 ENSDARG00000055559 60 1.658 - - 0.886 - - 0.772 - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
4. RAPGEF4 ENSDARG00000079872 82 1.654 - - - - - 0.911 0.743 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
5. FAM184A ENSDARG00000014081 34 1.636 - - - - - 0.895 0.741 - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
6. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1.632 - - - - 0.928 0.704 - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
7. serpine3 ENSDARG00000057108 49 1.615 - - 0.893 - - 0.722 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
8. ubox5 ENSDARG00000058563 161 1.606 - - 0.703 - 0.903 - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
9. si:dkey-78o7.3 ENSDARG00000100387 59 1.583 - - - - 0.861 0.722 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
10. PRKAR2B ENSDARG00000036446 812 1.581 - - - - 0.812 0.769 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
11. rap2ab ENSDARG00000040246 63 1.558 - - - - 0.746 0.812 - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
12. rab11bb ENSDARG00000090086 43 1.556 - - - - - 0.760 0.796 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
13. LMTK3 LMTK3 222 1.544 - - 0.796 - - 0.748 - - -
14. RSF1 RSF1 1242 1.509 - - - - 0.805 0.704 - - -
15. inpp4ab ENSDARG00000070995 287 1.467 - - - - 0.755 0.712 - - - inositol polyphosphate-4-phosphatase type I Ab [Source:ZFIN;Acc:ZDB-GENE-081104-521]
16. DIP2B DIP2B 18 1.465 - - - - - 0.722 0.743 - -
17. C24H8orf34 C24H8orf34 1 1.465 - - - - - 0.722 0.743 - -
18. zgc:153846 ENSDARG00000040738 1 1.465 - - - - - 0.722 0.743 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
19. stx12l ENSDARG00000044605 99 1.442 - - 0.716 - - 0.726 - - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
20. gpr75 ENSDARG00000098526 32 1 - - - - - 1.000 - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
21. CDH12 CDH12 44 1 - - - - - 1.000 - - -
22. csnk1g1 ENSDARG00000104342 57 1 - - - - - 1.000 - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
23. fam184a ENSDARG00000014081 93 1 - - - - - 1.000 - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
24. GALNTL6 ENSDARG00000040048 33 1 - - - - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
25. prlh2 ENSDARG00000071735, ENSDARG00000110890 21 0.988 - - - - - 0.988 - - - prolactin releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-091204-205]
26. wdr47b ENSDARG00000099757 93 0.988 - - - - - 0.988 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
27. CU151895.1 CU151895.1 103 0.98 - - - - - 0.980 - - -
28. grik5 ENSDARG00000101449, ENSDARG00000111384 75 0.979 - - - - - 0.979 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
29. tlx2 ENSDARG00000011273 870 0.973 - - - - - 0.973 - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
30. wu:fe36b12 wu:fe36b12 118 0.972 - - - - - 0.972 - - -
31. Mar-09 Mar-09 126 0.958 - - - - - 0.958 - - -
32. fes ENSDARG00000011449 46 0.956 - - - - 0.956 - - - - FES proto-oncogene, tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-10]
33. drgx ENSDARG00000069329 610 0.955 - - - - - 0.955 - - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
34. wu:fd58b11 wu:fd58b11 21 0.943 - - - - - 0.943 - - -
35. arf3b ENSDARG00000036998, ENSDARG00000112366 38 0.943 - - - - - 0.943 - - - ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
36. rpap2 ENSDARG00000038397 118 0.943 - - - - - 0.943 - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
37. robo2 ENSDARG00000014891, ENSDARG00000078366 23 0.943 - - - - - 0.943 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
38. si:ch211-181p13.2 ENSDARG00000096484 94 0.943 - - - - - 0.943 - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
39. chrnb3b ENSDARG00000038508 7 0.943 - - - - - 0.943 - - - cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
40. CR749741.2 CR749741.2 15 0.943 - - - - - 0.943 - - -
41. CR759907.4 CR759907.4 14 0.943 - - - - - 0.943 - - -
42. zgc:171318 zgc:171318 42 0.943 - - - - - 0.943 - - -
43. pcyt1ba ENSDARG00000058162 206 0.941 - - - - - 0.941 - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
44. CR847990.1 CR847990.1 21 0.934 - - - - - 0.934 - - -
45. evx2 ENSDARG00000059255 317 0.932 - - - - - 0.932 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
46. CU179656.1 ENSDARG00000107086 270 0.931 - - - - - 0.931 - - -
47. chst12b ENSDARG00000077198, ENSDARG00000094981 15 0.928 - - - - 0.928 - - - - carbohydrate (chondroitin 4) sulfotransferase 12b [Source:ZFIN;Acc:ZDB-GENE-090312-144]
48. arnt ENSDARG00000021855, ENSDARG00000115999 32 0.928 - - - - 0.928 - - - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
49. si:dkey-85k15.4 ENSDARG00000095047 25 0.926 - - - - 0.926 - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
50. fermt3a fermt3a 56 0.926 - - - - 0.926 - - - -
51. si:ch211-278p9.1 ENSDARG00000087532 18 0.926 - - - - 0.926 - - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
52. hel_dr4 hel_dr4 12 0.925 - - - - 0.925 - - - -
53. ankrd34bb ENSDARG00000061641 23 0.924 - - - - 0.924 - - - - ankyrin repeat domain 34Bb [Source:ZFIN;Acc:ZDB-GENE-060526-101]
54. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 0.922 - - - - 0.922 - - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
55. gabrr2a ENSDARG00000052982 21 0.92 - - - - 0.920 - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
56. TGFBR3L TGFBR3L 16 0.918 - - - - 0.918 - - - -
57. mms19 ENSDARG00000079067 65 0.918 - - - - 0.918 - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
58. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 0.918 - - - - - 0.918 - - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
59. zgc:198419 ENSDARG00000076221 156 0.918 - - - - 0.918 - - - - zgc:198419 [Source:ZFIN;Acc:ZDB-GENE-030131-7540]
60. PDZD4 ENSDARG00000090564 131 0.915 - - - - - 0.915 - - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
61. C21HXorf40A C21HXorf40A 216 0.915 - - 0.915 - - - - - -
62. GPR101 ENSDARG00000039218 157 0.913 - - - - 0.913 - - - - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
63. soul5 ENSDARG00000075015 118 0.912 - - - - 0.912 - - - - heme-binding protein soul5 [Source:ZFIN;Acc:ZDB-GENE-110718-2]
64. KCNS3 KCNS3 82 0.912 - - - - 0.912 - - - -
65. ANK1_1 ANK1_1 507 0.911 - - - - - 0.911 - - -
66. CABZ01062083.1 CABZ01062083.1 40 0.91 - - - - 0.910 - - - -
67. prdm13 ENSDARG00000078701 205 0.909 - - - - - 0.909 - - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
68. serp2 ENSDARG00000094003 64 0.909 - - - - - 0.909 - - - stress-associated endoplasmic reticulum protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-081104-143]
69. matn3a ENSDARG00000069245 2410 0.907 - - - - 0.907 - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
70. RUNDC3A RUNDC3A 204 0.907 - - - - - 0.907 - - -
71. THEM6 ENSDARG00000103914 49 0.906 - - - - - 0.906 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
72. adat1 ENSDARG00000061348 62 0.906 - - - - 0.906 - - - - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
73. TRIM35_11 TRIM35_11 23 0.904 - - 0.904 - - - - - -
74. RFESD ENSDARG00000058725 27 0.903 - - - - 0.903 - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
75. fbxo16 ENSDARG00000033949 35 0.901 - - - - 0.901 - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
76. rac3a ENSDARG00000090062 394 0.901 - - - - - 0.901 - - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
77. NPAS3 ENSDARG00000109820 362 0.9 - - - - 0.900 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
78. sypb ENSDARG00000002230 262 0.898 - - - - - 0.898 - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
79. GADD45G_1 GADD45G_1 236 0.897 - - - - - 0.897 - - -
80. GABRG1 ENSDARG00000101995 201 0.896 - - - - - 0.896 - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
81. mpp2b ENSDARG00000010957 415 0.896 - - - - - 0.896 - - - membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-040704-70]
82. FGD5_1 FGD5_1 8 0.894 - - 0.894 - - - - - -
83. CR749741.5 CR749741.5 6 0.893 - - 0.893 - - - - - -
84. SLC16A1 SLC16A1 37 0.893 - - - - 0.893 - - - -
85. si:dkey-14o18.1 si:dkey-14o18.1 108 0.893 - - 0.893 - - - - - -
86. si:ch73-186j5.2 ENSDARG00000018301 12 0.893 - - 0.893 - - - - - - si:ch73-186j5.2 [Source:ZFIN;Acc:ZDB-GENE-070705-214]
87. trim36 ENSDARG00000062794 785 0.893 - - - - - 0.893 - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
88. cdk20 ENSDARG00000003867 27 0.893 - - 0.893 - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
89. tyrobp ENSDARG00000094894 16 0.893 - - 0.893 - - - - - - TYRO protein tyrosine kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-061130-2]
90. skap1 ENSDARG00000001498, ENSDARG00000114047 55 0.893 - - - - 0.893 - - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
91. CABZ01063402.1 CABZ01063402.1 64 0.893 - - 0.893 - - - - - -
92. IGLON5 ENSDARG00000022176 1353 0.891 - - - - - 0.891 - - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
93. ANKRD52 ANKRD52 78 0.891 - - - - 0.891 - - - -
94. zgc:113227 ENSDARG00000058874 266 0.889 - - - - - - 0.889 - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
95. CU929417.2 CU929417.2 94 0.889 - - - - 0.889 - - - -
96. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 0.889 - - 0.889 - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
97. CCDC84 ENSDARG00000059606 65 0.888 - - - - 0.888 - - - - coiled-coil domain containing 84 [Source:ZFIN;Acc:ZDB-GENE-060929-1174]
98. pex11g ENSDARG00000025559 129 0.888 - - - - 0.888 - - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
99. phyh ENSDARG00000086740 88 0.888 - - 0.888 - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
100. TMEM116 TMEM116 96 0.887 - - - - 0.887 - - - -

There are 851 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA