Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for banf1

Gene Name Gene ID Reads Annotation
banf1 ENSDARG00000037009 16466 barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]










Genes with expression patterns similar to banf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. banf1 ENSDARG00000037009 16466 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
2. rnps1 ENSDARG00000116743 9994 3.334 - 0.850 - 0.942 0.815 0.727 - - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
3. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.482 0.738 - - 0.977 - - - 0.767 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
4. sepw2a 8597 2.382 0.764 - - - - - 0.748 0.870 - selenoprotein W, 2a
5. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.248 - - - - 0.794 0.732 - 0.722 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
6. skib ENSDARG00000008034 6518 1.94 - - 0.957 0.983 - - - - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
7. foxp4 ENSDARG00000076120 9458 1.796 - - - 0.966 - - 0.830 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
8. gmds ENSDARG00000026629 3976 1.769 - - - 0.978 - - 0.791 - - GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
9. rbb4l ENSDARG00000015208 5542 1.766 0.787 - - 0.979 - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
10. ing4 ENSDARG00000030716 5908 1.69 - - 0.944 - - - - 0.746 - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
11. shfm1 7620 1.685 - - - 0.975 0.710 - - - - split hand/foot malformation (ectrodactyly) type 1
12. notch1b ENSDARG00000052094 7874 1.685 - - - 0.978 - - - 0.707 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
13. ndufs2 ENSDARG00000007526 6516 1.683 - - - 0.974 - 0.709 - - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
14. UBE2QL1 ENSDARG00000079276 3474 1.681 0.731 - 0.950 - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
15. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.676 - 0.728 0.948 - - - - - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
16. ssr2 ENSDARG00000005230 31940 1.674 - - 0.719 0.955 - - - - - signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
17. rbm8a ENSDARG00000016516 8789 1.674 - - 0.950 - - - - - 0.724 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
18. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.661 0.718 - - 0.943 - - - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
19. si:ch211-51e12.7 ENSDARG00000045914 9598 1.657 0.816 0.841 - - - - - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
20. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.642 0.753 - - - - - 0.889 - - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
21. fstl1b ENSDARG00000039576 15992 1.633 - - 0.805 - - - 0.828 - - follistatin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3029]
22. srsf6b ENSDARG00000016783 9926 1.621 - - - - 0.741 - - 0.880 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
23. ACVR2B 6615 1.616 0.729 - 0.887 - - - - - - activin A receptor, type IIB
24. eif5a2 ENSDARG00000056186 43804 1.611 - - 0.722 0.889 - - - - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
25. histh1l ENSDARG00000035519 12293 1.604 - 0.834 - - - - 0.770 - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
26. eif3ba ENSDARG00000059654 22960 1.589 - - - - - 0.748 0.841 - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
27. ube2e3 ENSDARG00000012244 8909 1.587 - - - - - 0.779 0.808 - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
28. hnrnpa0a ENSDARG00000089302 45675 1.585 0.735 - - - - - 0.850 - - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
29. zgc:158409 zgc:158409 21963 1.56 - - 0.704 - - - 0.856 - -
30. ssbp3b ENSDARG00000030155 7163 1.558 0.724 - - - - - - 0.834 - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
31. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.554 0.715 - - - - - 0.839 - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
32. mdka ENSDARG00000036036 23084 1.546 - - - - 0.735 - 0.811 - - midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
33. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.543 0.836 - - - - - - - 0.707 myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
34. cct5 ENSDARG00000045399 11572 1.54 - - - 0.803 - 0.737 - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
35. rsl24d1 ENSDARG00000040439 13537 1.524 0.808 - - - - - - - 0.716 ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
36. rpl13 ENSDARG00000099380 20663 1.523 - - - - - 0.778 0.745 - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
37. ddx5 ENSDARG00000038068 35302 1.52 - - - - - 0.720 0.800 - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
38. prmt1 ENSDARG00000010246 11311 1.515 0.737 - - - - - - 0.778 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
39. kdm1a ENSDARG00000060679 6152 1.509 0.733 - - - - - - 0.776 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
40. pcbp2 ENSDARG00000099039 4248 1.494 0.778 - - - - - 0.716 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
41. cdca7a ENSDARG00000077620 9345 1.491 - - - - - - 0.718 - 0.773 cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
42. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.468 - - - - 0.752 0.716 - - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
43. tma7 ENSDARG00000071670 13372 1.464 - - - - 0.763 0.701 - - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
44. srsf5a ENSDARG00000029818 15600 1.459 0.701 - - - - 0.758 - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
45. ENDOD1_5 ENDOD1_5 8723 1.458 0.716 - - - 0.742 - - - -
46. hnrnpub ENSDARG00000004735 16496 1.455 0.749 - - - - - - 0.706 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
47. wu:fk48d07 wu:fk48d07 13245 1.443 0.714 - - - - - 0.729 - -
48. prpf8 ENSDARG00000026180 7026 1.438 - - - - 0.718 - 0.720 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
