Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bbs1

Gene Name Gene ID Reads Annotation
bbs1 ENSDARG00000075169, ENSDARG00000114301 7 Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]










Genes with expression patterns similar to bbs1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
2. col5a2b ENSDARG00000024847 17 2 - - - - 1.000 - 1.000 - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
3. CABZ01045617.2 CABZ01045617.2 13 1.979 - - - - - - 1.000 0.979 -
4. slc9a3.2 ENSDARG00000036722 31 1.966 - - - - 1.000 - - - 0.966 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
5. BX547934.1 ENSDARG00000097061 35 1.781 - - - - 0.781 - 1.000 - -
6. si:rp71-10g3.1 si:rp71-10g3.1 6 1.75 - - 0.750 - - - 1.000 - -
7. prelp ENSDARG00000070597 99 1.713 - - - 0.713 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
8. IKZF4 ENSDARG00000037068 36 1.66 - - - - 0.818 - 0.842 - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
9. dnm3 dnm3 45 1.644 - - 0.856 - - - 0.788 - -
10. si:ch211-271e10.1 ENSDARG00000095735 15 1.605 - - 0.736 - - - - 0.869 - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
11. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
12. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
13. kif26bb ENSDARG00000024575 18 1 - - - - - - 1.000 - - kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188]
14. TEX11 ENSDARG00000078995 0 1 - - - - - - 1.000 - - testis expressed 11 [Source:ZFIN;Acc:ZDB-GENE-140415-1]
15. olfcd1 ENSDARG00000008095 2 1 - - - - - - 1.000 - - olfactory receptor C family, d1 [Source:ZFIN;Acc:ZDB-GENE-100721-9]
16. ikbkap ikbkap 1 1 - - - - - - 1.000 - -
17. btr27 btr27 0 1 - - - - 1.000 - - - -
18. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - - 1.000 - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
19. il1rapl2 ENSDARG00000037553 9 1 - - - - - - - 1.000 - interleukin 1 receptor accessory protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040219-5]
20. tdrd9 ENSDARG00000013453 22 1 - - - - - - 1.000 - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
21. PTPDC1_1 PTPDC1_1 12 1 - - - - - - 1.000 - -
22. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - - - 1.000 - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
23. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
24. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
25. dpyda dpyda 12 1 - - - - 1.000 - - - -
26. fgf8b ENSDARG00000039615 29 1 - - - - - - 1.000 - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
27. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
28. CABZ01065246.2 CABZ01065246.2 45 1 - - - - - - 1.000 - -
29. ssr1 ENSDARG00000101627 151 1 - - - - - - 1.000 - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
30. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
31. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
32. si:ch211-202h22.9 ENSDARG00000079980 2 1 - - - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
33. hoxc12b ENSDARG00000103133 1290 1 - - - - - - 1.000 - - homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
34. htr5a htr5a 4 1 - - - - 1.000 - - - -
35. ctsa ENSDARG00000098114 2 1 - - - - - - - 1.000 - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
36. tmem54 tmem54 3 1 - - - - 1.000 - - - -
37. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
38. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
39. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
40. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
41. rab44 ENSDARG00000028389 27 1 - - - - - - 1.000 - - RAB44, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040724-117]
42. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
43. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
44. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
45. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
46. si:ch211-238p8.1 si:ch211-238p8.1 1 1 - - - - - - 1.000 - -
47. TTC34 ENSDARG00000091221 3 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
48. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
49. olfcq19 ENSDARG00000068566 0 1 - - - - - - 1.000 - - olfactory receptor C family, q19 [Source:ZFIN;Acc:ZDB-GENE-070705-283]
50. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - - - 1.000 - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
51. CDR2_1 CDR2_1 8 1 - - - - - - 1.000 - -
52. C2CD4C_1 C2CD4C_1 24 1 - - - - - - 1.000 - -
53. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
54. CU326366.2 ENSDARG00000068593 11 1 - - - - 1.000 - - - -
55. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
56. U1_16 U1_16 0 1 - - - - 1.000 - - - -
57. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
58. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
59. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
60. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
61. si:ch73-335m24.2 ENSDARG00000074285 16 1 - - - - - - 1.000 - - si:ch73-335m24.2 [Source:ZFIN;Acc:ZDB-GENE-100922-203]
62. CMA1_8 CMA1_8 10 1 - - - - - - 1.000 - -
63. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
64. ftr43 ENSDARG00000076106 2 1 - - - - - - - 1.000 - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
65. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
66. ENSDARG00000032477 ENSDARG00000032477 18 1 - - - - - - 1.000 - -
67. ca4b ENSDARG00000042293 5 1 - - - - - - 1.000 - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
68. BX119910.3 BX119910.3 7 1 - - - - - - - 1.000 -
69. PLCXD1_3 PLCXD1_3 35 1 - - - - - - 1.000 - -
70. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
71. tnfsf11 ENSDARG00000068141 0 1 - - - - - - 1.000 - - TNF superfamily member 11 [Source:ZFIN;Acc:ZDB-GENE-090805-2]
72. CSF3 CSF3 4 1 - - - - 1.000 - - - -
73. si:dkey-220o10.1 si:dkey-220o10.1 63 1 - - - - - - 1.000 - -
74. si:dkey-113d16.4 si:dkey-113d16.4 1 1 - - - - - - - 1.000 -
75. snx8b ENSDARG00000078057 15 1 - - - - - - 1.000 - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
76. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
77. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
78. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
79. batf ENSDARG00000011818 2 1 - - - - - - 1.000 - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
80. CT573494.2 CT573494.2 58 1 - - - - - - 1.000 - -
81. UNC119 UNC119 104 1 - - - - 1.000 - - - -
82. KRT9 KRT9 7 1 - - - - 1.000 - - - -
83. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - 1.000 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
84. si:ch211-93e11.8 ENSDARG00000075022 5 1 - - - - - - 1.000 - - si:ch211-93e11.8 [Source:ZFIN;Acc:ZDB-GENE-121214-283]
85. chia.3 ENSDARG00000009612 14 1 - - - - - - 1.000 - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
86. ft2 ENSDARG00000109567 5 1 - - - - - - 1.000 - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
87. ptk2.2 ptk2.2 3 1 - - - - 1.000 - - - -
88. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
89. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
90. mcf2a ENSDARG00000022895 26 1 - - - - - - 1.000 - - MCF.2 cell line derived transforming sequence a [Source:ZFIN;Acc:ZDB-GENE-030616-52]
91. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
92. lrrc3 ENSDARG00000078415 0 1 - - - - - - 1.000 - - leucine rich repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-080327-13]
93. pglyrp2 ENSDARG00000062998 11 1 - - - - - - 1.000 - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
94. TMEM136 TMEM136 13 1 - - - - - - 1.000 - -
95. si:ch211-207c6.14 si:ch211-207c6.14 19 1 - - - - - - 1.000 - -
96. HTRA2_7 HTRA2_7 1 1 - - - - - - - 1.000 -
97. FP074874.2 ENSDARG00000105724 107 1 - - - - - - 1.000 - -
98. si:dkey-233h12.1 si:dkey-233h12.1 1 1 - - - - - - - 1.000 -
99. gabrr2b ENSDARG00000014057 9 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
100. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 - - - - - - 1.000 - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]

There are 559 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA