Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for basp1

Gene Name Gene ID Reads Annotation
basp1 ENSDARG00000053358, ENSDARG00000110677 2590 brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]










Genes with expression patterns similar to basp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
2. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.638 - - - - - 0.791 - 0.851 0.996 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
3. lhx1a ENSDARG00000014018 958 2.513 0.825 - - - - 0.803 - 0.885 - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
4. olfm1b ENSDARG00000014053 1392 2.49 0.752 - - - - 0.898 - 0.840 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
5. CABZ01072954.1 CABZ01072954.1 2330 2.486 0.791 - - - - 0.836 - 0.859 -
6. cadpsb ENSDARG00000070567 458 2.467 0.830 - - - - 0.818 - 0.819 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
7. stmn1b ENSDARG00000033655 9491 2.444 0.912 - - - - 0.800 - 0.732 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
8. tox ENSDARG00000032317 9126 2.427 0.843 - - - - 0.802 - 0.782 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
9. khsrp ENSDARG00000026489 15738 2.427 0.778 - - - - 0.851 - 0.798 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
10. hoxa5a ENSDARG00000102501 1667 2.424 0.736 - - - - 0.736 - - 0.952 homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
11. PTS ENSDARG00000045269 2185 2.423 0.741 - - - - - 0.981 0.701 - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
12. kif5aa ENSDARG00000098936 2428 2.407 0.735 - - - - 0.859 - 0.813 - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
13. hmgb1b ENSDARG00000030479 10398 2.397 0.724 - - - - 0.822 - 0.851 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
14. tmpob ENSDARG00000022978 8121 2.337 0.707 - - - - 0.800 - 0.830 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
15. tuba8l3 ENSDARG00000070155 7525 2.324 0.764 - - - - 0.754 0.806 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
16. hoxc4a ENSDARG00000070338 1382 2.318 0.718 - - - - 0.886 - 0.714 - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
17. hdac1 ENSDARG00000015427 19804 2.298 0.733 - - - - 0.777 - 0.788 - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
18. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.291 0.735 - 0.704 - - 0.852 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
19. nusap1 ENSDARG00000002403 6953 2.268 0.731 - - - - 0.806 - 0.731 - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
20. CABZ01088039.1 CABZ01088039.1 2482 2.249 - 0.762 0.703 - - - 0.784 - -
21. wdr82 ENSDARG00000014083 3159 1.973 - - - - - - 0.978 - 0.995 WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
22. zc3h18 ENSDARG00000062506 1676 1.973 - - - - - - 0.984 - 0.989 zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
23. srm ENSDARG00000055760 6572 1.957 - - - - - - 0.974 - 0.983 spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
24. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.949 - - - - - - 0.968 - 0.981 solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
25. ENSDARG00000058255 ENSDARG00000058255 1715 1.912 - - - - - - 0.918 - 0.994
26. nova1 ENSDARG00000020178 4129 1.884 - - 0.976 - - 0.908 - - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
27. zgc:77262 ENSDARG00000044545 5563 1.847 - - - - - - - 0.851 0.996 zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
28. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.832 - - - - - 0.852 0.980 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
29. cadm1a ENSDARG00000031075 2484 1.816 - - - - - - 0.971 0.845 - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
30. erh ENSDARG00000032866 20633 1.814 - - - - - - 0.846 - 0.968 enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
31. plxna4 ENSDARG00000019328 782 1.812 - - - - - 0.825 0.987 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
32. negr1 ENSDARG00000021607 1051 1.809 0.961 - - - - 0.848 - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
33. tuba1c ENSDARG00000055216 8384 1.807 0.902 - - - - 0.905 - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
34. adam11 ENSDARG00000079204 298 1.805 0.910 - - - - 0.895 - - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
35. JPH3 ENSDARG00000102204 283 1.804 0.940 - - - - 0.864 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
36. scrt2 ENSDARG00000056175 4331 1.803 0.916 - - - - 0.887 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
37. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.803 0.925 - - - - 0.878 - - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
38. rabggtb ENSDARG00000068587 1935 1.797 - - - - - - 0.968 0.829 - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
39. kmt2a ENSDARG00000004537 2169 1.797 - - - - - 0.834 0.963 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
40. myo1c myo1c 4978 1.796 - - - - - - 0.813 - 0.983
41. gpm6bb ENSDARG00000001676 2005 1.793 0.882 - - - - - - 0.911 - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
42. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.791 - - 0.928 - - 0.863 - - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
43. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.789 - - - - - - 0.956 0.833 - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
44. rbfox3 rbfox3 1443 1.788 0.916 - - - - 0.872 - - -
45. MAPK8IP1_1 MAPK8IP1_1 186 1.787 0.924 - - - - 0.863 - - -
46. AL844567.1 AL844567.1 1605 1.787 - - - - - 0.800 0.987 - -
47. gap43 ENSDARG00000099744 4114 1.785 0.897 - - - - 0.888 - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
48. cux2a 493 1.785 0.810 - - - - - 0.975 - - cut-like homeobox 2a
49. vamp1 ENSDARG00000031283 3094 1.781 0.887 - - - - 0.894 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
50. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.78 0.855 - - - - 0.925 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
51. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1.779 - - - - - - 0.977 0.802 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
52. gfap ENSDARG00000025301 5584 1.777 0.894 - - - - 0.883 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
53. mapta ENSDARG00000089314 2038 1.768 0.783 - - - - - 0.985 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
54. nefma ENSDARG00000021351 790 1.766 0.898 - - - - 0.868 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
55. vgll4b ENSDARG00000103730 5266 1.764 - - 0.979 - - - - 0.785 - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
56. snap25a ENSDARG00000020609 4537 1.764 0.871 - - - - 0.893 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
57. vsnl1a ENSDARG00000023228 1584 1.762 0.902 - - - - 0.860 - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
58. sncb ENSDARG00000104945 8197 1.76 0.846 - - - - 0.914 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
59. hmgb3a ENSDARG00000056725 15668 1.759 0.841 - - - - 0.918 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
60. setbp1 ENSDARG00000093799 4499 1.756 - - 0.953 - - 0.803 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
61. sp1 ENSDARG00000088347 1697 1.754 - - - - - - 0.941 0.813 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
62. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.753 0.877 - - - - 0.876 - - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
63. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.751 - - - - - - 0.964 0.787 - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
64. dpysl3 ENSDARG00000002587 4381 1.751 0.877 - - - - 0.874 - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
65. mrps7 ENSDARG00000101622 889 1.748 - - - - - - 0.983 0.765 - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
66. slc1a3a ENSDARG00000104431 9888 1.747 0.849 - - - - 0.898 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
67. nova2 ENSDARG00000017673 7685 1.742 0.871 - - - - 0.871 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
68. TNRC6C_2 TNRC6C_2 2444 1.742 - - - - - 0.804 - 0.938 -
69. si:dkey-25e11.10 si:dkey-25e11.10 955 1.741 0.874 - - - - 0.867 - - -
70. mapk12b ENSDARG00000006409 2246 1.74 0.971 - - - - 0.769 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
71. plekhh1 ENSDARG00000053835 2123 1.737 - - - - - - 0.980 0.757 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
72. plp1a ENSDARG00000103732 3544 1.736 0.916 - - - - 0.820 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
73. slc17a6b ENSDARG00000041150 823 1.735 0.866 - - - - 0.869 - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
74. uhrf1 ENSDARG00000103409 3282 1.735 0.749 - - - - - 0.986 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
75. mllt11 ENSDARG00000071026 2518 1.731 0.827 - - - - 0.904 - - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
76. grin1a ENSDARG00000027828 1327 1.729 0.815 - - - - 0.914 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
77. dnm1l ENSDARG00000015006 1729 1.728 - - - - - - 0.962 0.766 - dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
78. amph ENSDARG00000007663 599 1.724 0.912 - - - - 0.812 - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
79. EPB41L1 EPB41L1 1896 1.722 0.882 - - - - 0.840 - - -
80. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.721 0.832 - - - - - 0.889 - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
81. atp6v0a1b ENSDARG00000015174 1052 1.721 - - - - - 0.873 - 0.848 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
82. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.72 - 0.728 - - - - - - 0.992 BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
83. elavl1 11672 1.72 - - - - - 0.823 - 0.897 - ELAV like RNA binding protein 1, transcript variant X3
84. tmeff1b ENSDARG00000056740 11253 1.719 - - - - - 0.905 - 0.814 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
85. igsf9a ENSDARG00000075864 1870 1.718 0.898 - - - - 0.820 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
86. adcyap1b ENSDARG00000027740 1539 1.714 0.825 - - - - 0.889 - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
87. CABZ01044136.1 CABZ01044136.1 2596 1.714 - - - - - - - 0.720 0.994
88. rab3ab ENSDARG00000043835 1267 1.713 0.830 - - - - 0.883 - - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
89. pcdh1gc5 ENSDARG00000104826 10052 1.712 0.816 - - - - 0.896 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
90. ARHGAP22 ENSDARG00000076434 1406 1.71 0.859 - - - - 0.851 - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
91. dpysl5a ENSDARG00000011141 1827 1.709 0.817 - - - - 0.892 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
92. si:dkey-235d18.5 ENSDARG00000039652 667 1.709 - 0.789 - - - - 0.920 - - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
93. snrnp70 ENSDARG00000077126 5921 1.708 - - - - - 0.728 0.980 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
94. tmem35 ENSDARG00000052567 5685 1.707 0.876 - - - - 0.831 - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
95. ago3b ENSDARG00000063079 1441 1.707 - 0.714 - - - - - - 0.993 argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
96. lfng ENSDARG00000037879 11783 1.706 0.828 - - - - 0.878 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
97. cpsf1 ENSDARG00000034178 2036 1.705 - - - - - 0.714 0.991 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
98. rac3b ENSDARG00000020795 1523 1.704 - - - - - 0.724 0.980 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
99. slc32a1 ENSDARG00000059775 1092 1.704 0.831 - - - - 0.873 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
100. gbas gbas 735 1.702 - - 0.720 - - - 0.982 - -

There are 1981 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA