Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for bbox1

Gene Name Gene ID Reads Annotation
bbox1 ENSDARG00000036135, ENSDARG00000113482 74 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 [Source:ZFIN;Acc:ZDB-GENE-050417-218]










Genes with expression patterns similar to bbox1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bbox1 ENSDARG00000036135, ENSDARG00000113482 74 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 [Source:ZFIN;Acc:ZDB-GENE-050417-218]
2. mir148 75 1.695 - - - 0.790 0.905 - - - - microRNA 148
3. si:ch211-231i17.5 si:ch211-231i17.5 154 1.681 - - 0.800 - - - 0.881 - -
4. ficd ENSDARG00000035595 129 1.65 - - - - 0.734 - 0.916 - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
5. slc30a4 ENSDARG00000007180 158 1.647 - - 0.775 - - - 0.872 - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
6. FAM35A FAM35A 1091 1.622 - - - - - 0.852 0.770 - -
7. FBXO4 ENSDARG00000074170 54 1.613 - - - - - - 0.902 0.711 - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
8. cbln4 ENSDARG00000061240 67 1.604 - - - - - 0.740 0.864 - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
9. si:dkey-15h8.15 ENSDARG00000102601 335 1.55 - - 0.735 - - - 0.815 - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
10. ldhd ENSDARG00000038845 110 1.548 - - - - 0.751 0.797 - - - lactate dehydrogenase D [Source:ZFIN;Acc:ZDB-GENE-030131-6140]
11. GAS2L1 ENSDARG00000078803 315 1.547 - - - - - 0.774 0.773 - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
12. casp8ap2 ENSDARG00000022718 523 1.542 - - - - - 0.768 0.774 - - caspase 8 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030826-8]
13. alg14 ENSDARG00000103093, ENSDARG00000114160, ENSDARG00000116808 95 1.539 - - 0.714 - - 0.825 - - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-041010-195]
14. prrg4 ENSDARG00000030753 1008 1.528 - - - - - 0.776 0.752 - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
15. gltpa ENSDARG00000061921 429 1.424 - - - - - 0.707 0.717 - - glycolipid transfer protein a [Source:ZFIN;Acc:ZDB-GENE-060526-266]
16. si:dkey-200l5.4 ENSDARG00000095294 13 0.969 - - - - 0.969 - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
17. ORC2 ENSDARG00000101465 399 0.967 - - - - - - 0.967 - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
18. U2_4 U2_4 41 0.963 - - - - - - 0.963 - -
19. lsm1 ENSDARG00000043177 767 0.96 - - - - - - 0.960 - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
20. PARP12 PARP12 77 0.958 - - - - - - 0.958 - -
21. TULP1 TULP1 50 0.956 - - - - 0.956 - - - -
22. slmapb ENSDARG00000020764, ENSDARG00000117032 112 0.945 - - - - - - 0.945 - - sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]
23. LRRC10B 94 0.941 - - - - - - 0.941 - - leucine rich repeat containing 10B
24. dnajb1b ENSDARG00000041394 25 0.936 - - - - 0.936 - - - - DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
25. si:ch211-14g4.4 si:ch211-14g4.4 6 0.936 - - - - 0.936 - - - -
26. il1b ENSDARG00000098700 27 0.936 - - - - 0.936 - - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
27. ZC2HC1C ENSDARG00000070526 14 0.936 - - - - 0.936 - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
28. CR391924.1 CR391924.1 5 0.936 - - - - 0.936 - - - -
29. fto ENSDARG00000044216 33 0.936 - - - - 0.936 - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
30. tecpr1a ENSDARG00000062515 7 0.936 - - - - 0.936 - - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
31. si:ch211-250c4.5 ENSDARG00000075943 10 0.936 - - - - 0.936 - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
32. CABZ01041860.1 CABZ01041860.1 4 0.936 - - - - 0.936 - - - -
33. CRFA31.2 CRFA31.2 12 0.936 - - - - 0.936 - - - -
34. zbtb16a ENSDARG00000007184 6 0.935 - - - - 0.935 - - - - zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989]
35. si:ch211-195i24.1 si:ch211-195i24.1 10 0.935 - - - - 0.935 - - - -
36. or115-6 ENSDARG00000044337 5 0.935 - - - - 0.935 - - - - odorant receptor, family F, subfamily 115, member 6 [Source:ZFIN;Acc:ZDB-GENE-070806-8]
37. CR392354.1 CR392354.1 20 0.934 - - - - 0.934 - - - -
38. tmem168b ENSDARG00000062168 17 0.934 - - - - 0.934 - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
39. zgc:152968 ENSDARG00000037002 6 0.933 - - - - 0.933 - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
40. limk1b ENSDARG00000003022 172 0.933 - - - - - - 0.933 - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
41. fbxw10 ENSDARG00000086484 11 0.933 - - - - 0.933 - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
42. NUMA1_3 NUMA1_3 5 0.933 - - - - 0.933 - - - -
43. l3mbtl1b ENSDARG00000074346 120 0.932 - - - - - - 0.932 - - l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
44. LYPLAL1 ENSDARG00000088764 87 0.932 - - - - 0.932 - - - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
45. her7 ENSDARG00000017917 53 0.93 - - - - 0.930 - - - - hairy and enhancer of split related-7 [Source:ZFIN;Acc:ZDB-GENE-000427-6]
46. osgin2 ENSDARG00000040302 45 0.93 - - - - 0.930 - - - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
47. tnfsf10l3 ENSDARG00000032746 37 0.93 - - - - 0.930 - - - - tumor necrosis factor (ligand) superfamily, member 10 like 3 [Source:ZFIN;Acc:ZDB-GENE-070606-1]
48. si:dkey-202i12.5 si:dkey-202i12.5 20 0.929 - - - - 0.929 - - - -
