Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atrnl1b

Gene Name Gene ID Reads Annotation
atrnl1b ENSDARG00000006420 641 attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]










Genes with expression patterns similar to atrnl1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atrnl1b ENSDARG00000006420 641 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
2. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 2.462 0.751 0.881 - - - - 0.830 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
3. brip1 ENSDARG00000074410, ENSDARG00000113993 501 2.288 - - - 0.723 - 0.710 0.855 - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
4. TTBK2_1 TTBK2_1 649 1.702 0.781 - - 0.921 - - - - -
5. larp7 ENSDARG00000017315 1194 1.698 - - - 0.904 - 0.794 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
6. egr2a ENSDARG00000044098 1101 1.689 0.936 - - 0.753 - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
7. CABZ01073417.1 CABZ01073417.1 232 1.677 - 0.897 - - - - 0.780 - -
8. znf704 ENSDARG00000061718, ENSDARG00000115892 160 1.673 - - - - - 0.842 0.831 - - zinc finger protein 704 [Source:ZFIN;Acc:ZDB-GENE-060503-775]
9. ndst3 ENSDARG00000041776 605 1.669 - - - 0.871 - - 0.798 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
10. snrnp25 ENSDARG00000020363 588 1.663 - - - 0.861 - - 0.802 - - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
11. phf10 ENSDARG00000070084 1210 1.655 - - - 0.742 - - 0.913 - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
12. CR548630.1 CR548630.1 3301 1.631 - - - 0.834 - 0.797 - - -
13. zgc:113276 ENSDARG00000056650 218 1.628 - 0.849 - - - 0.779 - - - zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]
14. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.617 - - - 0.746 - 0.871 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
15. ftr56 ENSDARG00000030954 23 1.616 0.799 - - - - - 0.817 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
16. DENND4B ENSDARG00000102914 1001 1.609 - - - - - 0.791 0.818 - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
17. NHSL1 NHSL1 182 1.601 - - - 0.753 - 0.848 - - -
18. gpr37b ENSDARG00000033296 283 1.597 - - - - - 0.775 0.822 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
19. FAM135B ENSDARG00000105121 207 1.594 0.811 0.783 - - - - - - - family with sequence similarity 135 member B [Source:HGNC Symbol;Acc:HGNC:28029]
20. thraa ENSDARG00000000151 148 1.594 0.755 0.839 - - - - - - - thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
21. CABZ01111990.1 CABZ01111990.1 4374 1.594 - - - - - 0.858 - 0.736 -
22. epha4a ENSDARG00000054454 1501 1.593 - - - - - 0.770 0.823 - - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
23. RPH3A_1 RPH3A_1 399 1.59 0.763 - - - - - 0.827 - -
24. ZNF337_4 ZNF337_4 409 1.589 0.721 - - - - - 0.868 - -
25. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.585 - - - - - 0.850 - 0.735 - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
26. SPTBN4_1 ENSDARG00000092624 473 1.582 - - - 0.743 - 0.839 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
27. PPP1R9B PPP1R9B 855 1.582 - 0.719 - - - 0.863 - - -
28. tjap1 ENSDARG00000010681 457 1.581 - 0.711 - - - - 0.870 - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
29. EOGT ENSDARG00000022853 366 1.572 0.841 - - - - 0.731 - - - EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [Source:ZFIN;Acc:ZDB-GENE-120813-8]
30. syngr3a ENSDARG00000014871 405 1.568 - - - 0.734 - 0.834 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
31. rnf150a ENSDARG00000024827 1903 1.555 - - - 0.711 - - 0.844 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
32. CDK5R1 CDK5R1 562 1.553 - - - 0.727 - 0.826 - - -
33. sprn ENSDARG00000056004 128 1.55 - - - - - 0.776 - 0.774 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
34. pcp4b 1080 1.543 0.815 - - - - 0.728 - - - Purkinje cell protein 4b
35. TMEM218 ENSDARG00000027129 716 1.542 - 0.826 - - - 0.716 - - - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
36. dhx9 ENSDARG00000079725 1241 1.54 - - - 0.813 - 0.727 - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
37. igdcc3 ENSDARG00000075158 1921 1.534 - - - - - 0.831 - - 0.703 immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
38. zbtb20 ENSDARG00000005586 195 1.531 - - - - - 0.794 - 0.737 - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
39. ANK1_1 ANK1_1 507 1.53 - - - 0.719 - 0.811 - - -
40. fbxw2 ENSDARG00000009745 618 1.528 - - - 0.737 - - 0.791 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
41. CR548626.3 CR548626.3 423 1.527 - 0.817 - 0.710 - - - - -
42. git2a ENSDARG00000061915 884 1.523 - 0.713 - - - 0.810 - - - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
43. FNBP4 ENSDARG00000051800 2839 1.512 - - - - - - 0.769 - 0.743 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
44. KLF16 KLF16 3773 1.508 - 0.711 - - - 0.797 - - -
45. BAALC 250 1.503 - 0.770 - - - 0.733 - - - brain and acute leukemia, cytoplasmic
46. dnajc5aa ENSDARG00000042948 2885 1.5 - - - - - 0.793 - - 0.707 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
47. smn1 ENSDARG00000018494 1024 1.498 0.730 - - 0.768 - - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
48. mb21d2a mb21d2a 421 1.498 - - - 0.731 - 0.767 - - -
49. dnajc27 ENSDARG00000070916 530 1.496 - 0.793 - - - 0.703 - - - DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]
50. CU929240.1 ENSDARG00000101648 1866 1.496 - 0.733 - - - - 0.763 - -
51. rnf19b ENSDARG00000060926 157 1.494 - - - - - 0.754 0.740 - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
52. wdhd1 ENSDARG00000015998 775 1.487 - - - 0.714 - - 0.773 - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
53. igsf11 ENSDARG00000109783 520 1.481 - 0.744 - - - 0.737 - - - immunoglobulin superfamily member 11 [Source:ZFIN;Acc:ZDB-GENE-080303-21]
54. LMTK3 LMTK3 222 1.474 - - - - - 0.729 - 0.745 -
55. cep76 ENSDARG00000058319 143 1.461 - 0.710 - 0.751 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
56. u2af1 ENSDARG00000015325 3217 1.457 - 0.743 - - - - - - 0.714 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
57. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.457 - - - - - 0.745 - 0.712 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
58. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.453 - - - - - 0.724 - 0.729 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
59. pdcd4b ENSDARG00000041022, ENSDARG00000111385, ENSDARG00000112429 528 1.448 - - - 0.722 - - 0.726 - - programmed cell death 4b [Source:ZFIN;Acc:ZDB-GENE-030131-9847]
60. nkain1 ENSDARG00000006859 1961 1.448 - - - - - 0.725 - - 0.723 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
61. ppp4r2a ENSDARG00000026540 1782 1.447 - - - - - - 0.736 0.711 - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
62. her4.1 ENSDARG00000056732 1264 1.446 - - - - - 0.722 - 0.724 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
63. si:ch211-10a23.2 ENSDARG00000060656 471 1.445 - - - 0.738 - 0.707 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
64. C12H10orf88 C12H10orf88 449 1.44 - 0.709 - 0.731 - - - - -
65. st18 663 1.419 - - - 0.713 - - - 0.706 - suppression of tumorigenicity 18, zinc finger
66. pou3f2a ENSDARG00000070220 817 1.412 - - - - - 0.702 - 0.710 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
67. zgc:110410 ENSDARG00000055138 67 0.964 0.964 - - - - - - - - zgc:110410 [Source:ZFIN;Acc:ZDB-GENE-050522-465]
68. si:dkey-15h8.15 ENSDARG00000102601 335 0.96 - - - 0.960 - - - - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
69. atp9b ENSDARG00000062521 915 0.946 - - - 0.946 - - - - - ATPase phospholipid transporting 9B [Source:ZFIN;Acc:ZDB-GENE-060503-583]
70. inadl 80 0.937 0.937 - - - - - - - - InaD-like (Drosophila), transcript variant X4
71. gas7a ENSDARG00000074443, ENSDARG00000111294 250 0.92 - - - - - - 0.920 - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
72. grip1 ENSDARG00000015053 1275 0.919 0.919 - - - - - - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
73. dpysl5b ENSDARG00000059311 600 0.918 - - - - - 0.918 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
74. pbx3a ENSDARG00000089262 97 0.913 - - - - - 0.913 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
75. zgc:103759 ENSDARG00000019503 58 0.913 - 0.913 - - - - - - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
76. cep85l ENSDARG00000020777 1121 0.912 - - - 0.912 - - - - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]
77. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.912 - - - - - - 0.912 - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
78. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 0.91 - 0.910 - - - - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
79. GPALPP1 ENSDARG00000058287 1858 0.909 - - - 0.909 - - - - - GPALPP motifs containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-212]
80. sema6dl ENSDARG00000011533 319 0.908 - 0.908 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like [Source:ZFIN;Acc:ZDB-GENE-050417-171]
81. syt11b ENSDARG00000056105 578 0.906 - - - - - 0.906 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
82. hsd11b3a hsd11b3a 1388 0.905 0.905 - - - - - - - -
83. usp54a ENSDARG00000077948, ENSDARG00000112037 406 0.905 - - - - - - 0.905 - - ubiquitin specific peptidase 54a [Source:ZFIN;Acc:ZDB-GENE-090828-2]
84. evlb ENSDARG00000099720 245 0.904 - - - - - 0.904 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
85. TCF24 ENSDARG00000086944 518 0.902 - - - 0.902 - - - - - transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
86. trim33l ENSDARG00000086126 241 0.9 - - - 0.900 - - - - - tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
87. CABZ01038514.1 CABZ01038514.1 724 0.899 - - - 0.899 - - - - -
88. nubp2 ENSDARG00000055653 803 0.898 0.898 - - - - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
89. elavl3 ENSDARG00000014420 8644 0.897 - - - - - 0.897 - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
90. cbx1b ENSDARG00000054442 1206 0.895 - - - 0.895 - - - - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
91. FP102071.1 ENSDARG00000097994 170 0.894 - 0.894 - - - - - - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
92. slc16a9b ENSDARG00000104687 826 0.893 - - - - - - 0.893 - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
93. yjefn3 ENSDARG00000061692 211 0.892 - - - - - - 0.892 - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
94. nhlh2 ENSDARG00000025495 1860 0.891 - - - - - 0.891 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
95. odz4 odz4 822 0.889 - - - - - 0.889 - - -
96. atpaf1 ENSDARG00000042799 1309 0.889 - 0.889 - - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
97. clstn1 ENSDARG00000031720 5286 0.889 - - - - - 0.889 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
98. fabp7b ENSDARG00000034650 397 0.889 - - - 0.889 - - - - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
99. si:ch211-208h1.1 si:ch211-208h1.1 262 0.888 - - - - - - 0.888 - -
100. cap1 ENSDARG00000016350 891 0.885 0.885 - - - - - - - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]

There are 1540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA