Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atrx

Gene Name Gene ID Reads Annotation
atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]










Genes with expression patterns similar to atrx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
2. IM:7163548 IM:7163548 6540 3.5 - 0.996 - 0.704 0.953 - - 0.847 -
3. ube2i ube2i 13024 3.305 0.906 - - 0.709 - - 0.748 0.942 -
4. CDCA4 ENSDARG00000042319 7918 2.869 - - - - 0.952 - - 0.931 0.986 cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
5. si:dkey-42i9.4 ENSDARG00000008049 4752 2.831 0.919 - - - 0.927 - - - 0.985 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
6. AP3B1 2363 2.774 0.868 - - - 0.936 - - - 0.970 adaptor related protein complex 3 beta 1 subunit
7. ck2a1 ck2a1 3749 2.616 0.894 - - - 0.954 - 0.768 - -
8. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 2.613 - 0.988 - - - 0.785 - 0.840 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
9. ube2e1 ENSDARG00000116649 10656 2.591 0.887 - - 0.718 - - - - 0.986 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
10. pcif1 ENSDARG00000099084 2851 2.587 - - - 0.705 0.959 - - 0.923 - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
11. tmpoa ENSDARG00000007315 3638 2.579 - - - 0.748 0.930 - 0.901 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
12. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.529 - - - 0.824 0.935 - 0.770 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
13. acin1a ENSDARG00000054290 14023 2.525 - - - 0.735 - - 0.855 - 0.935 apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
14. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 2.525 - - - - 0.951 - 0.729 0.845 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
15. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 2.519 - - - - - 0.800 0.741 - 0.978 casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
16. sf1 ENSDARG00000008188 5142 2.503 - - - 0.771 0.964 - 0.768 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
17. uba1 ENSDARG00000037559 11579 2.503 - - - 0.720 - - 0.816 - 0.967 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
18. GCA GCA 5211 2.502 0.814 0.988 - - - - 0.700 - -
19. rbm4.2 ENSDARG00000055080 5241 2.499 0.903 - - 0.701 - - - 0.895 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
20. myeov2 3351 2.485 0.929 - - - - 0.788 0.768 - - myeloma overexpressed 2
21. emc3 ENSDARG00000020607 3406 2.484 - - - - - 0.797 0.740 0.947 - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
22. rbm8a ENSDARG00000016516 8789 2.475 0.877 - - - - - 0.730 0.868 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
23. rrm1 ENSDARG00000014017 7296 2.464 - - 0.875 - - - 0.763 0.826 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
24. snrpb ENSDARG00000011125 11729 2.446 0.785 - - - - 0.711 - 0.950 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
25. spcs1 ENSDARG00000059298 5327 2.435 - - - - 0.950 0.748 0.737 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
26. GATAD2B ENSDARG00000005834 3855 2.421 - - - 0.750 - - 0.721 0.950 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
27. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.416 0.919 - - 0.716 - - 0.781 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
28. txnrd1 11401 2.411 0.903 - - 0.707 - - 0.801 - - thioredoxin reductase 1
29. wu:fq41a10 wu:fq41a10 7009 2.404 0.866 - - 0.827 - - - 0.711 -
30. snrpd3l ENSDARG00000076283 7655 2.4 - 0.922 - 0.708 - 0.770 - - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
31. ssbp4 ENSDARG00000056483 10196 2.388 - - 0.818 0.823 - - 0.747 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
32. bcl11ab ENSDARG00000063153 3032 2.376 - - - 0.830 - - 0.781 0.765 - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
33. usp7 ENSDARG00000073710 7017 2.336 - - - 0.720 - 0.804 0.812 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
34. smg7 ENSDARG00000060767 2759 2.317 - - - 0.768 - 0.804 0.745 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
35. igf2bp1 ENSDARG00000061478 22924 2.31 - - - 0.751 0.779 0.780 - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
36. pitx2 ENSDARG00000036194 2279 1.926 - - - - 0.943 - - - 0.983 paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
37. dpy30 ENSDARG00000004427 7112 1.923 0.928 0.995 - - - - - - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
38. HOMEZ HOMEZ 1824 1.92 0.925 0.995 - - - - - - -
39. ENSDARG00000087348 ENSDARG00000087348 2870 1.878 - 0.993 - - - - - 0.885 -
40. top2a ENSDARG00000024488 4273 1.868 - - - - 0.963 - - 0.905 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
41. si:dkey-153m14.1 si:dkey-153m14.1 4591 1.861 - 0.997 0.864 - - - - - -
42. map2 ENSDARG00000055052 6062 1.86 - 0.995 - - - - - 0.865 - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
43. tead1a ENSDARG00000028159 3574 1.853 - - - - - - - 0.878 0.975 TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
44. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.849 0.898 - - - 0.951 - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
45. spry4 ENSDARG00000068732 2091 1.83 0.902 - - - 0.928 - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
46. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.818 - - - - - - - 0.846 0.972 zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
47. sh3bp5a ENSDARG00000100529 642 1.816 - - - - 0.936 - - 0.880 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
48. arf6b ENSDARG00000052928 4585 1.814 - - - - 0.939 - - 0.875 - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
49. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.806 0.879 - - - 0.927 - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
50. CD99L2 ENSDARG00000056722 5588 1.793 - - - - - - - 0.828 0.965 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
51. ppp1r12a ENSDARG00000010784 4333 1.782 - 0.992 - - - 0.790 - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
52. snrnp27 ENSDARG00000035625 9080 1.782 - - - - 0.941 - - 0.841 - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
53. rnaseh2a ENSDARG00000018891 1979 1.782 - 0.996 - 0.786 - - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
54. atp6v1d ENSDARG00000011175 8331 1.777 - - - - 0.879 - - 0.898 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
55. cpsf3 ENSDARG00000027649 6897 1.769 - 0.971 - 0.798 - - - - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
56. jarid2b ENSDARG00000062268 2206 1.768 - - - 0.843 0.925 - - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
57. atp2b4 5891 1.757 0.896 - - - - - 0.861 - - ATPase, Ca++ transporting, plasma membrane 4
58. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.757 - - - - 0.915 - - 0.842 - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
59. cox14 ENSDARG00000092124 2229 1.744 0.912 - - - - - - 0.832 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
60. eif3c ENSDARG00000016443 18003 1.739 - - - - 0.877 - - 0.862 - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
61. RNF38 ENSDARG00000062055 3901 1.739 - - - - - - 0.770 - 0.969 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
62. cnppd1 ENSDARG00000027078 3778 1.737 - 0.996 - - - - 0.741 - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
63. C2H6orf52 C2H6orf52 2847 1.735 - - - - - 0.822 - 0.913 -
64. farsa ENSDARG00000098825 2813 1.735 0.903 - - - - - - 0.832 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
65. pik3cb ENSDARG00000075253 2075 1.733 - - - - 0.935 - - 0.798 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
66. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.731 - - - - - 0.760 - - 0.971 carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
67. agpat4 ENSDARG00000069044 4487 1.731 0.914 - - - - - - 0.817 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
68. tra2a ENSDARG00000007863 4449 1.73 - - - - 0.963 - 0.767 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
69. tet2 ENSDARG00000076928 2190 1.729 0.916 - - - - - - 0.813 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
70. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 1.726 0.736 0.990 - - - - - - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
71. dnaja2 ENSDARG00000104066 11946 1.725 0.865 - - - - 0.860 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
72. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.724 - - - - 0.928 0.796 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
73. pgam5 ENSDARG00000035608 4044 1.72 - - - - - - 0.798 0.922 - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
74. C6H2orf40 C6H2orf40 4224 1.718 - - - - 0.927 0.791 - - -
75. zgc:123105 ENSDARG00000003127 3061 1.717 - - - - - - 0.740 - 0.977 zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
76. max ENSDARG00000024844 6035 1.717 - - - - - - 0.858 0.859 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
77. CABZ01013938.1 CABZ01013938.1 4497 1.712 - - - - 0.905 - - 0.807 -
78. dctn5 ENSDARG00000003573 1100 1.711 - - - - - - 0.741 - 0.970 dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
79. prdm16 prdm16 1346 1.71 - - - 0.787 - - - 0.923 -
80. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.71 - 0.996 - - - - 0.714 - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
81. ptbp3 ENSDARG00000043757 6760 1.709 0.945 - - - - - 0.764 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
82. pl10 pl10 10795 1.709 - - - - - - 0.726 - 0.983
83. ARSJ ENSDARG00000077590 684 1.709 - - - - - 0.741 - - 0.968 arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
84. metap2b_1 ENSDARG00000102571 5507 1.708 - 0.993 - - - 0.715 - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
85. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.707 - - - 0.758 0.949 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
86. zgc:91910 ENSDARG00000035678 6172 1.705 - 0.997 - - - - 0.708 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
87. epn2 ENSDARG00000008377 5458 1.704 0.913 - - - - 0.791 - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
88. api5 ENSDARG00000033597 6655 1.702 - 0.716 - - - - - - 0.986 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
89. Sep-06 Sep-06 5465 1.702 - - - - - - 0.802 0.900 -
90. zgc:158387 zgc:158387 9147 1.702 0.738 0.964 - - - - - - -
91. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.696 0.924 - - - - - 0.772 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
92. reep3 reep3 2536 1.696 0.912 - - - - - 0.784 - -
93. mrps30 ENSDARG00000104111 2900 1.696 - 0.995 - - - 0.701 - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
94. hnrnpk ENSDARG00000018914 8841 1.694 - - - - 0.938 - 0.756 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
95. fkbp1aa ENSDARG00000022684 74052 1.693 - - - - 0.843 - - - 0.850 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
96. epb41a ENSDARG00000099283 860 1.693 - - - 0.794 - - - 0.899 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
97. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.692 - - - - - 0.805 - 0.887 - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
98. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.69 - - - - - 0.792 - 0.898 - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
99. itsn1 ENSDARG00000000086 684 1.689 0.920 - - - - 0.769 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
100. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.687 0.900 - - - - 0.787 - - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]

There are 1793 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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