Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atpaf1

Gene Name Gene ID Reads Annotation
atpaf1 ENSDARG00000042799 1309 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]










Genes with expression patterns similar to atpaf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atpaf1 ENSDARG00000042799 1309 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
2. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 2.425 - 0.722 0.995 - - - 0.708 - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
3. xirp1 ENSDARG00000030722 1486 2.286 - 0.759 - - - - 0.725 0.802 - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
4. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.755 - 0.759 0.996 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
5. schip1 ENSDARG00000035175 3838 1.738 - - 0.986 - - - 0.752 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
6. rbm8a ENSDARG00000016516 8789 1.728 - - 0.975 - - - 0.753 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
7. ACVR2B 6615 1.692 - 0.766 0.926 - - - - - - activin A receptor, type IIB
8. pa2g4b ENSDARG00000070657 7999 1.688 - 0.742 0.946 - - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
9. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.684 - - 0.912 - - 0.772 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
10. epyc ENSDARG00000056950 7783 1.649 - 0.705 0.944 - - - - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
11. derl1 ENSDARG00000021905 4698 1.648 - - 0.926 - - - 0.722 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
12. hfe2 4113 1.647 - 0.802 - - - - - 0.845 - hemochromatosis type 2
13. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.634 - - 0.907 - - 0.727 - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
14. got2a ENSDARG00000041068, ENSDARG00000114282 693 1.611 - - - - - 0.800 - 0.811 - glutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
15. jph1a ENSDARG00000058603 2852 1.611 - 0.888 - - - 0.723 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
16. CASS4 ENSDARG00000006775 760 1.61 - 0.791 - - - - - 0.819 - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
17. prkcq ENSDARG00000034173 405 1.603 - 0.837 - - 0.766 - - - - protein kinase C, theta [Source:ZFIN;Acc:ZDB-GENE-041210-195]
18. slc43a1b ENSDARG00000037748 1406 1.585 - 0.854 - - - - - 0.731 - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
19. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.584 - 0.828 - - - - - 0.756 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
20. nr1d2b ENSDARG00000009594 1144 1.581 - - - - - - 0.739 0.842 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
21. CU638714.1 ENSDARG00000100303 2132 1.567 - 0.760 - - - - - 0.807 -
22. galnt1 ENSDARG00000061335 1648 1.56 - 0.730 - - - - 0.830 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
23. pes ENSDARG00000018902 3286 1.557 - 0.769 - 0.788 - - - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
24. mfn1b ENSDARG00000079219 1699 1.548 - 0.779 - - - 0.769 - - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
25. CR392006.1 CR392006.1 1401 1.544 0.700 0.844 - - - - - - -
26. dclk2 dclk2 719 1.543 - 0.793 - - 0.750 - - - -
27. PTPLA PTPLA 4044 1.541 0.709 0.832 - - - - - - -
28. mrpl44 ENSDARG00000094277 1778 1.524 - 0.754 - - - - - 0.770 - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
29. pno1 ENSDARG00000008502 4547 1.523 - 0.761 - - - - 0.762 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
30. arpp21 ENSDARG00000061081 892 1.517 0.734 0.783 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
31. b3gnt5a ENSDARG00000018971 938 1.516 - - - - - - 0.734 0.782 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
32. pigo ENSDARG00000011743 928 1.508 - 0.752 - - - 0.756 - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
33. sucla2 ENSDARG00000005359 5992 1.503 0.717 0.786 - - - - - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
34. fsta ENSDARG00000052846, ENSDARG00000113185 539 1.503 - 0.796 - - - 0.707 - - - follistatin a [Source:ZFIN;Acc:ZDB-GENE-990714-11]
35. BX950186.2 BX950186.2 1267 1.499 - - - - - 0.735 - 0.764 -
36. ndufaf4 ENSDARG00000077859 552 1.494 - 0.750 - - - 0.744 - - - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
37. mtif3 ENSDARG00000039649 464 1.493 - 0.702 - - - - - 0.791 - mitochondrial translational initiation factor 3 [Source:ZFIN;Acc:ZDB-GENE-060228-1]
38. apc ENSDARG00000058868 2605 1.493 - 0.748 - - - - 0.745 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
39. fam120c ENSDARG00000019205 1365 1.478 - 0.750 - - - - 0.728 - - family with sequence similarity 120C [Source:ZFIN;Acc:ZDB-GENE-090313-228]
40. enah ENSDARG00000032049 1526 1.475 - 0.720 - - - 0.755 - - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
41. eif3i ENSDARG00000017445 21149 1.474 - - 0.765 - - - 0.709 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
42. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.474 - 0.715 - - - - - 0.759 - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
43. crcp ENSDARG00000069373 730 1.458 - - - - - 0.754 0.704 - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
44. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.453 - 0.730 - - - 0.723 - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
45. C9H2orf15 C9H2orf15 1975 1.45 - - - - - 0.732 0.718 - -
46. ncl ENSDARG00000002710 16951 1.449 - 0.737 - - - 0.712 - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
47. nop56 ENSDARG00000012820 15231 1.444 - 0.714 - - - 0.730 - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
48. gpx7 ENSDARG00000091511 3045 1.428 - 0.709 - - - - 0.719 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
49. rab11fip4b ENSDARG00000103207, ENSDARG00000114706, ENSDARG00000116431 309 1.424 - 0.713 - - - 0.711 - - - RAB11 family interacting protein 4 (class II) b [Source:ZFIN;Acc:ZDB-GENE-080722-8]
50. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.999 - - 0.999 - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
51. taf1b ENSDARG00000028937 879 0.999 - - 0.999 - - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
52. fam102aa ENSDARG00000102566 903 0.999 - - 0.999 - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
53. trim36 ENSDARG00000062794 785 0.999 - - 0.999 - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
54. pih1d2 ENSDARG00000014849 389 0.999 - - 0.999 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
55. PKP3 PKP3 391 0.999 - - 0.999 - - - - - -
56. si:ch73-303g23.4 si:ch73-303g23.4 386 0.999 - - 0.999 - - - - - -
57. acox1 ENSDARG00000014727 660 0.999 - - 0.999 - - - - - - acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
58. si:ch73-7i4.1 ENSDARG00000094554 771 0.999 - - 0.999 - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
59. mfsd11 ENSDARG00000102828 1043 0.998 - - 0.998 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
60. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.998 - - 0.998 - - - - - -
61. LPL_1 LPL_1 1150 0.998 - - 0.998 - - - - - -
62. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.998 - - 0.998 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
63. kifc3 ENSDARG00000054978 1220 0.998 - - 0.998 - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
64. CU638868.1 ENSDARG00000115797 487 0.998 - - 0.998 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
65. ck2b ck2b 781 0.998 - - 0.998 - - - - - -
66. suv420h2 2186 0.998 - - 0.998 - - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
67. C19H1orf85 C19H1orf85 1587 0.998 - - 0.998 - - - - - -
68. tmem223 ENSDARG00000069494 1528 0.998 - - 0.998 - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
69. si:dkey-57a22.11 ENSDARG00000092651 660 0.998 - - 0.998 - - - - - - si:dkey-57a22.11 [Source:ZFIN;Acc:ZDB-GENE-081104-423]
70. zgc:195282 ENSDARG00000079488 475 0.998 - - 0.998 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
71. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.998 - - 0.998 - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
72. si:dkey-94l16.4 ENSDARG00000090142 791 0.998 - - 0.998 - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
73. brms1la ENSDARG00000006235 2011 0.997 - - 0.997 - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
74. TACC2 1702 0.997 - - 0.997 - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
75. PEG3_5 PEG3_5 1624 0.997 - - 0.997 - - - - - -
76. exoc5 ENSDARG00000060323 2450 0.997 - - 0.997 - - - - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
77. abi1b ENSDARG00000062991 1564 0.997 - - 0.997 - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
78. bre bre 1233 0.997 - - 0.997 - - - - - -
79. usp44 ENSDARG00000089861 1532 0.997 - - 0.997 - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
80. dlg1l ENSDARG00000102216 1960 0.997 - - 0.997 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
81. pip5k1aa ENSDARG00000100396 1644 0.996 - - 0.996 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
82. numb ENSDARG00000027279 2905 0.996 - - 0.996 - - - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
83. dhx38 ENSDARG00000100013 1854 0.996 - - 0.996 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
84. sp3b ENSDARG00000007812 2928 0.996 - - 0.996 - - - - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
85. CABZ01013938.1 CABZ01013938.1 4497 0.996 - - 0.996 - - - - - -
86. c8b ENSDARG00000039517 1731 0.996 - - 0.996 - - - - - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
87. jph2 ENSDARG00000028625 6706 0.996 - - 0.996 - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
88. fosl2 ENSDARG00000040623 2041 0.996 - - 0.996 - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
89. syngr2a ENSDARG00000052429 3431 0.995 - - 0.995 - - - - - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
90. ptcd3 ENSDARG00000103856 2107 0.995 - - 0.995 - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
91. plekhh1 ENSDARG00000053835 2123 0.995 - - 0.995 - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
92. coa5 ENSDARG00000094833 1988 0.994 - - 0.994 - - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
93. C3H19orf43 C3H19orf43 2961 0.993 - - 0.993 - - - - - -
94. txnipb ENSDARG00000070000 2365 0.993 - - 0.993 - - - - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
95. hug 4100 0.993 - - 0.993 - - - - - - HuG, transcript variant X2
96. fscn1a ENSDARG00000059680 3999 0.992 - - 0.992 - - - - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
97. MON2 ENSDARG00000099798 2359 0.992 - - 0.992 - - - - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
98. UBE2QL1 ENSDARG00000079276 3474 0.992 - - 0.992 - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
99. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.992 - - 0.992 - - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
100. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.991 - - 0.991 - - - - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]

There are 1036 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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