Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for bckdha

Gene Name Gene ID Reads Annotation
bckdha ENSDARG00000040555, ENSDARG00000111762 7620 branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]










Genes with expression patterns similar to bckdha

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
2. ube2v1 ENSDARG00000041875 5739 2.795 - 0.969 0.870 - - 0.956 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
3. pbxip1b ENSDARG00000011824 3726 2.785 - 0.948 0.899 - - 0.938 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
4. ndufb11 ENSDARG00000043467 7495 2.624 0.733 0.973 - - - - 0.918 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
5. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 2.606 0.753 0.982 - - - - 0.871 - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
6. mcts1 ENSDARG00000025972 4662 2.586 - - 0.936 - - 0.934 0.716 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
7. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 2.511 0.820 - - - - - 0.845 0.846 - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
8. mrpl11 ENSDARG00000013075 2927 2.429 0.775 - - - - - 0.723 0.931 - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
9. ywhae2 ENSDARG00000017014 5105 2.393 0.744 - 0.883 - - - 0.766 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
10. tmed7 ENSDARG00000046022 2435 2.339 0.783 - - - - - 0.723 0.833 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
11. csnk1da ENSDARG00000008370 3469 2.255 0.726 - - - - - 0.709 0.820 - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
12. nop10 ENSDARG00000104227 2463 2.255 0.702 - 0.843 - - - 0.710 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
13. plagx ENSDARG00000036855 3768 1.928 - 0.976 - - - 0.952 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
14. rab5aa ENSDARG00000018602 8947 1.885 - 0.976 0.909 - - - - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
15. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.883 - - - - - 0.950 0.933 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
16. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.882 - 0.972 0.910 - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
17. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.876 - 0.978 - - - - 0.898 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
18. canx ENSDARG00000037488 4328 1.858 - - 0.912 - - 0.946 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
19. CASKIN2_1 CASKIN2_1 2299 1.854 - - - - - 0.935 - 0.919 -
20. phb ENSDARG00000057414 9551 1.837 - - - - - 0.975 0.862 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
21. khdrbs1b ENSDARG00000070475 18157 1.837 - 0.972 - - - 0.865 - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
22. hypk ENSDARG00000059725 20584 1.832 - - - - - 0.911 0.921 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
23. tmem45b ENSDARG00000056239 2395 1.825 - 0.888 0.937 - - - - - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
24. aimp2 ENSDARG00000018903 5797 1.824 - 0.973 - - - - 0.851 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2652]
25. hoxa3a ENSDARG00000103862 2239 1.822 - - - - - 0.933 - 0.889 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
26. gcn1l1 gcn1l1 6031 1.811 - 0.849 - - - 0.962 - - -
27. CABZ01072954.1 CABZ01072954.1 2330 1.803 - - 0.910 - - - - 0.893 -
28. plp1a ENSDARG00000103732 3544 1.802 - 0.969 0.833 - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
29. elavl1 11672 1.799 - 0.974 - - - - - 0.825 - ELAV like RNA binding protein 1, transcript variant X3
30. si:ch211-251b21.1 ENSDARG00000007275 15724 1.798 - 0.970 0.828 - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
31. nfe2l2a ENSDARG00000042824 1707 1.796 - - - - - 0.936 - 0.860 - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
32. glo1 ENSDARG00000068978 1384 1.793 - 0.972 - - - - 0.821 - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
33. CABZ01088039.1 CABZ01088039.1 2482 1.79 - - 0.873 - - 0.917 - - -
34. onecutl ENSDARG00000040253 2143 1.787 - - 0.877 - - - - 0.910 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
35. znf259 znf259 1819 1.783 0.811 0.972 - - - - - - -
36. txn2 ENSDARG00000034777 4071 1.782 - - - - - 0.974 0.808 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
37. mapk3 ENSDARG00000070573 6842 1.782 - - - - - 0.934 - - 0.848 mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
38. AKAP2 AKAP2 4178 1.78 - 0.982 - - - - 0.798 - -
39. rab1ba ENSDARG00000058044 5080 1.778 - - 0.837 - - 0.941 - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
40. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.777 - - - - - 0.930 - 0.847 - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
41. ap2b1 ENSDARG00000035152 2912 1.777 - 0.972 - - - - - 0.805 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
42. stxbp3 ENSDARG00000008142 2604 1.777 - - - - - 0.951 0.826 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
43. mt-nd5 ENSDARG00000063921 21268 1.775 - - - - - 0.902 0.873 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
44. ndufa11 ENSDARG00000042777 2757 1.771 - - - - - 0.965 0.806 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
45. BX324201.1 BX324201.1 3302 1.754 - - - - - 0.964 0.790 - -
46. pank1b ENSDARG00000010098 3202 1.754 - - 0.902 - - - - 0.852 - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
47. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.753 - - - - - 0.936 0.817 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
48. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.752 - - 0.902 - - - 0.850 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
49. pcmt ENSDARG00000015201 5132 1.751 - - - - - 0.942 0.809 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
50. npm1b ENSDARG00000037675 5448 1.747 - 0.969 0.778 - - - - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
51. ddx6 ENSDARG00000061338 2514 1.745 - 0.972 - - - - - 0.773 - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
52. mrp63 mrp63 2500 1.743 - 0.985 - - - - 0.758 - -
53. serpinh1b ENSDARG00000019949 11693 1.739 - 0.980 - - - - 0.759 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
54. tmem33 ENSDARG00000041332 2883 1.734 0.827 - 0.907 - - - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
55. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.734 - - - - - - 0.835 - 0.899 prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
56. casq1b ENSDARG00000018105 2643 1.733 - - - - - 0.956 0.777 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
57. ccng2 ENSDARG00000017602 3141 1.727 0.751 0.976 - - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
58. PROSER1 ENSDARG00000086302 1935 1.725 - - - - - 0.942 - 0.783 - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
59. xylt1 ENSDARG00000061248 2357 1.724 - - 0.888 - - - - 0.836 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
60. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.722 - 0.957 - - - - 0.765 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
61. vrk1 ENSDARG00000018006 1759 1.721 - - 0.899 - - - - 0.822 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
62. eif4h ENSDARG00000042252 6742 1.718 - - - - - - 0.814 0.904 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
63. lpl ENSDARG00000087697 2578 1.715 - - 0.925 - - - 0.790 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
64. serpinf1 ENSDARG00000069048 2083 1.708 - - - - - 0.941 0.767 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
65. si:ch211-207e19.11 si:ch211-207e19.11 9604 1.707 - 0.909 - - - - 0.798 - -
66. fkbp3 ENSDARG00000098059 5428 1.703 - 0.901 - - - - 0.802 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
67. psmb4 ENSDARG00000054696 8100 1.699 - - - - - 0.961 0.738 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
68. CYYR1 ENSDARG00000103783 4107 1.699 - 0.949 - - - - 0.750 - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
69. col4a1 ENSDARG00000055009 3083 1.697 - 0.981 - - - - 0.716 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
70. psmb7 ENSDARG00000037962 11542 1.694 - - 0.851 - - - 0.843 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
71. mrpl41 ENSDARG00000002264 1756 1.692 - - - - - 0.935 0.757 - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
72. arid2 ENSDARG00000007413 4413 1.688 - - 0.852 - - - - 0.836 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
73. chrnd ENSDARG00000019342 2728 1.686 - - - - - 0.950 0.736 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
74. strn3 ENSDARG00000001729 4608 1.686 - - 0.944 - - - 0.742 - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
75. fam192a ENSDARG00000041631 4113 1.685 - 0.974 - - - - 0.711 - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
76. CABZ01076275.1 ENSDARG00000100753 5137 1.684 - - 0.894 - - - 0.790 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
77. tmem55a 1331 1.679 0.773 - - - - - - 0.906 - transmembrane protein 55A
78. mad2l1 ENSDARG00000004713 3398 1.675 0.776 - 0.899 - - - - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
79. usp28 ENSDARG00000008880 1850 1.675 - - - - - 0.938 0.737 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
80. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.67 - - - - - - 0.743 0.927 - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
81. id3 ENSDARG00000054823 3484 1.668 - 0.887 - - - - - 0.781 - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
82. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.668 - - - - - - 0.794 0.874 - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
83. atp5g3a 9539 1.668 - - 0.892 - - - 0.776 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
84. RNF5 ENSDARG00000075606 1730 1.665 0.742 - - - - - - 0.923 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
85. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.665 - - 0.885 - - - - 0.780 - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
86. rhebl1 ENSDARG00000039162 3966 1.664 - - - - - 0.945 0.719 - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
87. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.663 - 0.844 - - - - 0.819 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
88. ndufv2 ENSDARG00000013044 3758 1.662 - - - - - 0.935 0.727 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
89. fam76b ENSDARG00000012432 2722 1.661 0.752 - - - - - - 0.909 - family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
90. sh3yl1 ENSDARG00000074393 815 1.661 0.734 - - - - 0.927 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
91. impdh2 ENSDARG00000006900 3197 1.659 - - - - - 0.949 0.710 - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
92. gfer ENSDARG00000070061 1119 1.659 0.839 - 0.820 - - - - - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
93. vapal ENSDARG00000115862 3108 1.656 0.795 - - - - - 0.861 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
94. fkbp14 ENSDARG00000040695 7725 1.652 0.736 - - - - 0.916 - - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
95. rps17 ENSDARG00000104011 27028 1.648 - - - - - 0.934 0.714 - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
96. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 1.644 - - - - - 0.941 0.703 - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
97. ryr1b ENSDARG00000023797 5693 1.64 - - - - - 0.900 0.740 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
98. ptpn21 ENSDARG00000062248 2010 1.639 0.728 - - - - - - 0.911 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
99. pycr1 pycr1 1258 1.637 0.740 - 0.897 - - - - - -
100. timm10 ENSDARG00000069116 4459 1.636 - 0.903 - - - - 0.733 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]

There are 1695 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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