49. zgc:165481 ENSDARG00000060092 95 0.929 - - - - 0.929 - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
50. flh flh 47 0.929 - - - - 0.929 - - - -
51. CABZ01102038.1 ENSDARG00000116210 132 0.928 - - - - - - 0.928 - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
52. gb:bc139653 gb:bc139653 239 0.927 - - - - - - 0.927 - -
53. spi1a ENSDARG00000067797 113 0.927 - - - - - - 0.927 - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
54. CU183952.1 CU183952.1 32 0.925 - - - - 0.925 - - - -
55. rictora ENSDARG00000100867 20 0.925 - - - - 0.925 - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
56. robo2 ENSDARG00000014891, ENSDARG00000078366 23 0.924 - - - - 0.924 - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
57. lrrc34 ENSDARG00000062235 23 0.921 - - - - 0.921 - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
58. map4k2l_1 map4k2l_1 77 0.921 - - - - 0.921 - - - -
59. msgn1 ENSDARG00000070546 188 0.921 - - - - 0.921 - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
60. drc1 ENSDARG00000042182 39 0.92 - - - - 0.920 - - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
61. BX004880.2 BX004880.2 83 0.918 - - - - - - 0.918 - -
62. si:ch211-147d7.5 ENSDARG00000095457 132 0.917 - - - - - 0.917 - - - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
63. fosb ENSDARG00000055751 170 0.917 - - 0.917 - - - - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
64. dmbx1b ENSDARG00000002510 351 0.916 - - - - - - 0.916 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
65. si:ch73-196i15.3 ENSDARG00000094281 1005 0.915 - - - - 0.915 - - - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
66. cyp46a2 cyp46a2 38 0.915 - - - - - - 0.915 - -
67. SLC9A3R2 SLC9A3R2 55 0.915 - - - - - - 0.915 - -
68. nkx1.2la ENSDARG00000006350 76 0.914 - - - - 0.914 - - - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
69. uts1 ENSDARG00000014927 35 0.912 - - 0.912 - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
70. CABZ01046432.1 ENSDARG00000079325 11 0.912 - - - - - - 0.912 - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
71. ssbp3a ENSDARG00000058237 87 0.909 - - - - - - 0.909 - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
72. UIMC1_1 UIMC1_1 430 0.909 - - - - - - 0.909 - -
73. SLC2A4RG SLC2A4RG 47 0.907 - - 0.907 - - - - - -
74. il6r ENSDARG00000104474 150 0.906 - - - - - - 0.906 - - interleukin 6 receptor [Source:ZFIN;Acc:ZDB-GENE-080107-7]
75. plcd1a ENSDARG00000059123 46 0.905 - - - - - - 0.905 - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
76. map1lc3c ENSDARG00000100528 31 0.905 - - - - - - 0.905 - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
77. atp1a1a.2 ENSDARG00000007739 121 0.905 - - - - - - 0.905 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
78. BX548000.1 ENSDARG00000099044 45 0.905 - - - - - - 0.905 - -
79. slc17a9b ENSDARG00000011049 231 0.904 - - - - - - 0.904 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
80. si:dkey-56e3.3 ENSDARG00000075194 491 0.904 - - - - - - 0.904 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
81. NAV1 NAV1 23 0.904 - - - - 0.904 - - - -
82. hist2h3c_1 ENSDARG00000094154 45 0.902 - - - - - - 0.902 - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
83. slco1c1 ENSDARG00000016749 30 0.902 - - - - - - 0.902 - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
84. rln1 ENSDARG00000103762 8 0.902 - - - - - - 0.902 - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]
85. AL935186.3 ENSDARG00000109223 19 0.902 - - - - - - 0.902 - -
86. fstl3 ENSDARG00000025670 41 0.902 - - - - - - 0.902 - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
87. uckl1a ENSDARG00000001686 21 0.902 - - - - - - 0.902 - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
88. BRD8 ENSDARG00000055999 34 0.902 - - - - - - 0.902 - - bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]
89. Mar-03 Mar-03 44 0.902 - - - - - - 0.902 - -
90. si:ch211-286b5.9 ENSDARG00000086166 27 0.902 - - - - - - 0.902 - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
91. trpc5a ENSDARG00000070504 5 0.902 - - - - - - 0.902 - - transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]
92. pde4cb ENSDARG00000002411 63 0.902 - - - - - - 0.902 - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
93. f7i ENSDARG00000075827 4 0.902 - - - - - - 0.902 - - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
94. CU467646.1 ENSDARG00000075090 27 0.902 - - - - - - 0.902 - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
95. si:ch73-70k4.1 ENSDARG00000075915 69 0.902 - - - - - - 0.902 - - si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
96. si:dkeyp-46h3.3 ENSDARG00000092887 11 0.902 - - - - - - 0.902 - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
97. utp3 ENSDARG00000056720 922 0.901 - - - - - - 0.901 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
98. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.901 - - - - 0.901 - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
99. bcl7ba ENSDARG00000111877 3696 0.9 - - - - - - 0.900 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
100. GPR158 GPR158 64 0.899 - - - - 0.899 - - - -

There are 681 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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