Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atxn1b

Gene Name Gene ID Reads Annotation
atxn1b ENSDARG00000060862 345 ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]










Genes with expression patterns similar to atxn1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atxn1b ENSDARG00000060862 345 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
2. entpd3 ENSDARG00000035309 263 2.587 0.875 0.895 - - - 0.817 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
3. ksr2 ENSDARG00000094526 134 2.566 - 0.901 - - - 0.846 - 0.819 - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
4. SLC36A4 ENSDARG00000039661 175 2.56 0.853 0.877 - - - 0.830 - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
5. GPR156 ENSDARG00000086215 126 2.417 - 0.746 - - - 0.881 - 0.790 - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
6. sprb ENSDARG00000058553 1694 2.307 0.872 0.714 - - - 0.721 - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
7. crfb6 1137 2.198 0.782 - - - - 0.705 - - 0.711 cytokine receptor family member b6
8. pcdh2ab7 7 2 1.000 1.000 - - - - - - - protocadherin 2 alpha b 7
9. si:dkey-122c11.4 si:dkey-122c11.4 13 2 1.000 1.000 - - - - - - -
10. ptf1a ENSDARG00000014479 349 2 1.000 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
11. tecrl2 tecrl2 11 2 1.000 1.000 - - - - - - -
12. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 2 1.000 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
13. ABCA7 ABCA7 12 2 1.000 1.000 - - - - - - -
14. HIST1H2BA ENSDARG00000116654 10 2 1.000 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
15. syt9b ENSDARG00000029239 31 1.905 0.905 1.000 - - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
16. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1.898 - 1.000 - - - 0.898 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
17. lrrc4bb ENSDARG00000014792 47 1.889 1.000 0.889 - - - - - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
18. zgc:113307 ENSDARG00000044894 17 1.866 - 1.000 - - - 0.866 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
19. CLDN20 26 1.864 - 1.000 - - - 0.864 - - - claudin 20, transcript variant X2
20. SNORA38 SNORA38 574 1.861 1.000 0.861 - - - - - - -
21. BX470254.1_1 ENSDARG00000097402 50 1.853 1.000 - - - - 0.853 - - -
22. htr3a ENSDARG00000089212 51 1.853 - 1.000 - - - 0.853 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
23. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.849 - 1.000 - - - 0.849 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
24. CT025910.1 CT025910.1 143 1.84 - 1.000 - - - 0.840 - - -
25. her3 ENSDARG00000076857 131 1.84 - 1.000 - - - 0.840 - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
26. TRPC4_1 TRPC4_1 212 1.837 - 1.000 - - - 0.837 - - -
27. bdnf ENSDARG00000018817 193 1.831 - 1.000 - - - - - 0.831 - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
28. PLCXD1_3 PLCXD1_3 35 1.827 - 1.000 - - - 0.827 - - -
29. KCNG2 ENSDARG00000035961 58 1.821 0.821 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
30. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.818 - 1.000 - - - 0.818 - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
31. KCNS3 KCNS3 82 1.817 - 1.000 - - - 0.817 - - -
32. tmem91 ENSDARG00000068456 81 1.814 - 1.000 - - - 0.814 - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
33. lingo1a ENSDARG00000034165 179 1.814 - 1.000 - - - 0.814 - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
34. slc8a4a ENSDARG00000055154 90 1.81 0.946 - - - - 0.864 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
35. pdia2 ENSDARG00000018263 74 1.807 - 1.000 - - - - - 0.807 - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
36. KCNAB1 KCNAB1 918 1.807 1.000 - - - - - - 0.807 -
37. nrsn1 ENSDARG00000111235 123 1.804 - 0.913 - - - 0.891 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
38. CLSTN2 ENSDARG00000060637 41 1.793 0.793 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
39. KCNAB2 KCNAB2 129 1.79 - 1.000 - - - - - 0.790 -
40. me1 ENSDARG00000053215 107 1.788 1.000 - - - - 0.788 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
41. si:dkeyp-79c2.1 42 1.788 - 1.000 - - - 0.788 - - - si:dkeyp-79c2.1, transcript variant X2
42. tagln3a ENSDARG00000079805 123 1.772 0.772 1.000 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
43. NTRK3 NTRK3 163 1.765 - 1.000 - - - - - 0.765 -
44. ENSDARG00000086878 ENSDARG00000086878 332 1.753 - 0.898 - - - 0.855 - - -
45. myoc ENSDARG00000021789 1631 1.751 0.941 - - - - 0.810 - - - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
46. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 1.751 0.905 - - - - 0.846 - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
47. MAP6 MAP6 643 1.734 - 0.927 - - - 0.807 - - -
48. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.729 - 0.909 - - - - - 0.820 - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
49. CDH8 172 1.726 - 1.000 - - - 0.726 - - - cadherin 8
50. si:ch211-152f6.6 si:ch211-152f6.6 278 1.724 - 0.946 - - - - - 0.778 -
51. nebl ENSDARG00000021200 40 1.723 0.723 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
52. ch25hl2 ENSDARG00000038728 100 1.721 1.000 - 0.721 - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
53. TUBB2A TUBB2A 142 1.716 - 1.000 - - - 0.716 - - -
54. uvrag ENSDARG00000023815 424 1.706 0.870 - - - - 0.836 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
55. si:ch211-218c6.9 si:ch211-218c6.9 40 1.701 - 1.000 - - 0.701 - - - -
56. rad21b ENSDARG00000035655 87 1.688 - - - - - 0.849 - 0.839 - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
57. phactr3a ENSDARG00000058243 150 1.686 0.871 - - - - - - 0.815 - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
58. zgc:175008 zgc:175008 55 1.679 0.871 - - - - - - 0.808 -
59. tat ENSDARG00000069630, ENSDARG00000115252 169 1.677 0.954 - - - - 0.723 - - - tyrosine aminotransferase [Source:ZFIN;Acc:ZDB-GENE-030131-1144]
60. lmx1ba ENSDARG00000104815 376 1.673 - - - - - 0.853 - 0.820 - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
61. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.671 0.801 - - - - 0.870 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
62. CU179656.1 ENSDARG00000107086 270 1.671 0.702 0.969 - - - - - - -
63. tenm1 ENSDARG00000003403 148 1.666 - - - - - 0.841 - 0.825 - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
64. pdcd2l ENSDARG00000002754 417 1.666 - - - - - 0.904 0.762 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
65. wars2 ENSDARG00000011801 134 1.665 - - - - - 0.900 0.765 - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
66. nrxn2a ENSDARG00000061454 291 1.662 - 0.881 - - - 0.781 - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
67. sv2bb ENSDARG00000060711 196 1.656 - 0.822 - - - - - 0.834 - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
68. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.653 - 0.943 - - - 0.710 - - - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
69. CR936200.1 CR936200.1 327 1.652 0.876 - - - - 0.776 - - -
70. tbx15 ENSDARG00000002582 755 1.652 - 0.942 - - - 0.710 - - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
71. slc1a1 ENSDARG00000020212 104 1.651 - - - - - 0.822 - 0.829 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
72. si:dkey-270b7.1 si:dkey-270b7.1 83 1.641 - - - - - 0.833 - 0.808 -
73. si:dkey-245p14.4 ENSDARG00000070320 418 1.638 - 0.825 - - - 0.813 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
74. nin ENSDARG00000060298 1558 1.638 - - - - - 0.852 - 0.786 - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
75. ablim1a ENSDARG00000060149 228 1.637 - - - - - 0.843 - 0.794 - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
76. SLC29A4 ENSDARG00000059690 470 1.635 0.829 - - - - 0.806 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
77. si:ch211-215p11.4 si:ch211-215p11.4 67 1.629 - - - - - 0.832 - 0.797 -
78. tnrc5 412 1.626 - - - - - 0.864 - 0.762 - trinucleotide repeat containing 5
79. iah1 ENSDARG00000015765 326 1.62 - - - - 0.770 0.850 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
80. syt11a ENSDARG00000057913 1145 1.619 - 0.902 - - - 0.717 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
81. LINGO2 LINGO2 300 1.605 - - - - - 0.807 - 0.798 -
82. med24 ENSDARG00000099431 893 1.602 - - - - - 0.868 - 0.734 - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
83. spon2b ENSDARG00000002732 115 1.598 - 0.806 - - - - 0.792 - - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
84. si:dkey-22o22.2 ENSDARG00000102445 149 1.593 0.703 - - - - 0.890 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
85. dtnbb ENSDARG00000013020 280 1.592 - 0.756 - - - 0.836 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
86. KLHL14 ENSDARG00000045275 155 1.591 0.773 - - - - 0.818 - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
87. xpnpep3 ENSDARG00000007916 166 1.59 - - - - - 0.824 - 0.766 - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
88. si:ch211-282k23.2 ENSDARG00000093591 447 1.583 - 0.757 - - - 0.826 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
89. espl1 ENSDARG00000075354 818 1.582 0.705 - - - - 0.877 - - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
90. GRIN2B GRIN2B 140 1.575 0.723 - - - - 0.852 - - -
91. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.575 0.738 0.837 - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
92. sin3aa ENSDARG00000079716 580 1.564 - - - - - - 0.809 0.755 - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
93. cyp51 ENSDARG00000042641 458 1.561 0.754 - - - - 0.807 - - - cytochrome P450, family 51 [Source:ZFIN;Acc:ZDB-GENE-040625-2]
94. PMFBP1 ENSDARG00000101917 292 1.549 - - - - - 0.808 - 0.741 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
95. ttc9b ENSDARG00000068421 251 1.541 - 0.822 - - - 0.719 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
96. syngr1a ENSDARG00000002564 209 1.538 - 0.713 - - - 0.825 - - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
97. zgc:174697 zgc:174697 128 1.537 0.729 - - - - 0.808 - - -
98. CR774186.2 CR774186.2 104 1.537 0.760 - - - - - - 0.777 -
99. si:dkey-114c15.5 ENSDARG00000095150 70 1.537 - 0.704 - - - 0.833 - - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
100. memo1 ENSDARG00000010823 1681 1.536 - - - - - 0.726 - 0.810 - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]

There are 2087 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA