Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for bap1

Gene Name Gene ID Reads Annotation
bap1 ENSDARG00000063051 4973 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) [Source:ZFIN;Acc:ZDB-GENE-050208-492]










Genes with expression patterns similar to bap1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. bap1 ENSDARG00000063051 4973 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) [Source:ZFIN;Acc:ZDB-GENE-050208-492]
2. KAT5 KAT5 623 1.536 - 0.772 - - - - 0.764 - -
3. gtdc2 gtdc2 523 1.517 0.752 - - - - 0.765 - - -
4. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 1.514 - - - - - 0.715 0.799 - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
5. get4 ENSDARG00000024398 1818 1.499 - 0.701 - - - - 0.798 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
6. ngdn ENSDARG00000045372 782 1.489 - 0.719 - - - - 0.770 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
7. stambpb ENSDARG00000086906 265 1.478 - 0.718 - - - - 0.760 - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
8. ttc26 ENSDARG00000012039 505 1.439 - - - 0.712 - - 0.727 - - tetratricopeptide repeat domain 26 [Source:ZFIN;Acc:ZDB-GENE-041212-41]
9. STARD7 ENSDARG00000074858 889 1.413 - - - - - 0.701 0.712 - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
10. nupr1 6040 1 - - - - - - - - 1.000 nuclear protein 1
11. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1 - - - - - - - - 1.000 THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
12. TMEM261 TMEM261 6529 1 - - - - - - - - 1.000
13. CU856140.1 CU856140.1 4316 1 - - - - - - - - 1.000
14. socs5a ENSDARG00000100717 6927 1 - - - - - - - - 1.000 suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
15. ube2ka ENSDARG00000089055 5300 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2Ka (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050320-48]
16. prickle1b ENSDARG00000045694 7536 1 - - - - - - - - 1.000 prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
17. notch1b ENSDARG00000052094 7874 1 - - - - - - - - 1.000 notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
18. flna ENSDARG00000074201 26242 0.999 - - - - - - - - 0.999 filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
19. tmed10 ENSDARG00000041391, ENSDARG00000110672 23599 0.999 - - - - - - - - 0.999 transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
20. col4a5 ENSDARG00000052063 19251 0.998 - - - - - - - - 0.998 collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
21. COX5B_1 ENSDARG00000015978 57225 0.995 - - - - - - - - 0.995 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
22. gars ENSDARG00000059070 17015 0.994 - - - - - - - - 0.994 glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
23. pvalb4 ENSDARG00000024433 35736 0.979 - - - - - - - - 0.979 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
24. cfl1 ENSDARG00000021124 78399 0.968 - - - - - - - - 0.968 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
25. col1a1b ENSDARG00000035809 88057 0.936 - - - - - - - - 0.936 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
26. lig3 ENSDARG00000052553 2665 0.919 - - - - - - 0.919 - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
27. ppiaa ENSDARG00000009212 290634 0.912 - - - - - - - - 0.912 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
28. wdr45 ENSDARG00000090219 829 0.906 - - - - - - 0.906 - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
29. rpl18a ENSDARG00000025073 170983 0.905 - - - - - - - - 0.905 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
30. CDC42BPA CDC42BPA 295 0.895 - - - - - - 0.895 - -
31. tbrg1 ENSDARG00000074996 733 0.889 - - - - - - 0.889 - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
32. scaf4b ENSDARG00000018854 734 0.887 - - - - - - 0.887 - - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
33. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 0.878 - - - - - - 0.878 - - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]
34. si:dkey-238o14.9 si:dkey-238o14.9 303 0.875 - - - - - - 0.875 - -
35. pld2 ENSDARG00000034262 952 0.874 - - - - - - 0.874 - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
36. ighmbp2 ENSDARG00000069274, ENSDARG00000113605 60 0.867 - - - - - - 0.867 - - immunoglobulin mu DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-258]
37. qser1 ENSDARG00000074750 597 0.865 - - - - - - 0.865 - - glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
38. cept1b ENSDARG00000021177 675 0.859 - - - - - - 0.859 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
39. MTFMT ENSDARG00000005448 189 0.858 - - - - - - 0.858 - - mitochondrial methionyl-tRNA formyltransferase [Source:ZFIN;Acc:ZDB-GENE-060929-120]
40. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 0.858 - - - - - - 0.858 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
41. mirlet7i 192 0.85 - - - - - - 0.850 - - microRNA let-7i
42. slc25a47a ENSDARG00000059923 1285 0.844 - - - - - - 0.844 - - solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
43. SLC35A3 SLC35A3 832 0.842 - - - - - - 0.842 - -
44. znrf1 ENSDARG00000020475 303 0.841 - - - - - 0.841 - - - zinc and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1905]
45. rad21b ENSDARG00000035655 87 0.84 - - - - - - 0.840 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
46. STK31 ENSDARG00000056339 37 0.839 - - - - - - 0.839 - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
47. dgcr14 1608 0.837 - - - - - - 0.837 - - DiGeorge syndrome critical region gene 14
48. prpsap2 ENSDARG00000019326 1463 0.836 - - - - - - 0.836 - - phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
49. si:dkey-97l20.5 si:dkey-97l20.5 33 0.836 - - - - - - 0.836 - -
50. SLC41A2 SLC41A2 202 0.835 - - - - - - 0.835 - -
51. CCDC117 CCDC117 412 0.833 - - - - - - 0.833 - -
52. THEM4 ENSDARG00000061621 364 0.832 - - - - - - 0.832 - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
53. mcmbp ENSDARG00000055314 731 0.832 - - - - - 0.832 - - - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
54. cbx2 ENSDARG00000044938 1576 0.832 - - - - - - - 0.832 - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
55. vps13d ENSDARG00000017986 183 0.828 - - - - - - 0.828 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
56. ppp2r3b ENSDARG00000076004 951 0.828 - - - - - - 0.828 - - protein phosphatase 2, regulatory subunit B'', beta [Source:ZFIN;Acc:ZDB-GENE-070912-268]
57. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.827 - - - - - - 0.827 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
58. mak16 ENSDARG00000003527 519 0.827 - - - - - - 0.827 - - MAK16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-35]
59. poglut1 ENSDARG00000053463 738 0.827 - - - - - - 0.827 - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
60. snx18b ENSDARG00000044246, ENSDARG00000110012 51 0.825 - - - - - - 0.825 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
61. st3gal3a ENSDARG00000015374 2360 0.825 - - - - - 0.825 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
62. si:ch211-283g2.1 ENSDARG00000046091 123 0.824 - - - - - 0.824 - - - si:ch211-283g2.1 [Source:ZFIN;Acc:ZDB-GENE-060531-57]
63. wdr75 ENSDARG00000040730 1247 0.822 - - - - - - 0.822 - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
64. TSHZ2 ENSDARG00000079201 301 0.822 - - - - - - 0.822 - - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
65. soga1 ENSDARG00000063075 1066 0.821 - - - - - - 0.821 - - suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
66. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 0.821 - - - - - - 0.821 - - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
67. cry1b cry1b 152 0.82 - - - - - - 0.820 - -
68. mtrf1l ENSDARG00000060005 177 0.82 - - - - - - 0.820 - - mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
69. dynlt1 ENSDARG00000045909 2451 0.819 - - - - - - 0.819 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
70. DDX24 ENSDARG00000104708 861 0.818 - - - - - - 0.818 - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
71. ENSDARG00000023499 ENSDARG00000023499 395 0.817 - - - - - - - 0.817 -
72. rbm28 ENSDARG00000025332 2685 0.816 - - - - - - 0.816 - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
73. CABZ01072607.1 ENSDARG00000113761 784 0.816 - - - - - - 0.816 - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
74. narf ENSDARG00000024184, ENSDARG00000110086 240 0.815 - - - - - - 0.815 - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
75. rasgrp4 ENSDARG00000061796 134 0.815 - - - - - - 0.815 - - RAS guanyl releasing protein 4 [Source:ZFIN;Acc:ZDB-GENE-050419-110]
76. iqce ENSDARG00000089930 163 0.815 - - - - - - 0.815 - - IQ motif containing E [Source:ZFIN;Acc:ZDB-GENE-090312-217]
77. oxnad1 ENSDARG00000062664 2684 0.814 - - - - - - 0.814 - - oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
78. xrcc1 ENSDARG00000009494 1346 0.814 - - - - - - - 0.814 - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
79. zgc:193790 ENSDARG00000102033 167 0.814 - - - - - - 0.814 - - zgc:193790 [Source:ZFIN;Acc:ZDB-GENE-080723-55]
80. ube2d3 ENSDARG00000038473 4096 0.813 - - - - - 0.813 - - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
81. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 0.813 - - - - - - 0.813 - - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
82. ttyh3b ENSDARG00000007678 537 0.813 - - - - - - 0.813 - - tweety family member 3b [Source:ZFIN;Acc:ZDB-GENE-051120-105]
83. morc2 ENSDARG00000028539 3259 0.813 - - - - - - - 0.813 - MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
84. cdipt ENSDARG00000070686 1318 0.812 - - - - - - 0.812 - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
85. SLC5A6 SLC5A6 179 0.81 - - - - - - 0.810 - -
86. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 0.809 - - - - - - 0.809 - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
87. slc7a10b ENSDARG00000051730 44 0.809 - - - - - - 0.809 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
88. TMEM74 26 0.809 - - - - - - 0.809 - - transmembrane protein 74, transcript variant X3
89. wrap53 ENSDARG00000086150 975 0.809 - - - - - - 0.809 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
90. si:ch211-224l10.4 ENSDARG00000088762 36 0.809 - - - - - - 0.809 - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
91. phax ENSDARG00000044298 2302 0.809 - - - - - 0.809 - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
92. spef2 ENSDARG00000098330 59 0.809 - - - - - - 0.809 - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
93. tnmd ENSDARG00000052615 42 0.809 - - - - - - 0.809 - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
94. bmp7a ENSDARG00000018260 92 0.808 - - - - - - 0.808 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
95. CABZ01032467.1 CABZ01032467.1 400 0.806 - - - - - - 0.806 - -
96. cox8a ENSDARG00000095273 60672 0.805 - - - - - - - - 0.805 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
97. CR855996.2 ENSDARG00000104450 310 0.805 - - - - - - 0.805 - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
98. SDK2 SDK2 145 0.804 - - - - - 0.804 - - -
99. ipo7 ENSDARG00000035751 7095 0.804 - - - - - 0.804 - - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
100. fam213b ENSDARG00000029795 387 0.803 - - - - - - 0.803 - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]

There are 614 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA