Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atpaf2

Gene Name Gene ID Reads Annotation
atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]










Genes with expression patterns similar to atpaf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
2. AL929322.1 AL929322.1 300 1.64 - 0.843 - - - - 0.797 - -
3. pms2 ENSDARG00000075672, ENSDARG00000115929 248 1.624 - - - - - - 0.750 0.874 - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
4. furinb ENSDARG00000070971 213 1.62 - - - 0.817 - - - 0.803 - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
5. mntb ENSDARG00000073988 1023 1.611 - 0.777 - 0.834 - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
6. pphln1 ENSDARG00000045692 1023 1.611 - - - 0.768 - - - 0.843 - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
7. angptl4 ENSDARG00000035859 2701 1.607 - - - - - - 0.752 0.855 - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
8. arvcfb ENSDARG00000061688 2388 1.607 - - - - - - 0.777 0.830 - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
9. pomp ENSDARG00000032296 4439 1.597 - 0.796 - - - - 0.801 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
10. cahz ENSDARG00000011166 5771 1.591 - 0.879 - - - 0.712 - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
11. rnf139 ENSDARG00000036929 494 1.589 0.809 0.780 - - - - - - - ring finger protein 139 [Source:ZFIN;Acc:ZDB-GENE-080401-4]
12. nab2 ENSDARG00000078076 108 1.584 - 0.768 - 0.816 - - - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
13. homer3 homer3 1974 1.578 - 0.764 - - - - 0.814 - -
14. vps13d ENSDARG00000017986 183 1.576 - - - 0.744 - - - 0.832 - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
15. has2 ENSDARG00000036987 349 1.574 - 0.781 - - - - - 0.793 - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
16. CR387996.2 CR387996.2 1272 1.573 - - - 0.740 - - 0.833 - -
17. nudt3a ENSDARG00000016256 2713 1.571 - 0.837 - - - - 0.734 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
18. MRPL52 ENSDARG00000090568 4402 1.565 - 0.790 - - - - 0.775 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
19. PHB2 PHB2 3755 1.563 - 0.839 - - - - 0.724 - -
20. ZNF710 ZNF710 766 1.561 - - - 0.797 - - 0.764 - -
21. sf3b5 ENSDARG00000016855 4015 1.56 - 0.797 - - - - 0.763 - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
22. bend3 ENSDARG00000076903 320 1.56 - - - 0.845 - 0.715 - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
23. rpf2 ENSDARG00000043960 2719 1.56 - 0.740 - - - - 0.820 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
24. trip4 ENSDARG00000098074 79 1.559 - - - 0.835 - - 0.724 - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
25. cx39.9 ENSDARG00000004082 148 1.558 - 0.831 - - - - - - 0.727 connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
26. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 1.557 - - - 0.821 - - 0.736 - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
27. hhipl1 ENSDARG00000062501 210 1.557 - - - 0.823 - 0.734 - - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
28. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.553 - 0.788 - - - - 0.765 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
29. taf5l ENSDARG00000025808 556 1.551 - 0.769 - - - - 0.782 - - TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]
30. enpp5 ENSDARG00000070625 550 1.55 - - - 0.806 - - 0.744 - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
31. THEM4 ENSDARG00000061621 364 1.546 - - - 0.766 - - 0.780 - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
32. hspb11 ENSDARG00000002204 879 1.539 - 0.751 - - - 0.788 - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
33. rnd3a ENSDARG00000076799 4705 1.538 - 0.783 - 0.755 - - - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
34. mtrf1l ENSDARG00000060005 177 1.538 - - - - - - 0.716 - 0.822 mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
35. C25H12orf73 C25H12orf73 2031 1.537 - 0.797 - - - 0.740 - - -
36. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.535 - 0.825 - - - - 0.710 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
37. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 1.534 - - - 0.747 - - 0.787 - - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
38. fam193a ENSDARG00000102787 617 1.534 - - - 0.798 - - 0.736 - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
39. hsd17b10 ENSDARG00000017781 1793 1.533 - 0.796 - - - - 0.737 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
40. cdk2 ENSDARG00000026577 2835 1.525 0.773 - - - - - 0.752 - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
41. ARHGAP32 ARHGAP32 670 1.515 - 0.779 - - - - 0.736 - -
42. gstm gstm 4064 1.513 - 0.732 - - - - 0.781 - -
43. lrrc48 lrrc48 50 1.512 - - - 0.811 - - - - 0.701
44. GRM2 GRM2 372 1.511 - - - 0.731 - 0.780 - - -
45. tcf19l ENSDARG00000040036 369 1.505 - - - - - - 0.767 0.738 - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
46. farsa ENSDARG00000098825 2813 1.504 - 0.793 - - - - 0.711 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
47. ddx49 ENSDARG00000012899 1604 1.504 - 0.778 - - - - 0.726 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
48. erfl3 ENSDARG00000062801 149 1.503 - - - - - 0.712 - 0.791 - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
49. triap1 ENSDARG00000014963 646 1.503 0.722 - - - - - 0.781 - - TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
50. ctnna2 ENSDARG00000024785 968 1.499 - 0.722 - - - - 0.777 - - catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]
51. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 1.499 - 0.700 - - - - 0.799 - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
52. mrpl44 ENSDARG00000094277 1778 1.498 - 0.770 - - - - 0.728 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
53. rfwd2 740 1.49 - - - 0.774 - - 0.716 - - ring finger and WD repeat domain 2, transcript variant X1
54. wrap53 ENSDARG00000086150 975 1.489 - 0.731 - - - - 0.758 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
55. six1a ENSDARG00000039304 1183 1.487 - 0.732 - 0.755 - - - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
56. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.486 - - - - - - 0.741 - 0.745 exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
57. tprg1l ENSDARG00000068149 1605 1.484 - - - 0.776 - - 0.708 - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
58. spag7 ENSDARG00000011555 3224 1.484 - - - - - 0.749 0.735 - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
59. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.481 - 0.712 - - - - 0.769 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
60. hibadhb ENSDARG00000007959 4858 1.476 - - - - - 0.738 0.738 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
61. ndufa5 ENSDARG00000039346 2617 1.475 - 0.725 - 0.750 - - - - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
62. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.47 - 0.765 - - - - 0.705 - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
63. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.47 - 0.740 - - - - 0.730 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
64. uqcrc2a ENSDARG00000014794 3949 1.467 - 0.705 - - - - 0.762 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
65. ICT1 356 1.465 - 0.750 - - - - - 0.715 - immature colon carcinoma transcript 1
66. CASKIN2_1 CASKIN2_1 2299 1.465 - 0.703 - 0.762 - - - - -
67. GPR17 ENSDARG00000062030 713 1.463 - - - - - - 0.748 0.715 - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
68. PLEKHM3 ENSDARG00000030633 496 1.461 - 0.704 - 0.757 - - - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
69. sgsh ENSDARG00000032087 294 1.455 - 0.739 - - - - - 0.716 - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:ZFIN;Acc:ZDB-GENE-030131-4958]
70. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 1.446 0.706 0.740 - - - - - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
71. HPDL ENSDARG00000113721 264 1.443 - 0.713 - - - 0.730 - - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
72. CR855996.2 ENSDARG00000104450 310 1.439 - - - - - - 0.702 - 0.737 ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
73. PPIL3 ENSDARG00000033370 714 1.432 - - - 0.718 - - 0.714 - - peptidylprolyl isomerase (cyclophilin)-like 3 [Source:ZFIN;Acc:ZDB-GENE-040625-159]
74. si:dkey-119m17.2 509 1.431 - 0.704 - - - - 0.727 - - si:dkey-119m17.2, transcript variant X2
75. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.431 - 0.729 - - - - 0.702 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
76. tbl3 ENSDARG00000052344 1530 1.427 - 0.722 - - - - 0.705 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
77. zgc:112998 ENSDARG00000079760 380 1.414 - 0.709 - - - - 0.705 - - zgc:112998 [Source:ZFIN;Acc:ZDB-GENE-050320-134]
78. ATP5J_2 ATP5J_2 2381 0.91 - 0.910 - - - - - - -
79. wdr46_1 ENSDARG00000095879 1291 0.908 - 0.908 - - - - - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
80. ssbp1 ENSDARG00000039350 809 0.905 - 0.905 - - - - - - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
81. ggctb ENSDARG00000005085 704 0.896 - 0.896 - - - - - - - gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
82. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.893 - 0.893 - - - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
83. CR385054.1_1 ENSDARG00000100106 43 0.892 - - - - - - - 0.892 -
84. zcchc14 ENSDARG00000101242 630 0.889 - - - - - - - 0.889 - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
85. stk36 ENSDARG00000061095 113 0.888 - - - - - - - 0.888 - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
86. SLC35A3_1 SLC35A3_1 35 0.887 - - - - - - - 0.887 -
87. CU855931.2 CU855931.2 13 0.887 - - - - - - - 0.887 -
88. si:dkey-148f24.5 si:dkey-148f24.5 7 0.887 - - - - - - - 0.887 -
89. si:dkey-167k11.1 si:dkey-167k11.1 14 0.887 - - - - - - - 0.887 -
90. apnl ENSDARG00000090900 21 0.887 - - - - - - - 0.887 - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
91. bon bon 20 0.887 - - - - - - - 0.887 -
92. CABZ01078944.1 CABZ01078944.1 9 0.887 - - - - - - - 0.887 -
93. si:dkey-152b24.7 ENSDARG00000099715 26 0.887 - - - - - - - 0.887 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
94. gria1b ENSDARG00000032714, ENSDARG00000111658 12 0.886 - - - - - - - 0.886 - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
95. igdcc4 ENSDARG00000076919 1303 0.886 - 0.886 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
96. CU633477.1 CU633477.1 19 0.885 - - - - - - - 0.885 -
97. hbz 327 0.885 - 0.885 - - - - - - - hemoglobin subunit zeta
98. odf3l2 36 0.884 - - - - - - - 0.884 - outer dense fiber of sperm tails 3-like 2
99. FAM124B ENSDARG00000087489 16 0.883 - - - - - - - 0.883 - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
100. si:ch73-222h13.1 ENSDARG00000087107 16 0.883 - - - - - - - 0.883 - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]

There are 1340 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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