49. MKI67 ENSDARG00000091150 11038 1.425 0.723 - - - - 0.702 - - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
50. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.424 - - - - - - 0.711 0.713 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
51. glrx ENSDARG00000028106 16225 1.418 - 0.707 - - - - 0.711 - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
52. sf3b1 ENSDARG00000056138 5785 1.416 - - - - 0.702 0.714 - - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
53. nipblb ENSDARG00000061052 6109 0.984 - - - 0.984 - - - - - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
54. acadsb ENSDARG00000076780 2382 0.983 - - - 0.983 - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
55. tspan5a ENSDARG00000086033 1865 0.983 - - - 0.983 - - - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
56. wu:fe05a04 ENSDARG00000087530 843 0.983 - - - 0.983 - - - - - wu:fe05a04 [Source:ZFIN;Acc:ZDB-GENE-030131-4873]
57. dctd ENSDARG00000036990 2168 0.983 - - - 0.983 - - - - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
58. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.983 - - - 0.983 - - - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
59. ing5b ENSDARG00000068175 2502 0.983 - - - 0.983 - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
60. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.983 - - - 0.983 - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
61. ZNF337_6 ZNF337_6 898 0.983 - - - 0.983 - - - - -
62. gpsm1a ENSDARG00000092517 784 0.983 - - - 0.983 - - - - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
63. pou6f1 ENSDARG00000011570 1501 0.983 - - - 0.983 - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
64. MARK4 ENSDARG00000024966 3377 0.983 - - - 0.983 - - - - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
65. nucb2b ENSDARG00000036291 911 0.983 - - - 0.983 - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
66. GUSB ENSDARG00000063126 2712 0.983 - - - 0.983 - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
67. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 0.983 - - - 0.983 - - - - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
68. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.983 - - - 0.983 - - - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
69. plxna1 plxna1 1357 0.983 - - - 0.983 - - - - -
70. agxt2 ENSDARG00000100709 799 0.983 - - - 0.983 - - - - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
71. yme1l1a ENSDARG00000075192 2634 0.983 - - - 0.983 - - - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
72. pnn ENSDARG00000015851 1269 0.983 - - - 0.983 - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
73. kctd10 ENSDARG00000017115 1659 0.983 - - - 0.983 - - - - - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
74. ak2 ENSDARG00000005926 7598 0.983 - - - 0.983 - - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
75. PACS1 PACS1 2061 0.983 - - - 0.983 - - - - -
76. rps8a ENSDARG00000055996 2785 0.982 - - - 0.982 - - - - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
77. camk2n1a ENSDARG00000025855 1467 0.982 - - - 0.982 - - - - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
78. ric8b ENSDARG00000005972, ENSDARG00000116212 1119 0.982 - - - 0.982 - - - - - RIC8 guanine nucleotide exchange factor B [Source:ZFIN;Acc:ZDB-GENE-030131-6435]
79. RTKN RTKN 1537 0.982 - - - 0.982 - - - - -
80. CR382363.1 ENSDARG00000097381 1637 0.982 - - - 0.982 - - - - -
81. fam96b 2255 0.982 - - - 0.982 - - - - - family with sequence similarity 96, member B
82. scrt2 ENSDARG00000056175 4331 0.982 - - - 0.982 - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
83. ell2 ENSDARG00000006251 2895 0.981 - - - 0.981 - - - - - elongation factor, RNA polymerase II, 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1717]
84. dlg5a ENSDARG00000074059 1834 0.981 - - - 0.981 - - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
85. mir203a 1519 0.981 - - - 0.981 - - - - - microRNA 203a
86. kdm2aa ENSDARG00000059653 2389 0.981 - - - 0.981 - - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
87. cenpe ENSDARG00000063385 4428 0.981 - - - 0.981 - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
88. ensab ENSDARG00000061644 2436 0.981 - - - 0.981 - - - - - endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
89. atp6v1c1a ENSDARG00000023967 4611 0.981 - - - 0.981 - - - - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
90. ADAM22 ENSDARG00000060532 2259 0.981 - - - 0.981 - - - - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
91. rpa2 ENSDARG00000037188 4284 0.98 - - - 0.980 - - - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
92. seh1l ENSDARG00000004280 2915 0.98 - - - 0.980 - - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
93. EEF1E1 ENSDARG00000071774 3806 0.979 - - - 0.979 - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
94. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 0.979 - - - 0.979 - - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
95. itgav ENSDARG00000006314 4277 0.978 - - - 0.978 - - - - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
96. sptbn2 ENSDARG00000053956 8452 0.978 - - - 0.978 - - - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
97. aass ENSDARG00000051816 3795 0.978 - - - 0.978 - - - - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
98. nop58 ENSDARG00000104353 8497 0.978 - - - 0.978 - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
99. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 0.977 - - - 0.977 - - - - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
100. ndrg3a ENSDARG00000013087 5581 0.976 - - - 0.976 - - - - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]

There are 484 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA